SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000378-TA|BGIBMGA000378-PA|IPR000697|EVH1
         (779 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17DC0 Cluster: Putative uncharacterized protein; n=1; ...   362   2e-98
UniRef50_P91621 Cluster: Protein still life, isoform SIF type 1;...   293   2e-77
UniRef50_A4QN64 Cluster: Zgc:162320 protein; n=8; Danio rerio|Re...    44   0.021
UniRef50_Q0E8S7 Cluster: CG11324-PC, isoform C; n=6; Diptera|Rep...    37   1.8  
UniRef50_UPI0000DB6D1B Cluster: PREDICTED: similar to homer homo...    36   5.5  
UniRef50_A4TUL1 Cluster: TraI protein; n=2; Magnetospirillum gry...    35   9.6  

>UniRef50_Q17DC0 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 676

 Score =  362 bits (891), Expect = 2e-98
 Identities = 231/528 (43%), Positives = 267/528 (50%), Gaps = 61/528 (11%)

Query: 273 TSEESQATAGSTQH-GQDL-KSEGVQAGGXXXXXXXXXXXXXXGKECSLQHMPKSIDYGD 330
           + +E+ +  G+ Q  G++  KSEG QAGG              G         ++ D+GD
Sbjct: 22  SQDEANSNMGTGQRTGEETSKSEGTQAGGTLQQTERSTKTTSTGTGT------RTKDFGD 75

Query: 331 GNESSRESERXXXXXXXXXXXXXXXXXXXXXXXXXXEDMNMDSSTLKRMLKPMPSTESPV 390
             + SRE                             EDMN+D+ST+KRMLKPMPS ESPV
Sbjct: 76  --DMSREQH------DMHHNIINNNQSARRNKSKSTEDMNVDTSTMKRMLKPMPSAESPV 127

Query: 391 TSPEMGRRRYXXXXXXXXXXXXXXXXXXXXXXXXXXXVVXXXXXXXXXXACVWCRRGVGV 450
           TSPEMGRRRY                            +          +       +G 
Sbjct: 128 TSPEMGRRRYNYYNSATNTPHTHQHPIHNAHMLNNNGTISRNASQSSRFSGSRSSHEIG- 186

Query: 451 GAAPSXXXXXXXXXXXXXXXXDLSPPSDNVMFDNQCYATTPSSSNGNSDQE--PCQRRDP 508
                                + SPPSDNV+FDNQCYATTPSSSNGNSDQ+  P  R+  
Sbjct: 187 RVHQHGPRGLYLELERERSCAEGSPPSDNVIFDNQCYATTPSSSNGNSDQDQPPYGRQGS 246

Query: 509 --RQHHHPKPCLNRXXXXXXXXXXXXXXXXRLLLEYEMHLRNTLAKGMDAESYSLHTFEA 566
               HHH  P                    RLLLEYEMHLRNTLAKGMDAESYSLHTFEA
Sbjct: 247 GRHSHHHQNP--------PNVTPTPGSPTSRLLLEYEMHLRNTLAKGMDAESYSLHTFEA 298

Query: 567 LLSQSMEDLEMNDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXTLPLPHRLGVERQHSARS 626
           LLSQSME+LE+ + +                           TLPLPHRLG ER    R 
Sbjct: 299 LLSQSMENLELAESL-----PGSNQRSPYPIRRRSSASAKSSTLPLPHRLGPERPPQVRE 353

Query: 627 -----DRDGYYSD--XXXXXXXXXXXXXXGYLSDHNTSFVSTSRCASCIGESARAAWYRH 679
                DRDGYYSD                GYLSDHN+++ + +RCASC GESARA W+RH
Sbjct: 354 RDRDRDRDGYYSDRNELIRERERDRDRDRGYLSDHNSNYSAANRCASCTGESARAQWFRH 413

Query: 680 SDGWXXXXXXXXX-------------------XSPWDSLPSLRHEGSLNDSGYRSNRADS 720
           SDGW                             SPWDSLPSLR + SLNDSGY+SNRADS
Sbjct: 414 SDGWRSGSSTFGSGSGPGLVASQSNVAMGGHKRSPWDSLPSLRQDSSLNDSGYKSNRADS 473

Query: 721 FEQRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRICYLTSSE 768
           FEQRGVFDRQDS+RS+Y SDRE  RYGIVQQASIDSTDSR+CYLTSSE
Sbjct: 474 FEQRGVFDRQDSLRSDYMSDRE-PRYGIVQQASIDSTDSRLCYLTSSE 520


>UniRef50_P91621 Cluster: Protein still life, isoform SIF type 1;
           n=7; Endopterygota|Rep: Protein still life, isoform SIF
           type 1 - Drosophila melanogaster (Fruit fly)
          Length = 2072

 Score =  293 bits (718), Expect = 2e-77
 Identities = 136/159 (85%), Positives = 145/159 (91%), Gaps = 5/159 (3%)

Query: 1   MGNKLSSCSCAPILRKAYRYEDSPWQNSRRRDGHLL---RLWAEVFHVSASGAGTVKWQQ 57
           MGNKLS CSCAP++RKAYRYEDSPWQ+SRRRDGHLL   RLWAEVFHVSASGAGTVKWQQ
Sbjct: 1   MGNKLS-CSCAPLMRKAYRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59

Query: 58  VSEDLVPVNITCIQDSPECVFHITAYNSQVDKILDVRLLQPGTRIGQASECFVYWKDPMT 117
           VSEDLVPVNITCIQDSPEC+FHITAYNSQVDKILDVRL+QPGTRIGQASECFVYWKDPMT
Sbjct: 60  VSEDLVPVNITCIQDSPECIFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMT 119

Query: 118 NDTWGLNFTSPIDAKQFRECCFFTSFQLFFNVQNSKAVK 156
           NDTWGLNFTSPIDAKQFRECC   SF+      +S ++K
Sbjct: 120 NDTWGLNFTSPIDAKQFRECC-SPSFKFSRKASSSYSLK 157



 Score =  286 bits (702), Expect = 1e-75
 Identities = 177/324 (54%), Positives = 190/324 (58%), Gaps = 56/324 (17%)

Query: 474 SPPSDNVMFDNQCYATTPSSSNGNSDQEPCQRRD------PRQHHHPKPCLNRXXXXXXX 527
           SPPSDNVMFDNQCYATTPSSSNGNSDQ+    +       P+Q   P    +R       
Sbjct: 504 SPPSDNVMFDNQCYATTPSSSNGNSDQDQSYGQQQSSGQHPQQQQGPPQRSSRHQHHHQQ 563

Query: 528 XXXXXXX----XXRLLLEYEMHLRNTLAKGMDAESYSLHTFEALLSQSMEDLEMNDKMXX 583
                        RLLLEYEMHLRNTLAKGMDAESYSLHTFEALLSQSME+L  N K   
Sbjct: 564 APNVTPTPGSPTSRLLLEYEMHLRNTLAKGMDAESYSLHTFEALLSQSMENL-ANAK--- 619

Query: 584 XXXXXXXXXXXXXXXXXXXXXXXXXTLPLPHR-LGVERQHSARSDRDGYYSDXXXXXXXX 642
                                     LP PHR L   R      DRDGYYSD        
Sbjct: 620 ---------------------SSTLPLP-PHRPLSTIRDKERDRDRDGYYSDRNELIRER 657

Query: 643 XXXXXXGYLSDHNTSFVSTSRCASCIGESARAAWYRHSDGWXXXXXXXXX---------- 692
                 GYLSDHN+SF S SRCASCIGESARA W+RHSDGW                   
Sbjct: 658 ERERDRGYLSDHNSSF-SNSRCASCIGESARAQWFRHSDGWRSGSSTIGSGSGHGMMTQQ 716

Query: 693 -------XSPWDSLPSLRHEGSLNDSGYRSNRADSFEQRGVFDRQDSVRSEYTSDRESSR 745
                   SPWDSLPSLR + SLNDSGY+S RADS EQR  F RQDS+RSEY SDRE SR
Sbjct: 717 IPGSGHKRSPWDSLPSLRQDSSLNDSGYKSARADSLEQRAEFIRQDSLRSEYLSDRE-SR 775

Query: 746 YGIVQQASIDSTDSRICYLTSSEL 769
           YGIVQQASI+STDSR+CYLTSSE+
Sbjct: 776 YGIVQQASIESTDSRMCYLTSSEI 799



 Score = 72.1 bits (169), Expect = 5e-11
 Identities = 32/34 (94%), Positives = 34/34 (100%)

Query: 367 EDMNMDSSTLKRMLKPMPSTESPVTSPEMGRRRY 400
           EDMN+D+STLKRMLKPMPSTESPVTSPEMGRRRY
Sbjct: 387 EDMNVDTSTLKRMLKPMPSTESPVTSPEMGRRRY 420


>UniRef50_A4QN64 Cluster: Zgc:162320 protein; n=8; Danio rerio|Rep:
           Zgc:162320 protein - Danio rerio (Zebrafish)
           (Brachydanio rerio)
          Length = 412

 Score = 43.6 bits (98), Expect = 0.021
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 51  GTVKWQQVSEDLVPVN-ITCIQDSPECVFHITAYNSQVDKILDVRL-LQPGTRIGQASEC 108
           G+ +W         V+ I   Q+S  C F +     Q D+ + +   L  G +  QA+  
Sbjct: 19  GSKRWMPAGSGAQAVSRIHIFQNSSSCSFRVVGRKQQADQQVVINCPLVRGMKYNQATPT 78

Query: 109 FVYWKDPMTNDTWGLNFTSPIDAKQF 134
           F  W+D      WGLNF S  +A QF
Sbjct: 79  FHQWRD--ARQVWGLNFGSKEEASQF 102


>UniRef50_Q0E8S7 Cluster: CG11324-PC, isoform C; n=6; Diptera|Rep:
           CG11324-PC, isoform C - Drosophila melanogaster (Fruit
           fly)
          Length = 459

 Score = 37.1 bits (82), Expect = 1.8
 Identities = 40/184 (21%), Positives = 65/184 (35%), Gaps = 15/184 (8%)

Query: 40  AEVFHVSASGAGTVKWQQVSEDLVPVNITCIQDSPECVFHITAYNSQVDKILDVRLLQPG 99
           A VFH+      T  W  ++  +  VN++   DS   ++ I +      K +    + P 
Sbjct: 11  AHVFHIDPKTKRT--W--ITASMKAVNVSFFYDSSRNLYRIISVEGT--KAVINSTITPN 64

Query: 100 TRIGQASECFVYWKDPMTNDTWGLNFTSPIDAKQFRECCFFTSFQLFFNVQNSKAVKTRI 159
               Q S+ F  W D   N  +GL F S  +  +F E      FQ    V+ +     + 
Sbjct: 65  MTFTQTSQKFGQWSDVRANTVYGLGFASEAELTKFVE-----KFQ---EVKEATKNAMKS 116

Query: 160 YTGSSTLPXXXXXXXXXXXXXXXXXXXXXSDKVAAATSSTSLYDNVTNSQATHQPPPKRK 219
             GS+ +                      +  +   T       N TN+Q  +   P  K
Sbjct: 117 ANGSNAVTPTTSANTSPISGRAVGSMQNDNTAIDPHTVEPPNMSN-TNTQNANPDSPSHK 175

Query: 220 MLNT 223
           +LNT
Sbjct: 176 LLNT 179


>UniRef50_UPI0000DB6D1B Cluster: PREDICTED: similar to homer homolog
           2; n=2; Apocrita|Rep: PREDICTED: similar to homer
           homolog 2 - Apis mellifera
          Length = 331

 Score = 35.5 bits (78), Expect = 5.5
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 40  AEVFHVSASGAGTVKWQQVSEDLVPVNITCIQDSPECVFHITAYNSQVDKILDVRLLQPG 99
           A VFH+        K   VS     V+I+   DS   ++ I +      K +    + P 
Sbjct: 18  AHVFHIDPK----TKRSWVSASTAAVSISFFYDSTRSLYRIISVEGT--KAVINSTITPN 71

Query: 100 TRIGQASECFVYWKDPMTNDTWGLNFTSPIDAKQFRE 136
               + S+ F  W D   N  +GL F+S ++  +F E
Sbjct: 72  MTFTKTSQKFGQWSDVRANTIYGLGFSSEVELGKFIE 108


>UniRef50_A4TUL1 Cluster: TraI protein; n=2; Magnetospirillum
           gryphiswaldense|Rep: TraI protein - Magnetospirillum
           gryphiswaldense
          Length = 590

 Score = 34.7 bits (76), Expect = 9.6
 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 12  PILRKAYRYEDSPWQNSRRRDGHLLRLWAEVFHVSASGAGTVKWQQVSEDLVPVNI 67
           P+ RKA  YE   WQ S  R  H++   AE+  V   GA T  W +V E L P  I
Sbjct: 174 PVSRKARDYEAKTWQQSFER--HVVEHKAEIIKV-IDGATT--WAEVHEGLAPYGI 224


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.128    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,656,677
Number of Sequences: 1657284
Number of extensions: 20177607
Number of successful extensions: 42025
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 42000
Number of HSP's gapped (non-prelim): 17
length of query: 779
length of database: 575,637,011
effective HSP length: 107
effective length of query: 672
effective length of database: 398,307,623
effective search space: 267662722656
effective search space used: 267662722656
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 76 (34.7 bits)

- SilkBase 1999-2023 -