Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000377-TA|BGIBMGA000377-PA|IPR011129|Cold shock protein,
IPR001878|Zinc finger, CCHC-type, IPR002059|Cold-shock protein,
DNA-binding, IPR008994|Nucleic acid-binding, OB-fold
(154 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2LZN5 Cluster: GA14466-PA; n=3; Endopterygota|Rep: GA1... 213 1e-54
UniRef50_Q9VRN5 Cluster: Lin-28 homolog; n=1; Drosophila melanog... 212 3e-54
UniRef50_UPI0000589074 Cluster: PREDICTED: similar to ENSANGP000... 153 2e-36
UniRef50_Q1RLA8 Cluster: Zinc finger protein; n=1; Ciona intesti... 142 3e-33
UniRef50_Q6ZN17 Cluster: Lin-28 homolog B; n=40; Coelomata|Rep: ... 140 2e-32
UniRef50_A3EXS4 Cluster: RNA-binding protein LIN-28-like protein... 138 7e-32
UniRef50_P92186 Cluster: Protein lin-28; n=5; Caenorhabditis|Rep... 114 7e-25
UniRef50_Q4S6T5 Cluster: Chromosome 14 SCAF14723, whole genome s... 109 3e-23
UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella ve... 109 3e-23
UniRef50_Q5CVY2 Cluster: Cold shock RNA binding domain of the OB... 93 2e-18
UniRef50_A1L2L1 Cluster: LOC100036881 protein; n=1; Xenopus laev... 89 5e-17
UniRef50_Q75QN8 Cluster: Cold shock domain protein 3; n=2; Triti... 84 1e-15
UniRef50_O65639 Cluster: Glycine-rich protein; n=8; Magnoliophyt... 83 2e-15
UniRef50_A4RZ32 Cluster: Predicted protein; n=1; Ostreococcus lu... 83 3e-15
UniRef50_Q38896 Cluster: Glycine-rich protein 2b; n=26; cellular... 82 5e-15
UniRef50_A3BPB0 Cluster: Putative uncharacterized protein; n=2; ... 77 2e-13
UniRef50_A4V6J7 Cluster: Y-Box factor protein; n=1; Dugesia japo... 77 2e-13
UniRef50_P41824 Cluster: Y-box factor homolog; n=2; cellular org... 76 3e-13
UniRef50_Q9Y2T7 Cluster: Y-box-binding protein 2; n=21; Tetrapod... 75 7e-13
UniRef50_Q90WH1 Cluster: Cold-shock domain protein; n=1; Oryzias... 75 9e-13
UniRef50_O13015 Cluster: Y box protein 2; n=1; Carassius auratus... 75 9e-13
UniRef50_P16989 Cluster: DNA-binding protein A; n=92; cellular o... 75 9e-13
UniRef50_O62213 Cluster: Putative uncharacterized protein cey-1;... 74 1e-12
UniRef50_Q9ZFK9 Cluster: CspA; n=25; Bacteria|Rep: CspA - Myxoco... 74 2e-12
UniRef50_Q4UBG6 Cluster: Cold shock protein, putative; n=2; Thei... 74 2e-12
UniRef50_P72366 Cluster: Cold shock-like protein cspA; n=29; Bac... 73 2e-12
UniRef50_UPI00005843EB Cluster: PREDICTED: similar to Y-Box fact... 73 3e-12
UniRef50_Q90650 Cluster: Rous sarcoma virus transcription enhanc... 73 3e-12
UniRef50_P91306 Cluster: Y-box protein 2; n=2; Caenorhabditis el... 73 4e-12
UniRef50_P67809 Cluster: Nuclease sensitive element-binding prot... 73 4e-12
UniRef50_Q016S2 Cluster: Putative nucleic acid binding protein; ... 72 5e-12
UniRef50_Q4H2L8 Cluster: Y-box protein 1/2/3; n=2; Ciona intesti... 72 6e-12
UniRef50_P0A975 Cluster: Cold shock-like protein cspE; n=28; Bac... 72 6e-12
UniRef50_Q5JKD6 Cluster: Cold shock domain protein 2-like protei... 71 9e-12
UniRef50_Q013V8 Cluster: Glycogen debranching enzyme; n=1; Ostre... 71 9e-12
UniRef50_Q83RI9 Cluster: Cold shock-like protein cspC; n=38; Gam... 71 9e-12
UniRef50_Q8IT93 Cluster: Y-box protein Ct-p50; n=4; Endopterygot... 71 1e-11
UniRef50_O46173 Cluster: Y-box protein; n=5; cellular organisms|... 70 2e-11
UniRef50_Q08VT0 Cluster: Conserved domain protein; n=2; Bacteria... 70 3e-11
UniRef50_P54584 Cluster: Cold shock protein; n=6; Bacteria|Rep: ... 70 3e-11
UniRef50_A0NEN6 Cluster: ENSANGP00000031633; n=12; cellular orga... 69 6e-11
UniRef50_P0A9Y2 Cluster: Cold shock protein cspA; n=39; Gammapro... 69 6e-11
UniRef50_A5BWB0 Cluster: Putative uncharacterized protein; n=1; ... 68 1e-10
UniRef50_P39818 Cluster: Cold shock-like protein cspJ; n=7; Bact... 68 1e-10
UniRef50_P0A981 Cluster: Cold shock-like protein cspG; n=154; Ba... 68 1e-10
UniRef50_Q74BX3 Cluster: Cold shock domain family protein; n=13;... 67 1e-10
UniRef50_A2A246 Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-... 67 1e-10
UniRef50_Q2JGE4 Cluster: Cold-shock DNA-binding domain protein; ... 67 2e-10
UniRef50_P0A971 Cluster: Cold shock-like protein cspD; n=12; Gam... 67 2e-10
UniRef50_Q5MGM1 Cluster: Putative uncharacterized protein; n=4; ... 66 2e-10
UniRef50_A0YBV1 Cluster: CspA-like protein; n=17; Proteobacteria... 66 3e-10
UniRef50_Q1QAP9 Cluster: Cold-shock DNA-binding domain protein; ... 66 4e-10
UniRef50_P46449 Cluster: Cold shock-like protein cspD; n=31; Bac... 66 4e-10
UniRef50_Q9S1B7 Cluster: Cold shock-like protein cspA; n=10; Bac... 65 6e-10
UniRef50_Q87NH9 Cluster: Cold shock transcriptional regulator Cs... 65 7e-10
UniRef50_Q9ZFK8 Cluster: CspB; n=4; cellular organisms|Rep: CspB... 64 1e-09
UniRef50_P0A353 Cluster: Cold shock-like protein cspA; n=288; Ba... 63 2e-09
UniRef50_Q2J4H7 Cluster: Cold-shock DNA-binding domain protein; ... 63 3e-09
UniRef50_Q9XSU1 Cluster: DNA binding protein; n=3; Amniota|Rep: ... 63 3e-09
UniRef50_P72188 Cluster: Cold shock protein capA; n=23; Proteoba... 63 3e-09
UniRef50_A3VSH0 Cluster: Cold shock protein; n=1; Parvularcula b... 62 5e-09
UniRef50_Q835L0 Cluster: Cold-shock domain family protein; n=24;... 62 7e-09
UniRef50_Q0I3L0 Cluster: Cold shock-like protein; n=2; Proteobac... 61 9e-09
UniRef50_A5ZXC4 Cluster: Putative uncharacterized protein; n=2; ... 61 9e-09
UniRef50_A4BC11 Cluster: Cold shock protein; n=1; Reinekea sp. M... 61 9e-09
UniRef50_P62169 Cluster: Cold shock-like protein cspC; n=26; cel... 61 9e-09
UniRef50_Q1N1Z0 Cluster: Cold shock protein; n=14; Bacteria|Rep:... 61 1e-08
UniRef50_P0A363 Cluster: Cold shock-like protein cspB; n=367; ro... 61 1e-08
UniRef50_Q9I0L6 Cluster: Cold-shock protein CspD; n=12; Gammapro... 60 2e-08
UniRef50_Q0BPU3 Cluster: Cold shock protein; n=1; Granulibacter ... 60 2e-08
UniRef50_A6E2L2 Cluster: Cold-shock DNA-binding domain protein; ... 60 2e-08
UniRef50_Q9AN51 Cluster: ID534; n=52; Bacteria|Rep: ID534 - Brad... 60 2e-08
UniRef50_Q7D268 Cluster: AGR_C_161p; n=7; Proteobacteria|Rep: AG... 60 3e-08
UniRef50_Q2BKV8 Cluster: Cold-shock domain family protein; n=3; ... 60 3e-08
UniRef50_A5NZH6 Cluster: Putative cold-shock DNA-binding domain ... 60 3e-08
UniRef50_A1CFX7 Cluster: Cold shock NA binding domain protein; n... 59 4e-08
UniRef50_Q5FNZ7 Cluster: Cold shock protein; n=1; Gluconobacter ... 59 5e-08
UniRef50_Q4F6X8 Cluster: Cold shock protein; n=6; Gammaproteobac... 58 6e-08
UniRef50_A7DA86 Cluster: Putative cold-shock DNA-binding domain ... 58 6e-08
UniRef50_A4VMZ2 Cluster: Cold shock protein CspA; n=12; Bacteria... 58 8e-08
UniRef50_Q6YPQ4 Cluster: Cold shock protein; n=3; Firmicutes|Rep... 58 1e-07
UniRef50_Q6N3M1 Cluster: Cold shock DNA binding protein; n=78; B... 58 1e-07
UniRef50_P39158 Cluster: Cold shock protein cspC; n=41; Bacteria... 58 1e-07
UniRef50_Q8KES2 Cluster: Cold shock-like protein CspG; n=9; Chlo... 57 1e-07
UniRef50_A0ACJ4 Cluster: Putative DNA-binding protein; n=3; Acti... 57 1e-07
UniRef50_Q9Z3S6 Cluster: Cold shock protein cspA; n=59; Alphapro... 57 1e-07
UniRef50_Q8YIC6 Cluster: COLD SHOCK PROTEIN CSPA; n=4; Brucella|... 57 2e-07
UniRef50_Q2S3Y3 Cluster: 'Cold-shock' DNA-binding domain, putati... 57 2e-07
UniRef50_Q4JMV8 Cluster: Predicted cold shock family protein; n=... 57 2e-07
UniRef50_Q23960 Cluster: Y-box protein; n=2; Dugesia|Rep: Y-box ... 57 2e-07
UniRef50_Q89E28 Cluster: Cold shock protein; n=8; cellular organ... 56 3e-07
UniRef50_Q2S0T4 Cluster: Conserved domain protein; n=2; Bacteroi... 56 3e-07
UniRef50_Q28L70 Cluster: Cold-shock DNA-binding domain protein; ... 56 3e-07
UniRef50_A7HXE8 Cluster: Putative cold-shock DNA-binding domain ... 56 3e-07
UniRef50_UPI00015B4254 Cluster: PREDICTED: similar to Y-box prot... 56 5e-07
UniRef50_Q9ZBH4 Cluster: Putative DNA-binding protein; n=2; Acti... 56 5e-07
UniRef50_Q982F0 Cluster: Cold-shock protein; n=3; Mesorhizobium ... 56 5e-07
UniRef50_Q6N6T9 Cluster: Cold shock DNA binding protein; n=38; A... 56 5e-07
UniRef50_Q2RQP4 Cluster: Cold-shock DNA-binding domain protein; ... 55 6e-07
UniRef50_Q8D046 Cluster: Cold shock protein; n=14; Enterobacteri... 55 6e-07
UniRef50_Q3VJZ1 Cluster: Cold-shock protein, DNA-binding precurs... 55 6e-07
UniRef50_A4LXQ2 Cluster: Cold-shock DNA-binding domain protein; ... 55 6e-07
UniRef50_Q17JD9 Cluster: Putative uncharacterized protein; n=1; ... 55 6e-07
UniRef50_Q9ZCP9 Cluster: Cold shock-like protein cspA; n=12; Bac... 55 6e-07
UniRef50_Q7VLQ6 Cluster: Cold shock-like protein CspD; n=6; Prot... 55 8e-07
UniRef50_Q48H64 Cluster: Cold shock domain protein CspD; n=7; Pr... 55 8e-07
UniRef50_Q1ZKE8 Cluster: Cold shock protein; n=3; Gammaproteobac... 55 8e-07
UniRef50_Q9XTJ6 Cluster: Putative uncharacterized protein cey-4;... 55 8e-07
UniRef50_Q9PA96 Cluster: Temperature acclimation protein B; n=24... 54 1e-06
UniRef50_Q8GI47 Cluster: Cold shock protein homolog; n=5; Deinoc... 54 1e-06
UniRef50_Q5GRS9 Cluster: Cold shock protein; n=3; Wolbachia|Rep:... 54 1e-06
UniRef50_Q0YRJ0 Cluster: Cold-shock protein, DNA-binding; n=1; C... 54 1e-06
UniRef50_Q834D5 Cluster: Cold-shock domain family protein; n=1; ... 53 3e-06
UniRef50_Q5ZWM5 Cluster: Cold shock domain family protein; n=6; ... 53 3e-06
UniRef50_A3J3Q2 Cluster: Cold shock protein; n=7; Flavobacterial... 53 3e-06
UniRef50_UPI00015BD510 Cluster: UPI00015BD510 related cluster; n... 52 4e-06
UniRef50_Q1RHK6 Cluster: Cold shock-like protein cspA; n=2; Rick... 52 4e-06
UniRef50_Q1GQL9 Cluster: Cold-shock DNA-binding domain protein; ... 52 6e-06
UniRef50_A6NIG4 Cluster: Uncharacterized protein ENSP00000367493... 52 6e-06
UniRef50_Q03YA9 Cluster: Cold shock protein; n=1; Leuconostoc me... 52 7e-06
UniRef50_Q9KXN2 Cluster: Cold shock protein B; n=7; Bacteria|Rep... 51 1e-05
UniRef50_Q82ZV8 Cluster: Cold-shock domain family protein; n=7; ... 51 1e-05
UniRef50_Q11D48 Cluster: Cold-shock DNA-binding domain protein; ... 51 1e-05
UniRef50_Q9KI38 Cluster: Ysb; n=2; Agrobacterium tumefaciens|Rep... 51 1e-05
UniRef50_A5ZS66 Cluster: Putative uncharacterized protein; n=1; ... 51 1e-05
UniRef50_Q8G880 Cluster: Cold shock protein; n=3; Bifidobacteriu... 50 2e-05
UniRef50_Q1GHI4 Cluster: Cold-shock DNA-binding domain protein; ... 50 2e-05
UniRef50_A3YG84 Cluster: Cold-shock protein CspD; n=1; Marinomon... 50 2e-05
UniRef50_Q1AWL7 Cluster: Cold-shock DNA-binding domain protein; ... 50 2e-05
UniRef50_Q0SKK0 Cluster: Cold shock protein; n=20; Bacteria|Rep:... 50 2e-05
UniRef50_Q5YVF2 Cluster: Putative cold shock protein; n=1; Nocar... 50 3e-05
UniRef50_Q2RZT3 Cluster: Conserved domain protein; n=2; Saliniba... 50 3e-05
UniRef50_A5V9E9 Cluster: Putative cold-shock DNA-binding domain ... 50 3e-05
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 49 4e-05
UniRef50_A3Y9L0 Cluster: Cold-shock DNA-binding domain protein; ... 49 4e-05
UniRef50_Q3W076 Cluster: Cold-shock DNA-binding domain; n=2; Fra... 49 5e-05
UniRef50_Q0APJ7 Cluster: Cold-shock DNA-binding domain protein; ... 49 5e-05
UniRef50_Q2RNN9 Cluster: Cold-shock DNA-binding domain protein; ... 48 7e-05
UniRef50_Q28PH1 Cluster: Cold-shock DNA-binding domain protein; ... 48 7e-05
UniRef50_A0YCJ0 Cluster: Cold-shock DNA-binding protein; n=1; ma... 48 7e-05
UniRef50_O46363 Cluster: Universal minicircle sequence binding p... 48 7e-05
UniRef50_A4QVX5 Cluster: Putative uncharacterized protein; n=1; ... 48 7e-05
UniRef50_Q1VQ89 Cluster: Cold shock protein; n=8; Bacteroidetes|... 48 9e-05
UniRef50_Q60AQ4 Cluster: Cold shock protein; n=27; Bacteria|Rep:... 48 1e-04
UniRef50_Q1YTJ3 Cluster: Cold shock protein; n=1; gamma proteoba... 48 1e-04
UniRef50_Q0M3I1 Cluster: Cold-shock protein, DNA-binding; n=1; C... 48 1e-04
UniRef50_A6CF18 Cluster: Probable cold shock protein scoF; n=1; ... 48 1e-04
UniRef50_Q1AY27 Cluster: Cold-shock DNA-binding domain protein; ... 47 2e-04
UniRef50_A4FKV9 Cluster: Putative DNA-binding protein; n=1; Sacc... 47 2e-04
UniRef50_A2TNS0 Cluster: Cold shock protein; n=4; Bacteroidetes|... 47 2e-04
UniRef50_Q9HSS3 Cluster: Cold shock protein; n=7; Halobacteriace... 47 2e-04
UniRef50_Q56922 Cluster: Major cold shock protein; n=31; Enterob... 47 2e-04
UniRef50_Q6FAY9 Cluster: Cold shock-like protein; n=44; Bacteria... 47 2e-04
UniRef50_Q2RWM8 Cluster: Cold-shock DNA-binding domain protein; ... 47 2e-04
UniRef50_A4U251 Cluster: Cold shock DNA-binding domain protein; ... 47 2e-04
UniRef50_A0PKE1 Cluster: DNA-binding protein; n=1; Mycobacterium... 47 2e-04
UniRef50_Q339V4 Cluster: Retrotransposon protein, putative, uncl... 47 2e-04
UniRef50_Q4Q1R3 Cluster: Universal minicircle sequence binding p... 47 2e-04
UniRef50_Q48493 Cluster: Major cold shock protein; n=50; Bacteri... 47 2e-04
UniRef50_Q5NP11 Cluster: Cold shock protein; n=1; Zymomonas mobi... 46 3e-04
UniRef50_A0Z255 Cluster: Cold shock protein, CspA family-like pr... 46 3e-04
UniRef50_A2U2L8 Cluster: Cold shock protein; n=3; Bacteroidetes|... 46 4e-04
UniRef50_UPI0000DC0B3F Cluster: UPI0000DC0B3F related cluster; n... 46 5e-04
UniRef50_Q9ZHW6 Cluster: Major cold shock protein; n=8; Bacteria... 46 5e-04
UniRef50_A4A3Y7 Cluster: Cold-shock domain family protein; n=1; ... 46 5e-04
UniRef50_Q4WQJ7 Cluster: Zinc knuckle transcription factor (CnjB... 46 5e-04
UniRef50_A7EHR9 Cluster: Putative uncharacterized protein; n=2; ... 46 5e-04
UniRef50_Q6ALH9 Cluster: Hypothetical cold-shock protein; n=1; D... 45 6e-04
UniRef50_Q5H9Y7 Cluster: P0650D04.15 protein; n=9; Oryza sativa|... 45 6e-04
UniRef50_UPI000050F90E Cluster: COG1278: Cold shock proteins; n=... 45 8e-04
UniRef50_Q5P4M3 Cluster: Probable cold shock family protein; n=1... 45 8e-04
UniRef50_Q1ZUW9 Cluster: Predicted membrane protein; n=3; Vibrio... 45 8e-04
UniRef50_A3YF52 Cluster: Cold-shock protein, DNA-binding; n=2; M... 45 8e-04
UniRef50_Q7ZJ30 Cluster: Gag polyprotein; n=1; Simian immunodefi... 44 0.001
UniRef50_Q5L9T7 Cluster: Cold shock-like protein; n=2; Bacteroid... 44 0.001
UniRef50_Q9ZAH1 Cluster: Cold shock protein C; n=10; Streptococc... 44 0.001
UniRef50_Q1QLF4 Cluster: Cold-shock DNA-binding domain protein; ... 44 0.001
UniRef50_Q1FKR2 Cluster: Cold-shock protein, DNA-binding; n=2; C... 44 0.001
UniRef50_UPI0000E45D4B Cluster: PREDICTED: similar to alpha tect... 44 0.001
UniRef50_Q1GT29 Cluster: Cold-shock DNA-binding domain protein; ... 44 0.001
UniRef50_A3S070 Cluster: Cold shock protein; n=1; Ralstonia sola... 44 0.001
UniRef50_A5C6R1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.001
UniRef50_Q4Q8I6 Cluster: RNA binding protein rbp16, putative; n=... 44 0.001
UniRef50_UPI00006A28C0 Cluster: Y-box-binding protein 2 (Germ ce... 44 0.002
UniRef50_Q52KT6 Cluster: MGC115344 protein; n=2; Xenopus|Rep: MG... 44 0.002
UniRef50_A3UBK6 Cluster: Cold-shock DNA-binding domain protein; ... 44 0.002
UniRef50_A1ZFN2 Cluster: Conserved domain protein; n=2; Flexibac... 44 0.002
UniRef50_A5C9H3 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 44 0.002
UniRef50_Q9Y534 Cluster: Cold shock domain-containing protein C2... 44 0.002
UniRef50_Q9Y2V2 Cluster: Calcium-regulated heat stable protein 1... 44 0.002
UniRef50_Q9RBP7 Cluster: Cold shock protein 7.4; n=2; Rhodococcu... 43 0.003
UniRef50_A2UVR3 Cluster: Cold-shock DNA-binding domain protein; ... 43 0.003
UniRef50_P36627 Cluster: Cellular nucleic acid-binding protein h... 43 0.003
UniRef50_Q51929 Cluster: Major cold shock protein; n=74; Bacteri... 43 0.003
UniRef50_UPI0000DC181B Cluster: UPI0000DC181B related cluster; n... 42 0.005
UniRef50_Q82WG3 Cluster: Cold-shock DNA-binding domain; n=5; Bac... 42 0.005
UniRef50_A7BYF1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.005
UniRef50_Q012M7 Cluster: E3 ubiquitin ligase interacting with ar... 42 0.005
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 42 0.005
UniRef50_A2QPQ6 Cluster: Function: byr3 of S. pombe acts in the ... 42 0.005
UniRef50_Q4FUZ6 Cluster: Possible guanine-specific ribonuclease ... 42 0.006
UniRef50_Q1B3F5 Cluster: Cold-shock DNA-binding domain protein; ... 42 0.006
UniRef50_A1U4X1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.006
UniRef50_A4VQF2 Cluster: Cold-shock DNA-binding domain protein; ... 42 0.008
UniRef50_Q75GM6 Cluster: Putative non-LTR retroelement reverse t... 42 0.008
UniRef50_A5B7U3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.008
UniRef50_A2Y5S6 Cluster: Putative uncharacterized protein; n=1; ... 42 0.008
UniRef50_A2I3Y2 Cluster: Zinc finger protein-like protein; n=1; ... 42 0.008
UniRef50_Q8PK43 Cluster: Integral membrane protein; n=5; Proteob... 41 0.010
UniRef50_Q3Y013 Cluster: Cold-shock protein, DNA-binding; n=6; c... 41 0.010
UniRef50_P53849 Cluster: Zinc finger protein GIS2; n=7; Saccharo... 41 0.010
UniRef50_UPI000023F0FC Cluster: hypothetical protein FG10143.1; ... 41 0.014
UniRef50_A3XVA6 Cluster: Putative uncharacterized protein; n=1; ... 41 0.014
UniRef50_A2SHE7 Cluster: Cold-shock DNA-binding domain; n=1; Met... 41 0.014
UniRef50_A0D610 Cluster: Chromosome undetermined scaffold_39, wh... 41 0.014
UniRef50_A0CW28 Cluster: Chromosome undetermined scaffold_3, who... 41 0.014
UniRef50_Q6C9D6 Cluster: Yarrowia lipolytica chromosome D of str... 41 0.014
UniRef50_A5DEQ6 Cluster: Putative uncharacterized protein; n=1; ... 41 0.014
UniRef50_Q127M7 Cluster: Cold-shock DNA-binding domain protein; ... 40 0.018
UniRef50_Q03QI4 Cluster: Cold shock protein; n=4; Lactobacillus|... 40 0.018
UniRef50_Q75IR8 Cluster: Putative uncharacterized protein OSJNBb... 40 0.018
UniRef50_Q5KGW6 Cluster: DNA-binding protein hexbp, putative; n=... 40 0.018
UniRef50_A1D3L6 Cluster: Zinc knuckle domain protein; n=7; Peziz... 40 0.018
UniRef50_Q8AII1 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol) [Con... 40 0.018
UniRef50_Q0RYK4 Cluster: Probable cold shock protein CspA; n=1; ... 40 0.024
UniRef50_Q9VVA0 Cluster: CG9705-PA, isoform A; n=4; Diptera|Rep:... 40 0.024
UniRef50_UPI0000D57810 Cluster: PREDICTED: similar to CG9705-PA,... 40 0.032
UniRef50_A1GFH1 Cluster: Cold-shock DNA-binding domain protein; ... 40 0.032
UniRef50_Q8I248 Cluster: Cold-shock protein, putative; n=3; Plas... 40 0.032
UniRef50_Q7JQ89 Cluster: CnjB protein; n=3; Tetrahymena thermoph... 40 0.032
UniRef50_Q383X8 Cluster: Nucleic acid binding protein, putative;... 40 0.032
UniRef50_Q16VC4 Cluster: Putative uncharacterized protein; n=1; ... 40 0.032
UniRef50_Q2UBG0 Cluster: E3 ubiquitin ligase interacting with ar... 40 0.032
UniRef50_P22381 Cluster: Gag polyprotein [Contains: Core protein... 40 0.032
UniRef50_P62633 Cluster: Cellular nucleic acid-binding protein; ... 40 0.032
UniRef50_O33052 Cluster: Small cold-shock protein; n=7; Coryneba... 39 0.042
UniRef50_Q9ZV83 Cluster: Putative gag-protease polyprotein; n=1;... 39 0.042
UniRef50_Q7XEL6 Cluster: Zinc knuckle family protein; n=3; Oryza... 39 0.042
UniRef50_Q4DP50 Cluster: Putative uncharacterized protein; n=2; ... 39 0.042
UniRef50_UPI0000F1FB24 Cluster: PREDICTED: similar to novel tran... 39 0.055
UniRef50_UPI0000E4A204 Cluster: PREDICTED: similar to zinc finge... 39 0.055
UniRef50_UPI0000E49DCE Cluster: PREDICTED: hypothetical protein;... 39 0.055
UniRef50_UPI0000DC0B82 Cluster: UPI0000DC0B82 related cluster; n... 39 0.055
UniRef50_Q607Y7 Cluster: Cold-shock DNA-binding domain protein; ... 39 0.055
UniRef50_Q5Z0N3 Cluster: Putative cold shock protein; n=1; Nocar... 39 0.055
UniRef50_Q475L4 Cluster: Cold-shock protein, DNA-binding; n=1; R... 39 0.055
UniRef50_Q024L3 Cluster: Cold-shock DNA-binding domain protein; ... 39 0.055
UniRef50_A6W4V4 Cluster: Putative cold-shock DNA-binding domain ... 39 0.055
UniRef50_Q6CGQ4 Cluster: Similar to sp|P40507 Saccharomyces cere... 39 0.055
UniRef50_A6SBR5 Cluster: Putative uncharacterized protein; n=2; ... 39 0.055
UniRef50_Q9HP26 Cluster: Cold shock protein; n=11; Halobacteriac... 39 0.055
UniRef50_P18041 Cluster: Gag polyprotein (Pr55Gag) [Contains: Ma... 39 0.055
UniRef50_UPI00015B44FC Cluster: PREDICTED: hypothetical protein,... 38 0.073
UniRef50_Q54BY8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.073
UniRef50_A5DSM8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.073
UniRef50_Q9IDV9 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol) [Con... 38 0.073
UniRef50_UPI00015B4A7A Cluster: PREDICTED: similar to blastopia ... 38 0.097
UniRef50_A4KQU6 Cluster: Cold shock protein; n=7; Francisella tu... 38 0.097
UniRef50_A3X259 Cluster: Cold shock protein; n=1; Nitrobacter sp... 38 0.097
UniRef50_Q17HD4 Cluster: Putative uncharacterized protein; n=3; ... 38 0.097
UniRef50_P03347 Cluster: Gag polyprotein (Pr55Gag) [Contains: Ma... 38 0.097
UniRef50_UPI0000E46473 Cluster: PREDICTED: similar to Os07g04442... 38 0.13
UniRef50_A4EHC3 Cluster: Cold shock protein; n=1; Roseobacter sp... 38 0.13
UniRef50_A1SNP5 Cluster: Cold-shock protein, DNA-binding; n=26; ... 38 0.13
UniRef50_Q7XQ63 Cluster: OSJNBa0072K14.13 protein; n=3; Oryza sa... 38 0.13
UniRef50_Q2GYH5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.13
UniRef50_A7E6P2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.13
UniRef50_A6S6N4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.13
UniRef50_Q8WW36 Cluster: Zinc finger CCHC domain-containing prot... 38 0.13
UniRef50_Q04832 Cluster: DNA-binding protein HEXBP; n=8; Eukaryo... 38 0.13
UniRef50_UPI00015B4748 Cluster: PREDICTED: similar to polyprotei... 37 0.17
UniRef50_UPI00006CB6F6 Cluster: ''''Cold-shock'''' DNA-binding d... 37 0.17
UniRef50_Q7NNC3 Cluster: Gsr0488 protein; n=1; Gloeobacter viola... 37 0.17
UniRef50_Q019N2 Cluster: Chromosome 05 contig 1, DNA sequence; n... 37 0.17
UniRef50_A7QAJ6 Cluster: Chromosome undetermined scaffold_71, wh... 37 0.17
UniRef50_Q7QEY0 Cluster: ENSANGP00000012809; n=1; Anopheles gamb... 37 0.17
UniRef50_Q4Q1R1 Cluster: Poly-zinc finger protein 2, putative; n... 37 0.17
UniRef50_Q4Q1A0 Cluster: Putative uncharacterized protein; n=3; ... 37 0.17
UniRef50_Q871K8 Cluster: Putative uncharacterized protein 20H10.... 37 0.17
UniRef50_Q5APC1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.17
UniRef50_A7EY54 Cluster: Putative uncharacterized protein; n=1; ... 37 0.17
UniRef50_UPI00006CB81E Cluster: conserved hypothetical protein; ... 37 0.22
UniRef50_A3R3J7 Cluster: Gag polyprotein; n=112; Feline immunode... 37 0.22
UniRef50_Q0C0S6 Cluster: Cold shock DNA-binding protein; n=1; Hy... 37 0.22
UniRef50_A4SJX6 Cluster: Cold-shock protein, DNA-binding; n=2; A... 37 0.22
UniRef50_A3WZM6 Cluster: Cold shock DNA binding protein; n=1; Ni... 37 0.22
UniRef50_Q9LQZ9 Cluster: F10A5.22; n=9; Magnoliophyta|Rep: F10A5... 37 0.22
UniRef50_Q24262 Cluster: Blastopia polyprotein; n=2; Drosophila ... 37 0.22
UniRef50_A0CIJ2 Cluster: Chromosome undetermined scaffold_19, wh... 37 0.22
UniRef50_Q4PEU5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.22
UniRef50_Q2H7W0 Cluster: Putative uncharacterized protein; n=2; ... 37 0.22
UniRef50_Q0U234 Cluster: Putative uncharacterized protein; n=1; ... 37 0.22
UniRef50_Q0KYJ4 Cluster: Cold-shock DNA-binding domain protein; ... 36 0.30
UniRef50_A3X5Q6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.30
UniRef50_Q10BE5 Cluster: Zinc knuckle family protein, expressed;... 36 0.30
UniRef50_A5C4E0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.30
UniRef50_A5BJM5 Cluster: Putative uncharacterized protein; n=8; ... 36 0.30
UniRef50_A5B194 Cluster: Putative uncharacterized protein; n=2; ... 36 0.30
UniRef50_A5ADY5 Cluster: Putative uncharacterized protein; n=6; ... 36 0.30
UniRef50_Q868R5 Cluster: Gag-like protein; n=1; Anopheles gambia... 36 0.30
UniRef50_Q1RPW4 Cluster: Zinc finger protein; n=1; Ciona intesti... 36 0.30
UniRef50_O76743 Cluster: ATP-dependent RNA helicase glh-4; n=2; ... 36 0.30
UniRef50_P03352 Cluster: Gag polyprotein [Contains: Core protein... 36 0.30
UniRef50_UPI00015B4A37 Cluster: PREDICTED: hypothetical protein;... 36 0.39
UniRef50_UPI000150A0B6 Cluster: hypothetical protein TTHERM_0034... 36 0.39
UniRef50_UPI00006CB66C Cluster: hypothetical protein TTHERM_0044... 36 0.39
UniRef50_Q9FYA7 Cluster: Splicing factor RSZ33; n=9; core eudico... 36 0.39
UniRef50_Q2HW87 Cluster: RNA-directed DNA polymerase (Reverse tr... 36 0.39
UniRef50_A5BQV9 Cluster: Putative uncharacterized protein; n=3; ... 36 0.39
UniRef50_Q7PP02 Cluster: ENSANGP00000017688; n=1; Anopheles gamb... 36 0.39
UniRef50_A0EC05 Cluster: Chromosome undetermined scaffold_89, wh... 36 0.39
UniRef50_A0DVR0 Cluster: Chromosome undetermined scaffold_66, wh... 36 0.39
UniRef50_A0DS00 Cluster: Chromosome undetermined scaffold_61, wh... 36 0.39
UniRef50_Q5BBY6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.39
UniRef50_Q2MF47 Cluster: Putative cold shock protein; n=1; Strep... 36 0.52
UniRef50_Q03EZ0 Cluster: Cold shock protein; n=1; Pediococcus pe... 36 0.52
UniRef50_Q2QTW8 Cluster: Zinc knuckle family protein; n=2; Oryza... 36 0.52
UniRef50_Q2QKC1 Cluster: Alternative splicing regulator; n=12; M... 36 0.52
UniRef50_A7PG94 Cluster: Chromosome chr6 scaffold_15, whole geno... 36 0.52
UniRef50_A5B6R4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.52
UniRef50_A3B0T0 Cluster: Putative uncharacterized protein; n=4; ... 36 0.52
UniRef50_Q868R9 Cluster: Gag-like protein; n=1; Anopheles gambia... 36 0.52
UniRef50_Q6BWE8 Cluster: Debaryomyces hansenii chromosome B of s... 36 0.52
UniRef50_Q0URW4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.52
UniRef50_A1D997 Cluster: Zinc knuckle domain protein; n=16; Asco... 36 0.52
UniRef50_P18096 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol) [Con... 36 0.52
UniRef50_Q72AY2 Cluster: Cold shock domain protein; n=3; Desulfo... 35 0.68
UniRef50_Q2RY07 Cluster: Cold-shock DNA-binding domain protein; ... 35 0.68
UniRef50_Q1K0A5 Cluster: Cold-shock DNA-binding domain protein; ... 35 0.68
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 35 0.68
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 35 0.68
UniRef50_Q4GYD7 Cluster: Putative uncharacterized protein; n=1; ... 35 0.68
UniRef50_Q22WR4 Cluster: Zinc knuckle family protein; n=1; Tetra... 35 0.68
UniRef50_A7RSD8 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 35 0.68
UniRef50_Q699V2 Cluster: Gag polyprotein; n=8; Simian immunodefi... 35 0.90
UniRef50_Q8EIU8 Cluster: Cold shock domain family protein; n=7; ... 35 0.90
UniRef50_Q5PBP1 Cluster: Cold shock protein; n=7; Anaplasmatacea... 35 0.90
UniRef50_Q7WXG5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.90
UniRef50_A0YEF6 Cluster: Putative uncharacterized protein; n=1; ... 35 0.90
UniRef50_Q949L3 Cluster: Putative polyprotein; n=2; Cicer arieti... 35 0.90
UniRef50_Q33BK8 Cluster: Retrotransposon protein, putative, Ty1-... 35 0.90
UniRef50_A7P7X8 Cluster: Chromosome chr3 scaffold_8, whole genom... 35 0.90
UniRef50_A3C4H5 Cluster: Putative uncharacterized protein; n=2; ... 35 0.90
UniRef50_A2Y2D8 Cluster: Putative uncharacterized protein; n=2; ... 35 0.90
UniRef50_Q8T8R1 Cluster: GM14667p; n=8; Neoptera|Rep: GM14667p -... 35 0.90
UniRef50_Q9P795 Cluster: TRAMP complex subunit; n=1; Schizosacch... 35 0.90
UniRef50_A6RFJ6 Cluster: Predicted protein; n=6; Ajellomyces cap... 35 0.90
UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces ca... 35 0.90
UniRef50_UPI00015B43D2 Cluster: PREDICTED: similar to gag-like p... 34 1.2
UniRef50_UPI00015B43CA Cluster: PREDICTED: similar to protease, ... 34 1.2
UniRef50_UPI000150ABAE Cluster: Zinc knuckle family protein; n=1... 34 1.2
UniRef50_UPI00006CAF3D Cluster: cation channel family protein; n... 34 1.2
UniRef50_UPI0000660375 Cluster: Zinc finger CCHC domain-containi... 34 1.2
UniRef50_Q15SJ6 Cluster: Cold-shock DNA-binding domain protein; ... 34 1.2
UniRef50_A3Z4K4 Cluster: Phytanoyl-CoA dioxygenase, PhyH family ... 34 1.2
UniRef50_A1TSW1 Cluster: Cold-shock DNA-binding domain protein; ... 34 1.2
UniRef50_A5BJF9 Cluster: Putative uncharacterized protein; n=7; ... 34 1.2
UniRef50_Q55AJ7 Cluster: Putative uncharacterized protein; n=2; ... 34 1.2
UniRef50_Q16NV0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_A6S6C7 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_UPI0000E480B9 Cluster: PREDICTED: hypothetical protein;... 34 1.6
UniRef50_UPI00006A2972 Cluster: UPI00006A2972 related cluster; n... 34 1.6
UniRef50_A5KIG0 Cluster: Putative uncharacterized protein; n=2; ... 34 1.6
UniRef50_A5BE74 Cluster: Putative uncharacterized protein; n=1; ... 34 1.6
UniRef50_Q22BP0 Cluster: Zinc knuckle family protein; n=1; Tetra... 34 1.6
UniRef50_Q0UA92 Cluster: Putative uncharacterized protein; n=1; ... 34 1.6
UniRef50_Q8N3Z6 Cluster: Zinc finger CCHC domain-containing prot... 34 1.6
UniRef50_P69730 Cluster: Gag polyprotein [Contains: Matrix prote... 34 1.6
UniRef50_UPI00015B4C8F Cluster: PREDICTED: similar to zinc finge... 33 2.1
UniRef50_UPI00015B472C Cluster: PREDICTED: similar to copia-like... 33 2.1
UniRef50_Q8D4D0 Cluster: Predicted membrane protein; n=3; Vibrio... 33 2.1
UniRef50_Q84IJ3 Cluster: Cold shock protein; n=1; Janthinobacter... 33 2.1
UniRef50_Q4AG52 Cluster: Cold-shock protein, DNA-binding; n=3; B... 33 2.1
UniRef50_Q015J3 Cluster: Zinc finger, CCHC domain containing 9; ... 33 2.1
UniRef50_Q56UF0 Cluster: Putative zinc finger protein; n=1; Lymn... 33 2.1
UniRef50_Q248G5 Cluster: Putative uncharacterized protein; n=1; ... 33 2.1
UniRef50_P90606 Cluster: Nucleic acid binding protein; n=7; Tryp... 33 2.1
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 33 2.1
UniRef50_A1D100 Cluster: FAD binding domain protein; n=4; Tricho... 33 2.1
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 33 2.1
UniRef50_P81622 Cluster: Cold shock protein CspSt; n=6; Streptoc... 33 2.1
UniRef50_UPI00015B4B9B Cluster: PREDICTED: hypothetical protein,... 33 2.8
UniRef50_UPI00015B4406 Cluster: PREDICTED: similar to putative r... 33 2.8
UniRef50_UPI0000DB71F1 Cluster: PREDICTED: similar to CG9715-PA;... 33 2.8
UniRef50_UPI00006CA3F4 Cluster: cyclic nucleotide-binding domain... 33 2.8
UniRef50_Q48AJ7 Cluster: Cold-shock DNA-binding domain family pr... 33 2.8
UniRef50_Q93NE9 Cluster: CspA; n=2; Neisseria gonorrhoeae|Rep: C... 33 2.8
UniRef50_Q1ZDW9 Cluster: Cold-shock DNA-binding domain protein; ... 33 2.8
UniRef50_A6FGU4 Cluster: Cold shock domain family protein; n=1; ... 33 2.8
UniRef50_A0NS44 Cluster: Cold-shock DNA-binding domain protein; ... 33 2.8
UniRef50_A5BSK9 Cluster: Putative uncharacterized protein; n=1; ... 33 2.8
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 33 2.8
UniRef50_Q2UUL2 Cluster: Predicted protein; n=1; Aspergillus ory... 33 2.8
UniRef50_UPI00015B4869 Cluster: PREDICTED: similar to polyprotei... 33 3.6
UniRef50_UPI00015ADF4D Cluster: hypothetical protein NEMVEDRAFT_... 33 3.6
UniRef50_UPI0000499BE4 Cluster: zinc finger protein; n=1; Entamo... 33 3.6
UniRef50_Q8A6J7 Cluster: Cold shock protein, putative DNA-bindin... 33 3.6
UniRef50_Q88Q61 Cluster: Cold shock DNA-binding domain protein; ... 33 3.6
UniRef50_Q0RHY5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q9ZQJ3 Cluster: Putative uncharacterized protein At2g13... 33 3.6
UniRef50_Q9SXB2 Cluster: T28P6.8 protein; n=11; Arabidopsis thal... 33 3.6
UniRef50_Q9FYD1 Cluster: Putative uncharacterized protein F22J12... 33 3.6
UniRef50_Q0JF27 Cluster: Os04g0170500 protein; n=2; Oryza sativa... 33 3.6
UniRef50_A7QRX1 Cluster: Chromosome undetermined scaffold_153, w... 33 3.6
UniRef50_A5B7N0 Cluster: Putative uncharacterized protein; n=21;... 33 3.6
UniRef50_A5AVA0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q9VVA9 Cluster: CG9715-PA; n=4; melanogaster subgroup|R... 33 3.6
UniRef50_Q95X00 Cluster: Poly-zinc finger protein 2; n=4; Trypan... 33 3.6
UniRef50_Q86EQ4 Cluster: Clone ZZD1536 mRNA sequence; n=1; Schis... 33 3.6
UniRef50_Q4N8A2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q4DSM4 Cluster: Putative uncharacterized protein; n=2; ... 33 3.6
UniRef50_A7L494 Cluster: Putative zinc finger protein; n=1; Arte... 33 3.6
UniRef50_A0DH71 Cluster: Chromosome undetermined scaffold_50, wh... 33 3.6
UniRef50_Q5KI76 Cluster: Putative uncharacterized protein; n=2; ... 33 3.6
UniRef50_Q4A1V9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_P40507 Cluster: Protein AIR1; n=2; Saccharomyces cerevi... 33 3.6
UniRef50_UPI00006CFB28 Cluster: Zinc knuckle family protein; n=1... 32 4.8
UniRef50_Q5XGJ9 Cluster: LOC495203 protein; n=23; Xenopus|Rep: L... 32 4.8
UniRef50_Q28EP6 Cluster: Novel protein; n=3; Xenopus tropicalis|... 32 4.8
UniRef50_Q0C0X9 Cluster: Cold shock DNA-binding membrane protein... 32 4.8
UniRef50_Q94885 Cluster: Orf protein; n=1; Drosophila melanogast... 32 4.8
UniRef50_Q5DAJ0 Cluster: SJCHGC09481 protein; n=1; Schistosoma j... 32 4.8
UniRef50_A0D5E8 Cluster: Chromosome undetermined scaffold_38, wh... 32 4.8
UniRef50_A0BG52 Cluster: Chromosome undetermined scaffold_105, w... 32 4.8
UniRef50_UPI0000D55A74 Cluster: PREDICTED: similar to CG2987-PA,... 32 6.4
UniRef50_Q76IL0 Cluster: Gag-like protein; n=14; Danio rerio|Rep... 32 6.4
UniRef50_A6M991 Cluster: Putative uncharacterized protein; n=1; ... 32 6.4
UniRef50_Q74JX5 Cluster: Cold shock protein; n=5; Lactobacillus|... 32 6.4
UniRef50_Q12K82 Cluster: Putative uncharacterized protein; n=1; ... 32 6.4
UniRef50_A7BTG1 Cluster: Cold-shock protein, DNA-binding; n=1; B... 32 6.4
UniRef50_A5NZE6 Cluster: ATPase involved in DNA repair-like prot... 32 6.4
UniRef50_Q9XEA4 Cluster: Putative transposon protein; n=1; Arabi... 32 6.4
UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP... 32 6.4
UniRef50_Q10PB8 Cluster: Retrotransposon protein, putative, Ty1-... 32 6.4
UniRef50_A3C0J3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.4
UniRef50_Q868T1 Cluster: Gag-like protein; n=2; gambiae species ... 32 6.4
UniRef50_Q5TSJ8 Cluster: ENSANGP00000029385; n=1; Anopheles gamb... 32 6.4
UniRef50_Q5BI97 Cluster: RE04396p; n=1; Drosophila melanogaster|... 32 6.4
UniRef50_Q4QGH1 Cluster: Putative uncharacterized protein; n=3; ... 32 6.4
UniRef50_A7T5K2 Cluster: Predicted protein; n=1; Nematostella ve... 32 6.4
UniRef50_Q75CF9 Cluster: ACL040Cp; n=2; Saccharomycetaceae|Rep: ... 32 6.4
UniRef50_Q6CHX6 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 32 6.4
UniRef50_Q4P1W4 Cluster: Putative uncharacterized protein; n=1; ... 32 6.4
UniRef50_Q12476 Cluster: Protein AIR2; n=2; Saccharomyces cerevi... 32 6.4
UniRef50_UPI00015B4390 Cluster: PREDICTED: similar to putative r... 31 8.4
UniRef50_UPI00000043F9 Cluster: PREDICTED: hypothetical protein ... 31 8.4
UniRef50_Q76IM2 Cluster: Gag-like protein; n=7; Danio rerio|Rep:... 31 8.4
UniRef50_Q76B35 Cluster: Gag-like protein; n=2; Takifugu rubripe... 31 8.4
UniRef50_A6WDS7 Cluster: 3-hydroxyacyl-CoA dehydrogenase NAD-bin... 31 8.4
UniRef50_A4V785 Cluster: Putative cold shock domain transmembran... 31 8.4
UniRef50_A4A8L5 Cluster: Primosomal protein N`; n=1; Congregibac... 31 8.4
UniRef50_A0UNB6 Cluster: Cold-shock DNA-binding domain protein; ... 31 8.4
UniRef50_Q6L424 Cluster: Zinc knuckle family protein; n=1; Solan... 31 8.4
UniRef50_Q2HU05 Cluster: Integrase, catalytic region; Zinc finge... 31 8.4
UniRef50_A5BPP5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.4
UniRef50_A3C9F6 Cluster: Putative uncharacterized protein; n=5; ... 31 8.4
UniRef50_Q868R7 Cluster: Gag-like protein; n=1; Anopheles gambia... 31 8.4
UniRef50_Q868R3 Cluster: Gag-like protein; n=1; Anopheles gambia... 31 8.4
UniRef50_Q5CIJ5 Cluster: Cp22.4.1 protein; n=3; Cryptosporidium|... 31 8.4
UniRef50_Q381M8 Cluster: Putative uncharacterized protein; n=1; ... 31 8.4
UniRef50_Q23JK0 Cluster: Cation channel family protein; n=1; Tet... 31 8.4
UniRef50_Q16NU8 Cluster: Putative uncharacterized protein; n=2; ... 31 8.4
UniRef50_A0BFX7 Cluster: Chromosome undetermined scaffold_105, w... 31 8.4
UniRef50_Q6FPJ2 Cluster: Candida glabrata strain CBS138 chromoso... 31 8.4
UniRef50_Q6FNS4 Cluster: Candida glabrata strain CBS138 chromoso... 31 8.4
UniRef50_Q5KPL9 Cluster: MRNA-nucleus export-related protein, pu... 31 8.4
UniRef50_A7TKB4 Cluster: Putative uncharacterized protein; n=1; ... 31 8.4
UniRef50_A2Q9T1 Cluster: Contig An01c0300, complete genome; n=6;... 31 8.4
>UniRef50_Q2LZN5 Cluster: GA14466-PA; n=3; Endopterygota|Rep:
GA14466-PA - Drosophila pseudoobscura (Fruit fly)
Length = 168
Score = 213 bits (521), Expect = 1e-54
Identities = 90/129 (69%), Positives = 108/129 (83%), Gaps = 1/129 (0%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG 59
G R G+CKWFNVAKGWGF+TP+DGGQ+VFVHQSV++M GFRSLG+ EEVEFEC + +G
Sbjct: 18 GCVRLGKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIKMSGFRSLGEQEEVEFECHRTARG 77
Query: 60 LEATRVTGPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKS 119
LEATRV+G G +CHGS RP R R++RCYNCGEFANHIA++C++GPQPKRCH C+
Sbjct: 78 LEATRVSGRAGDECHGSTYRPRINRRTRRMRCYNCGEFANHIASECALGPQPKRCHRCRG 137
Query: 120 EDHLVADCP 128
EDHL ADCP
Sbjct: 138 EDHLHADCP 146
>UniRef50_Q9VRN5 Cluster: Lin-28 homolog; n=1; Drosophila
melanogaster|Rep: Lin-28 homolog - Drosophila
melanogaster (Fruit fly)
Length = 195
Score = 212 bits (517), Expect = 3e-54
Identities = 90/131 (68%), Positives = 108/131 (82%), Gaps = 1/131 (0%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG 59
G R G+CKWFNVAKGWGF+TP+DGGQ+VFVHQSV+QM GFRSLG+ EEVEFEC+ + +G
Sbjct: 36 GCVRLGKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRG 95
Query: 60 LEATRVTGPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKS 119
LEATRV+ +G C GS RP R R++RCYNCGEFANHIA++C++GPQPKRCH C+
Sbjct: 96 LEATRVSSRHGGSCQGSTYRPRINRRTRRMRCYNCGEFANHIASECALGPQPKRCHRCRG 155
Query: 120 EDHLVADCPIK 130
EDHL ADCP K
Sbjct: 156 EDHLHADCPHK 166
>UniRef50_UPI0000589074 Cluster: PREDICTED: similar to
ENSANGP00000011455; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000011455
- Strongylocentrotus purpuratus
Length = 234
Score = 153 bits (370), Expect = 2e-36
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLG-DEEVEFECKESDKGLEAT 63
RG+CKWF++AK +GF+TPDDG DVFVHQ V++M G+RSL +EEVE++ + S+KG EAT
Sbjct: 64 RGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREAT 123
Query: 64 RVTGPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHL 123
VTG +G DC GS RR K R RC+NCG +H A C P PKRC+ C +EDHL
Sbjct: 124 TVTGVDGGDCKGSKRRLRPKYRRTANRCFNCGNSGHH-AKDCPEPPLPKRCYACHAEDHL 182
Query: 124 VADCPIKVEK 133
ADCP K +
Sbjct: 183 WADCPNKTSQ 192
>UniRef50_Q1RLA8 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 193
Score = 142 bits (344), Expect = 3e-33
Identities = 70/136 (51%), Positives = 87/136 (63%), Gaps = 5/136 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQ---DVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
G CKWFN +G+GFITPD Q DVFVHQS + M GFRSL + + V+F K S KGLE
Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88
Query: 62 ATRVTGPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSED 121
A +V GP G G++R S+ R+ RCYNC E +H A +C + P PK+C NCKS D
Sbjct: 89 AVKVVGPGGEKLVGAERTKKSRPSDRRSRCYNCDEEGHH-AKQCLLPPWPKKCFNCKSFD 147
Query: 122 HLVADCPIKVEKKKDE 137
HL+ADCP K + E
Sbjct: 148 HLIADCPNKHDTSSTE 163
>UniRef50_Q6ZN17 Cluster: Lin-28 homolog B; n=40; Coelomata|Rep:
Lin-28 homolog B - Homo sapiens (Human)
Length = 250
Score = 140 bits (338), Expect = 2e-32
Identities = 75/137 (54%), Positives = 91/137 (66%), Gaps = 13/137 (9%)
Query: 6 GRCKWFNVAKGWGFIT-------PDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESD 57
G CKWFNV G+GFI+ P D DVFVHQS L M GFRSL + E VEF K+S
Sbjct: 32 GHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSS 91
Query: 58 KGLEATRVTGPNGTDCHGSDRRP----LSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKR 113
KGLE+ RVTGP G+ C GS+RRP L K + + RCYNCG +H A +CS+ PQPK+
Sbjct: 92 KGLESIRVTGPGGSPCLGSERRPKGKTLQKRKPKGDRCYNCGGLDHH-AKECSLPPQPKK 150
Query: 114 CHNCKSEDHLVADCPIK 130
CH C+S H+VA+CP K
Sbjct: 151 CHYCQSIMHMVANCPHK 167
>UniRef50_A3EXS4 Cluster: RNA-binding protein LIN-28-like protein;
n=1; Maconellicoccus hirsutus|Rep: RNA-binding protein
LIN-28-like protein - Maconellicoccus hirsutus (hibiscus
mealybug)
Length = 124
Score = 138 bits (333), Expect = 7e-32
Identities = 59/86 (68%), Positives = 69/86 (80%), Gaps = 1/86 (1%)
Query: 48 EVEFECKESDKGLEATRVTGPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSI 107
EVEFEC+E+ KG EAT VTGPNG C GS +R + K R RKIRCYNCGE+ NH+AAKC +
Sbjct: 1 EVEFECEETPKGYEATIVTGPNGNFCIGS-QRAMGKRRPRKIRCYNCGEYGNHVAAKCKL 59
Query: 108 GPQPKRCHNCKSEDHLVADCPIKVEK 133
GP PKRCH+CKSEDHL+ADCP + K
Sbjct: 60 GPMPKRCHHCKSEDHLIADCPHRFNK 85
>UniRef50_P92186 Cluster: Protein lin-28; n=5; Caenorhabditis|Rep:
Protein lin-28 - Caenorhabditis elegans
Length = 227
Score = 114 bits (275), Expect = 7e-25
Identities = 59/137 (43%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKE--SDKGLEA 62
G CKWFNV+KG+GF+ D G+D+FVHQS L M GFRSL + E V + +E + KG EA
Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNGKGREA 114
Query: 63 TRVTGP-NGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKC-SIGPQPKRCHNCKSE 120
V+G G GS PL + + +RC+ CG+FA H A C ++ K C+ C SE
Sbjct: 115 YAVSGEVEGQGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSE 174
Query: 121 DHLVADCPIKVEKKKDE 137
+H+ + CP + K + E
Sbjct: 175 EHVSSICPERRRKHRPE 191
>UniRef50_Q4S6T5 Cluster: Chromosome 14 SCAF14723, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 14
SCAF14723, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 206
Score = 109 bits (261), Expect = 3e-23
Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 7/103 (6%)
Query: 34 SVLQMPGFRSLGD-EEVEFECKESDKGLEATRVTGPNGTDCHGSDRRPLSKIRFRK---- 88
S L M GFRSL + E+VEF K+S KGLE+ RVTGP G C GS+RRP KI +K
Sbjct: 103 SKLVMEGFRSLKEGEQVEFTFKKSTKGLESLRVTGPGGGPCAGSERRPKGKIPLQKRKPK 162
Query: 89 -IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIK 130
RCYNCG +H A +C + PQPK+CH C+S H+VA CP K
Sbjct: 163 GDRCYNCGGLDHH-AKECGLPPQPKKCHYCQSITHMVAQCPHK 204
Score = 39.5 bits (88), Expect = 0.032
Identities = 21/37 (56%), Positives = 23/37 (62%), Gaps = 7/37 (18%)
Query: 6 GRCKWFNVAKGWGFI-------TPDDGGQDVFVHQSV 35
G CKWFNV G+GFI +P D DVFVHQSV
Sbjct: 9 GFCKWFNVRMGFGFISMTHSEGSPVDPPLDVFVHQSV 45
>UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 671
Score = 109 bits (261), Expect = 3e-23
Identities = 56/131 (42%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN+ KG+GFIT DDGG+DVFVHQS ++ G+RSL + E V+ SDKG A
Sbjct: 485 GSVKWFNLIKGFGFITRDDGGEDVFVHQSAIKASGYRSLEEGEHVQLTISNSDKGKVAIC 544
Query: 65 VTGPNGTDCHGSDRRPLSKIRFRKIR--CYNCGEFANHIAAKCSIGPQPKR-CHNCKSED 121
VT P G + G+ R+ K RK C+NC + H C + R CH C S +
Sbjct: 545 VTSPGGGNVKGASRKNRVKKGARKYTSLCFNCNN-SGHRVRNCPYERRTNRICHKCGSIE 603
Query: 122 HLVADCPIKVE 132
H++ CP+ +E
Sbjct: 604 HMIRKCPLILE 614
>UniRef50_Q5CVY2 Cluster: Cold shock RNA binding domain of the OB
fold; n=2; Cryptosporidium|Rep: Cold shock RNA binding
domain of the OB fold - Cryptosporidium parvum Iowa II
Length = 135
Score = 93.1 bits (221), Expect = 2e-18
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLG-DEEVEFECKESDKG-LEAT 63
G CKWF+ KG+GFITPDDG +D+FVHQ +++ GFRSL DE VE+E + DKG +A
Sbjct: 13 GVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRKAV 72
Query: 64 RVTGPNGTDCHGSDRRPLSKIRFRKIR 90
V+GPNG G RR + R R +R
Sbjct: 73 NVSGPNGAPVKGDRRRGRGRGRGRGMR 99
>UniRef50_A1L2L1 Cluster: LOC100036881 protein; n=1; Xenopus
laevis|Rep: LOC100036881 protein - Xenopus laevis
(African clawed frog)
Length = 131
Score = 88.6 bits (210), Expect = 5e-17
Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG-- 59
K G CKWFN KG+GF+TPDDG D+FVHQS + GFRSL + E VEF ++
Sbjct: 3 KLTGTCKWFNAEKGYGFLTPDDGSPDIFVHQSTIHADGFRSLAEGEPVEFSVITDERSGK 62
Query: 60 LEATRVTGPNGTDCHGSDRR 79
L+A VTGPNG G+ RR
Sbjct: 63 LKAADVTGPNGAAVRGAPRR 82
>UniRef50_Q75QN8 Cluster: Cold shock domain protein 3; n=2;
Triticum aestivum|Rep: Cold shock domain protein 3 -
Triticum aestivum (Wheat)
Length = 231
Score = 83.8 bits (198), Expect = 1e-15
Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEE-VEFECKESDKG 59
G + +G KWFNV KG+GFI+PDDGG+D+FVHQS ++ G+RSL + + VEFE D G
Sbjct: 2 GERVKGTVKWFNVTKGFGFISPDDGGEDLFVHQSAIKSDGYRSLNENDAVEFEIITGDDG 61
Query: 60 -LEATRVTGPNGTDCHGSDR 78
+A+ VT P G G R
Sbjct: 62 RTKASDVTAPGGGALSGGSR 81
>UniRef50_O65639 Cluster: Glycine-rich protein; n=8;
Magnoliophyta|Rep: Glycine-rich protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 299
Score = 83.4 bits (197), Expect = 2e-15
Identities = 52/136 (38%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLG-DEEVEFECKE-SDKGLEAT 63
G+ WFN +KG+GFITPDDG ++FVHQS + G+RSL + VEF + SD +A
Sbjct: 13 GKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKTKAV 72
Query: 64 RVTGPNGTDC--HGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSI------GPQPKR-- 113
VT P G + R ++ CYNCGE HI+ C I G + R
Sbjct: 73 NVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGEL-GHISKDCGIGGGGGGGERRSRGG 131
Query: 114 --CHNCKSEDHLVADC 127
C+NC H DC
Sbjct: 132 EGCYNCGDTGHFARDC 147
Score = 39.1 bits (87), Expect = 0.042
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKR-CHNCKSEDHLVADC 127
CY+CG HIA C+ QP R C+ C HL DC
Sbjct: 232 CYSCGG-VGHIARDCATKRQPSRGCYQCGGSGHLARDC 268
>UniRef50_A4RZ32 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 106
Score = 83.0 bits (196), Expect = 3e-15
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
+ RG+ KWFN KG+GFI P DG +++FVHQ+ + GFRS+ + EEVE++ ++D +
Sbjct: 4 RARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDFAPK 63
Query: 62 ATRVTGPNGTDCHGSDRR 79
A VTGP+G G+ RR
Sbjct: 64 AVNVTGPDGVAVKGAPRR 81
>UniRef50_Q38896 Cluster: Glycine-rich protein 2b; n=26; cellular
organisms|Rep: Glycine-rich protein 2b - Arabidopsis
thaliana (Mouse-ear cress)
Length = 201
Score = 82.2 bits (194), Expect = 5e-15
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEE-VEFECKESDKG 59
G +R+G KWF+ KG+GFITP DGG D+FVHQS ++ GFRSL EE VEF+ + + G
Sbjct: 12 GDRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSG 71
Query: 60 L-EATRVTGPNGTDCHGS 76
+A V+GP+G G+
Sbjct: 72 RPKAIEVSGPDGAPVQGN 89
>UniRef50_A3BPB0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 238
Score = 76.6 bits (180), Expect = 2e-13
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG-LEA 62
+G KWF+ KG+GFITPDDGG+D+FVHQS L+ G+RSL D + VEF + G +A
Sbjct: 7 KGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRTKA 66
Query: 63 TRVTGPNG 70
VT P G
Sbjct: 67 VNVTAPGG 74
>UniRef50_A4V6J7 Cluster: Y-Box factor protein; n=1; Dugesia
japonica|Rep: Y-Box factor protein - Dugesia japonica
(Planarian)
Length = 178
Score = 76.6 bits (180), Expect = 2e-13
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQ--MPG-FRSLG-DEEVEFECKESDKG 59
R G+ KW+NV KG+GFI DD +DVFVHQS + PG +SLG DE+V F+ + KG
Sbjct: 3 RGGKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKG 62
Query: 60 LEATRVTGPNGTDCHGSDRRPLSKIRFRKIR 90
EA VTGPNG GS P + + R R
Sbjct: 63 NEAMNVTGPNGDAVLGSKFAPNNDFQNRNNR 93
>UniRef50_P41824 Cluster: Y-box factor homolog; n=2; cellular
organisms|Rep: Y-box factor homolog - Aplysia
californica (California sea hare)
Length = 253
Score = 76.2 bits (179), Expect = 3e-13
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGD-EEVEFECKESDKGL 60
G KWFNV G+GFI DD +DVFVHQ+ + RS+GD E+VEF+ E +KG
Sbjct: 35 GTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGN 94
Query: 61 EATRVTGPNGTDCHGSDRRPLSKIRFRK 88
EA VTGP G++ GS + + RFR+
Sbjct: 95 EAANVTGPEGSNVQGS-KYAADRRRFRR 121
>UniRef50_Q9Y2T7 Cluster: Y-box-binding protein 2; n=21;
Tetrapoda|Rep: Y-box-binding protein 2 - Homo sapiens
(Human)
Length = 364
Score = 74.9 bits (176), Expect = 7e-13
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGD-EEVEFECKESDKGL 60
G KWFNV G+GFI +D +DVFVHQ+ ++ RS+GD E VEF+ E +KG
Sbjct: 96 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGA 155
Query: 61 EATRVTGPNGTDCHGSDRRP 80
EAT VTGP G GS P
Sbjct: 156 EATNVTGPGGVPVKGSRYAP 175
>UniRef50_Q90WH1 Cluster: Cold-shock domain protein; n=1; Oryzias
latipes|Rep: Cold-shock domain protein - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 366
Score = 74.5 bits (175), Expect = 9e-13
Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGD-EEVEFECKESDKG 59
+G KWFNV G+GFI +D +DVFVHQ+ ++ RS+GD E VEF+ E+ KG
Sbjct: 4 QGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKG 63
Query: 60 LEATRVTGPNGTDCHGSDRRPLSKIRFRK 88
EA VTGP G GS P +K RFR+
Sbjct: 64 SEAANVTGPGGIPVKGSRYAP-NKRRFRR 91
>UniRef50_O13015 Cluster: Y box protein 2; n=1; Carassius
auratus|Rep: Y box protein 2 - Carassius auratus
(Goldfish)
Length = 297
Score = 74.5 bits (175), Expect = 9e-13
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGD-EEVEFECKESDKGL 60
G KWFNV G+GFI +D +DVFVHQ+ ++ RS+GD E VEF+ E+ KG
Sbjct: 23 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAKGS 82
Query: 61 EATRVTGPNGTDCHGSDRRPLSKIRFRK 88
EA VTGP G GS P +K RFR+
Sbjct: 83 EAANVTGPGGIPVKGSRYAP-NKRRFRR 109
>UniRef50_P16989 Cluster: DNA-binding protein A; n=92; cellular
organisms|Rep: DNA-binding protein A - Homo sapiens
(Human)
Length = 372
Score = 74.5 bits (175), Expect = 9e-13
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGD-EEVEFECKESDKGL 60
G KWFNV G+GFI +D +DVFVHQ+ ++ RS+GD E VEF+ E +KG
Sbjct: 93 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 152
Query: 61 EATRVTGPNGTDCHGSDRRPLSKIRFRK 88
EA VTGP+G GS R + R+R+
Sbjct: 153 EAANVTGPDGVPVEGS-RYAADRRRYRR 179
>UniRef50_O62213 Cluster: Putative uncharacterized protein cey-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cey-1 - Caenorhabditis elegans
Length = 208
Score = 74.1 bits (174), Expect = 1e-12
Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVL--QMPG--FRSLGD-EEVEFECKESD 57
K +G KWFNV G+GFI D +D+FVHQ+ + P RSLGD EEV F+ E
Sbjct: 20 KVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGS 79
Query: 58 KGLEATRVTGPNGTDCHGS 76
KGLEA VTGP+G GS
Sbjct: 80 KGLEAASVTGPDGGPVQGS 98
>UniRef50_Q9ZFK9 Cluster: CspA; n=25; Bacteria|Rep: CspA -
Myxococcus xanthus
Length = 68
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN AKG+GFI DDGG DVF H + +Q GFR+L + ++VEFE ++ KGL+A
Sbjct: 4 GTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAEN 63
Query: 65 V 65
V
Sbjct: 64 V 64
>UniRef50_Q4UBG6 Cluster: Cold shock protein, putative; n=2;
Theileria|Rep: Cold shock protein, putative - Theileria
annulata
Length = 95
Score = 73.7 bits (173), Expect = 2e-12
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G CKWFN KG+GFIT ++ G+DVFVHQS + GFRSL + E+VE E + +A
Sbjct: 6 GVCKWFNNKKGYGFITLEN-GEDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRKKAIH 64
Query: 65 VTGPNGTDCHGSD 77
VTGPNGT G++
Sbjct: 65 VTGPNGTHVTGTN 77
>UniRef50_P72366 Cluster: Cold shock-like protein cspA; n=29;
Bacteria|Rep: Cold shock-like protein cspA -
Stigmatella aurantiaca
Length = 68
Score = 73.3 bits (172), Expect = 2e-12
Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN AKG+GFIT D GG+DVF H S + M GFR+L + ++VEFE KGL+A
Sbjct: 4 GTVKWFNDAKGFGFITQDGGGEDVFCHHSAINMDGFRTLQEGQKVEFEVTRGPKGLQAQN 63
Query: 65 V 65
V
Sbjct: 64 V 64
>UniRef50_UPI00005843EB Cluster: PREDICTED: similar to Y-Box factor;
n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Y-Box factor - Strongylocentrotus purpuratus
Length = 326
Score = 72.9 bits (171), Expect = 3e-12
Identities = 44/90 (48%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGD-EEVEFECKESD 57
K G KWFNV G+GFI DD +DVFVHQS + RS+GD E VEF+ E
Sbjct: 23 KVSGTVKWFNVKNGYGFINRDDTKEDVFVHQSAIVRNNPRKYQRSVGDGEVVEFDVVEGT 82
Query: 58 KGLEATRVTGPNGTDCHGSDRRPLSKIRFR 87
KG EA RVTGP G GS + K R+R
Sbjct: 83 KGNEAARVTGPEGAPVVGS-KYAADKRRYR 111
>UniRef50_Q90650 Cluster: Rous sarcoma virus transcription enhancer
factor II; n=1; Gallus gallus|Rep: Rous sarcoma virus
transcription enhancer factor II - Gallus gallus
(Chicken)
Length = 298
Score = 72.9 bits (171), Expect = 3e-12
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFR----SLGD-EEVEFECKESDKGL 60
G KWFNV G+GFI +D +DVFVHQ+ ++ R S+GD E VEF+ E +KG
Sbjct: 90 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEGEKGA 149
Query: 61 EATRVTGPNGTDCHGSDRRPLSKIRFRK 88
EA VTGP+G GS R + R+R+
Sbjct: 150 EAANVTGPDGVPVEGS-RYAADRRRYRR 176
>UniRef50_P91306 Cluster: Y-box protein 2; n=2; Caenorhabditis
elegans|Rep: Y-box protein 2 - Caenorhabditis elegans
Length = 267
Score = 72.5 bits (170), Expect = 4e-12
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG-----FRSLG-DEEVEFECKESDK 58
+G+ KW++V + +GFI+ +DG +D+FVHQ+ + R+LG DEEV F+ E
Sbjct: 67 QGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGKN 126
Query: 59 GLEATRVTGPNGTDCHGSDRRPLSKIRFRKIR 90
G EA VTGPNG + GS R RFRK R
Sbjct: 127 GPEAANVTGPNGDNVIGSRYRHKLLSRFRKNR 158
>UniRef50_P67809 Cluster: Nuclease sensitive element-binding protein
1; n=65; Coelomata|Rep: Nuclease sensitive
element-binding protein 1 - Homo sapiens (Human)
Length = 324
Score = 72.5 bits (170), Expect = 4e-12
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGD-EEVEFECKESDKGL 60
G KWFNV G+GFI +D +DVFVHQ+ ++ RS+GD E VEF+ E +KG
Sbjct: 61 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 120
Query: 61 EATRVTGPNGTDCHGS 76
EA VTGP G GS
Sbjct: 121 EAANVTGPGGVPVQGS 136
>UniRef50_Q016S2 Cluster: Putative nucleic acid binding protein;
n=1; Ostreococcus tauri|Rep: Putative nucleic acid
binding protein - Ostreococcus tauri
Length = 125
Score = 72.1 bits (169), Expect = 5e-12
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 10/78 (12%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFR-------SLGDEEVEFECKE 55
+RRG+ KWFN KG+G+ITPDDG DVFVHQS L+M GFR + + VEF+ +
Sbjct: 10 RRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVEH 69
Query: 56 ---SDKGLEATRVTGPNG 70
+D+ L+A VTG G
Sbjct: 70 ESPTDERLKAVCVTGIGG 87
>UniRef50_Q4H2L8 Cluster: Y-box protein 1/2/3; n=2; Ciona
intestinalis|Rep: Y-box protein 1/2/3 - Ciona
intestinalis (Transparent sea squirt)
Length = 320
Score = 71.7 bits (168), Expect = 6e-12
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVL----QMPGFRSLGD-EEVEFECKESDKGL 60
G KWFNV G+GF+ DD +DVF+HQ+ + RS+GD E VEF+ E +KGL
Sbjct: 28 GVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVVEGEKGL 87
Query: 61 -EATRVTGPNGTDCHGS 76
EA VTGPNG GS
Sbjct: 88 PEAANVTGPNGEPVKGS 104
>UniRef50_P0A975 Cluster: Cold shock-like protein cspE; n=28;
Bacteria|Rep: Cold shock-like protein cspE - Shigella
flexneri
Length = 69
Score = 71.7 bits (168), Expect = 6e-12
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
K +G KWFN +KG+GFITP+DG +DVFVH S +Q GF++L + + VEFE KG
Sbjct: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62
Query: 62 ATRV 65
A V
Sbjct: 63 AANV 66
>UniRef50_Q5JKD6 Cluster: Cold shock domain protein 2-like
protein; n=3; Oryza sativa|Rep: Cold shock domain
protein 2-like protein - Oryza sativa subsp. japonica
(Rice)
Length = 221
Score = 71.3 bits (167), Expect = 9e-12
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEV-EFECKESDKG-LEA 62
+G K F+ G+ FITPDDG +D+F+HQS L+ G+RSL D++V E SD G +A
Sbjct: 7 KGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRTKA 66
Query: 63 TRVTGPNGTDCHGSDRRP 80
VT P G+D H RP
Sbjct: 67 VDVTAP-GSDAHTGGSRP 83
>UniRef50_Q013V8 Cluster: Glycogen debranching enzyme; n=1;
Ostreococcus tauri|Rep: Glycogen debranching enzyme -
Ostreococcus tauri
Length = 141
Score = 71.3 bits (167), Expect = 9e-12
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-------EEVEFECKES 56
RR + WFN +G+G++ P DG +DVFVHQS LQM GFRS+ + +E+EFE +
Sbjct: 40 RREQVTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFEL-DD 98
Query: 57 DKGLEATRVTGPNGTDCHGSDRRPLSKIR 85
D+ A VTGP G + ++ ++R
Sbjct: 99 DERRRAKNVTGPAGAPLKKTPKQFYRRVR 127
>UniRef50_Q83RI9 Cluster: Cold shock-like protein cspC; n=38;
Gammaproteobacteria|Rep: Cold shock-like protein cspC -
Shigella flexneri
Length = 69
Score = 71.3 bits (167), Expect = 9e-12
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
K +G+ KWFN +KG+GFITP DG +DVFVH S +Q G ++L + + VEFE ++ KG
Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGLKTLAEGQNVEFEIQDGQKGPA 62
Query: 62 ATRVT 66
A VT
Sbjct: 63 AVNVT 67
>UniRef50_Q8IT93 Cluster: Y-box protein Ct-p50; n=4;
Endopterygota|Rep: Y-box protein Ct-p50 - Chironomus
tentans (Midge)
Length = 317
Score = 70.9 bits (166), Expect = 1e-11
Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVL----QMPGFRSLGD-EEVEFECKESD 57
K G KWFNV G+GFI +D QD+FVHQS + RS+GD E VEF+ +
Sbjct: 29 KVTGTVKWFNVKSGYGFINRNDNKQDIFVHQSAIIKNNPKKAVRSVGDGEVVEFDVVAGE 88
Query: 58 KGLEATRVTGPNGTDCHGS 76
KG EA VTGP G GS
Sbjct: 89 KGSEAANVTGPEGEPVKGS 107
>UniRef50_O46173 Cluster: Y-box protein; n=5; cellular
organisms|Rep: Y-box protein - Drosophila melanogaster
(Fruit fly)
Length = 359
Score = 70.1 bits (164), Expect = 2e-11
Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVL---QMPGFRSLGD-EEVEFECKESDK 58
K G KWFNV G+GFI +D +DVFVHQS + RS+GD E VEF+ +K
Sbjct: 62 KVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVIGEK 121
Query: 59 GLEATRVTGPNGTDCHGSDRRPLSKIRFR 87
G EA VTGP+G GS + FR
Sbjct: 122 GNEAANVTGPSGEPVRGSQFAADKRRNFR 150
>UniRef50_Q08VT0 Cluster: Conserved domain protein; n=2;
Bacteria|Rep: Conserved domain protein - Stigmatella
aurantiaca DW4/3-1
Length = 100
Score = 69.7 bits (163), Expect = 3e-11
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN AKG+GFIT D GG+DVF H + + M GFR+L + ++V+F+ KGL+A
Sbjct: 37 GTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQAQN 96
Query: 65 V 65
V
Sbjct: 97 V 97
>UniRef50_P54584 Cluster: Cold shock protein; n=6; Bacteria|Rep:
Cold shock protein - Arthrobacter globiformis
Length = 67
Score = 69.7 bits (163), Expect = 3e-11
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDE-EVEFECKESDKGLEAT 63
+G KWFN KG+GFITPDD DVFVH S +Q GF++L + V+FE + KG +AT
Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQAT 62
Query: 64 RVT 66
VT
Sbjct: 63 GVT 65
>UniRef50_A0NEN6 Cluster: ENSANGP00000031633; n=12; cellular
organisms|Rep: ENSANGP00000031633 - Anopheles gambiae
str. PEST
Length = 166
Score = 68.5 bits (160), Expect = 6e-11
Identities = 40/90 (44%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVL----QMPGFRSLGD-EEVEFECKESD 57
K G KWFNV G+GFI D +DVFVHQS + RS+GD E+VEF+ +
Sbjct: 9 KVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIGE 68
Query: 58 KGLEATRVTGPNGTDCHGSDRRPLSKIRFR 87
KG EA VTGP G GS + FR
Sbjct: 69 KGNEAANVTGPQGEPVKGSQYAAEKRRGFR 98
>UniRef50_P0A9Y2 Cluster: Cold shock protein cspA; n=39;
Gammaproteobacteria|Rep: Cold shock protein cspA -
Salmonella typhimurium
Length = 70
Score = 68.5 bits (160), Expect = 6e-11
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
K G KWFN KG+GFITPDDG +DVFVH S +Q G++SL + ++V F + KG
Sbjct: 4 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPA 63
Query: 62 ATRVT 66
A VT
Sbjct: 64 AGNVT 68
>UniRef50_A5BWB0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 189
Score = 67.7 bits (158), Expect = 1e-10
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG-LEAT 63
G KWF+ KG+GFI PDDGG+D+FVHQ+ ++ GFR+L + E VEF + G +A
Sbjct: 9 GTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDGRTKAV 68
Query: 64 RVTGPNGTDCHG 75
VT G+ G
Sbjct: 69 EVTAVRGSYSSG 80
>UniRef50_P39818 Cluster: Cold shock-like protein cspJ; n=7;
Bacteria|Rep: Cold shock-like protein cspJ - Salmonella
typhimurium
Length = 70
Score = 67.7 bits (158), Expect = 1e-10
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
K G KWFN KG+GFITP DG +DVFVH S +Q FR+L + +EVEF ++ KG
Sbjct: 4 KITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGPS 63
Query: 62 ATRV 65
A V
Sbjct: 64 AVNV 67
>UniRef50_P0A981 Cluster: Cold shock-like protein cspG; n=154;
Bacteria|Rep: Cold shock-like protein cspG - Shigella
flexneri
Length = 70
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
K G KWFN KG+GFITPDDG +DVFVH + +Q FR+L + ++VEF ++ +G
Sbjct: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63
Query: 62 ATRV 65
A V
Sbjct: 64 AANV 67
>UniRef50_Q74BX3 Cluster: Cold shock domain family protein; n=13;
cellular organisms|Rep: Cold shock domain family
protein - Geobacter sulfurreducens
Length = 66
Score = 67.3 bits (157), Expect = 1e-10
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
GR KWFN AKG+GFI D G+DVFVH S +Q GF+SL + E+V F+ KGL+A
Sbjct: 4 GRVKWFNDAKGFGFI-EQDNGEDVFVHFSAIQQDGFKSLAEGEQVSFDVVNGPKGLQAAN 62
Query: 65 V 65
V
Sbjct: 63 V 63
>UniRef50_A2A246 Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-box
protein - Bombyx mori (Silk moth)
Length = 272
Score = 67.3 bits (157), Expect = 1e-10
Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVL----QMPGFRSLGD-EEVEFECKESD 57
K G KWFNV G+GFI +D +DVFVHQ+ + RS+GD E VEF +
Sbjct: 37 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGE 96
Query: 58 KGLEATRVTGPNGTDCHGS 76
KG EA VTGP G GS
Sbjct: 97 KGFEAAGVTGPGGEPVKGS 115
>UniRef50_Q2JGE4 Cluster: Cold-shock DNA-binding domain protein;
n=9; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Frankia sp. (strain CcI3)
Length = 67
Score = 66.9 bits (156), Expect = 2e-10
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEAT 63
+G KWFN KG+GFI+ D GG DVFVH S +QM G+++L + + VEF+ + KG +A
Sbjct: 3 QGTVKWFNSEKGFGFISVDGGGSDVFVHYSAIQMDGYKALEEGQRVEFQVTQGQKGPQAD 62
Query: 64 RV 65
V
Sbjct: 63 AV 64
>UniRef50_P0A971 Cluster: Cold shock-like protein cspD; n=12;
Gammaproteobacteria|Rep: Cold shock-like protein cspD -
Shigella flexneri
Length = 74
Score = 66.9 bits (156), Expect = 2e-10
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEAT 63
+G KWFN AKG+GFI P+ GG+D+F H S +QM G+R+L + V+F+ + KG A+
Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62
>UniRef50_Q5MGM1 Cluster: Putative uncharacterized protein; n=4;
cellular organisms|Rep: Putative uncharacterized protein
- Lonomia obliqua (Moth)
Length = 254
Score = 66.5 bits (155), Expect = 2e-10
Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVL----QMPGFRSLGD-EEVEFECKESD 57
K G KWFNV G+GFI +D +DVFVHQ+ + RS+GD E VEF +
Sbjct: 28 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEVVEFAVVAGE 87
Query: 58 KGLEATRVTGPNGTDCHGS 76
KG EA VTGP G GS
Sbjct: 88 KGCEAAGVTGPGGEPVKGS 106
>UniRef50_A0YBV1 Cluster: CspA-like protein; n=17;
Proteobacteria|Rep: CspA-like protein - marine gamma
proteobacterium HTCC2143
Length = 91
Score = 66.1 bits (154), Expect = 3e-10
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATR 64
G KWFN AKG+GFI P+ GG DVF H S + M G+++L + V F+ KGL AT
Sbjct: 4 GTVKWFNNAKGFGFILPEGGGADVFAHYSTISMDGYKTLKAGQPVSFDTVNGPKGLHATN 63
Query: 65 VTGPNGTDCHGSDRRPLSKIR 85
+ + S+ R + IR
Sbjct: 64 IQAAQDS-ADNSNPRAVDDIR 83
>UniRef50_Q1QAP9 Cluster: Cold-shock DNA-binding domain protein;
n=5; cellular organisms|Rep: Cold-shock DNA-binding
domain protein - Psychrobacter cryohalolentis (strain
K5)
Length = 71
Score = 65.7 bits (153), Expect = 4e-10
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
+ +G KWFN +KG+GFI D G +D+FVH +Q G+RSL D E+VEF E DKGL+
Sbjct: 4 REQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDKGLQ 62
Query: 62 ATRV 65
A V
Sbjct: 63 AEEV 66
>UniRef50_P46449 Cluster: Cold shock-like protein cspD; n=31;
Bacteria|Rep: Cold shock-like protein cspD -
Haemophilus influenzae
Length = 72
Score = 65.7 bits (153), Expect = 4e-10
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATR 64
G KWFN AKG+GFI+ + D+F H SV++M G+RSL ++V+FE SDKG AT+
Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63
Query: 65 V 65
+
Sbjct: 64 I 64
>UniRef50_Q9S1B7 Cluster: Cold shock-like protein cspA; n=10;
Bacteria|Rep: Cold shock-like protein cspA - Shewanella
violacea
Length = 70
Score = 65.3 bits (152), Expect = 6e-10
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN KG+GF+T D+GG DVFVH + GF++L + ++V FE ++ KGL+A+
Sbjct: 7 GTVKWFNEDKGFGFLTQDNGGADVFVHFRAIASEGFKTLDEGQKVTFEVEQGPKGLQASN 66
Query: 65 V 65
V
Sbjct: 67 V 67
>UniRef50_Q87NH9 Cluster: Cold shock transcriptional regulator
CspA; n=21; Bacteria|Rep: Cold shock transcriptional
regulator CspA - Vibrio parahaemolyticus
Length = 70
Score = 64.9 bits (151), Expect = 7e-10
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
K G KWFN KG+GFI+P++GG+D+FVH + GF++L + ++V + ++ KGL+
Sbjct: 4 KSTGSVKWFNETKGFGFISPENGGEDLFVHFQSIVSTGFKTLSEGQKVSYVVEQGKKGLQ 63
Query: 62 ATRVT 66
A VT
Sbjct: 64 AGEVT 68
>UniRef50_Q9ZFK8 Cluster: CspB; n=4; cellular organisms|Rep: CspB
- Myxococcus xanthus
Length = 66
Score = 64.5 bits (150), Expect = 1e-09
Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN AKG+GFI D G+DVF H + + M GFR+L + ++VEFE KGL+A
Sbjct: 4 GTVKWFNDAKGFGFIA-QDNGEDVFCHHTAINMDGFRTLQEGQQVEFEVTRGPKGLQAQN 62
Query: 65 V 65
V
Sbjct: 63 V 63
>UniRef50_P0A353 Cluster: Cold shock-like protein cspA; n=288;
Bacteria|Rep: Cold shock-like protein cspA - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 67
Score = 63.3 bits (147), Expect = 2e-09
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN KG+GFITP+ GG+D+F H S +Q GF+SL + + V F KG +AT+
Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRVSFVTAMGPKGPQATK 63
Query: 65 V 65
+
Sbjct: 64 I 64
>UniRef50_Q2J4H7 Cluster: Cold-shock DNA-binding domain protein;
n=13; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Frankia sp. (strain CcI3)
Length = 67
Score = 62.9 bits (146), Expect = 3e-09
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEAT 63
+G KWFN KG+GFI+ D GG DVFVH S + G++SL + + V+FE + KG +A
Sbjct: 3 QGTVKWFNAEKGFGFISVDGGGPDVFVHYSSIVADGYKSLDEGQSVQFEIVQGQKGPQAD 62
Query: 64 RV 65
V
Sbjct: 63 NV 64
>UniRef50_Q9XSU1 Cluster: DNA binding protein; n=3; Amniota|Rep:
DNA binding protein - Canis familiaris (Dog)
Length = 96
Score = 62.9 bits (146), Expect = 3e-09
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 12 NVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGD-EEVEFECKESDKGLEATRVT 66
NV G+GFI +D +DVFVHQ+ ++ RS+GD E V+F+ E +KG EA VT
Sbjct: 1 NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVQFDVVEGEKGAEAANVT 60
Query: 67 GPNGTDCHGSDRRPLSKIRFRK 88
GP+G GS R + R+R+
Sbjct: 61 GPDGVPVEGS-RYAADRRRYRR 81
>UniRef50_P72188 Cluster: Cold shock protein capA; n=23;
Proteobacteria|Rep: Cold shock protein capA -
Pseudomonas fragi
Length = 64
Score = 62.9 bits (146), Expect = 3e-09
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
++ G KWFN KG+GFITP GG D+FVH ++ GF+SL + + V F ++ KG++
Sbjct: 4 RQSGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQ 63
Query: 62 A 62
A
Sbjct: 64 A 64
>UniRef50_A3VSH0 Cluster: Cold shock protein; n=1; Parvularcula
bermudensis HTCC2503|Rep: Cold shock protein -
Parvularcula bermudensis HTCC2503
Length = 173
Score = 62.1 bits (144), Expect = 5e-09
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECK--ESDKGLEA 62
RG KWF+ KG+GFIT + GG+DV +H S L+ G R+ E C+ ES+KGL+A
Sbjct: 15 RGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSG-RATAPEGAIVTCEAIESEKGLQA 73
Query: 63 TRVTGPNGTDCHGSDRRPLSKI 84
TR+ ++ + R P +++
Sbjct: 74 TRIINLEISELNTITRPPATRM 95
Score = 44.8 bits (101), Expect = 8e-04
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 9 KWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATRVTG 67
KWF+ AKG+GF+T + +D+FVH V++ G L + + KGL A +
Sbjct: 110 KWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAIEP 169
Query: 68 P 68
P
Sbjct: 170 P 170
>UniRef50_Q835L0 Cluster: Cold-shock domain family protein; n=24;
Bacteria|Rep: Cold-shock domain family protein -
Enterococcus faecalis (Streptococcus faecalis)
Length = 66
Score = 61.7 bits (143), Expect = 7e-09
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN KG+GFIT ++ G DVFVH S +Q GF++L + + V FE +E +G +AT
Sbjct: 4 GTVKWFNSDKGFGFITAEN-GNDVFVHFSAIQGDGFKTLEEGQAVTFEIEEGQRGPQATN 62
Query: 65 VT 66
VT
Sbjct: 63 VT 64
>UniRef50_Q0I3L0 Cluster: Cold shock-like protein; n=2;
Proteobacteria|Rep: Cold shock-like protein -
Haemophilus somnus (strain 129Pt) (Histophilus somni
(strain 129Pt))
Length = 69
Score = 61.3 bits (142), Expect = 9e-09
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATR 64
G KWFN AKG+GF++ + DVF H SV++M G+RSL ++V+ E DKG AT+
Sbjct: 4 GIVKWFNNAKGFGFLSVESSDVDVFAHYSVIEMEGYRSLKAGQKVQCEVVHGDKGSHATK 63
Query: 65 V 65
+
Sbjct: 64 I 64
>UniRef50_A5ZXC4 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized
protein - Ruminococcus obeum ATCC 29174
Length = 66
Score = 61.3 bits (142), Expect = 9e-09
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEAT 63
+G KWFN KG+GFIT +DG DVFVH S + GF+SL + + V ++ E +G++A
Sbjct: 3 KGTVKWFNAEKGYGFITGEDGA-DVFVHFSAINGEGFKSLDEGQAVTYDLTEGARGMQAA 61
Query: 64 RVT 66
VT
Sbjct: 62 NVT 64
>UniRef50_A4BC11 Cluster: Cold shock protein; n=1; Reinekea sp.
MED297|Rep: Cold shock protein - Reinekea sp. MED297
Length = 153
Score = 61.3 bits (142), Expect = 9e-09
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
+ G KWFNV+KG+GF+T D+ G+DVFVH ++ G RSL + + V F ES KGL+
Sbjct: 85 REEGLVKWFNVSKGFGFVTRDN-GEDVFVHFRSIRGRGHRSLQEGQRVRFGVVESSKGLQ 143
Query: 62 ATRVT 66
A VT
Sbjct: 144 AEDVT 148
>UniRef50_P62169 Cluster: Cold shock-like protein cspC; n=26;
cellular organisms|Rep: Cold shock-like protein cspC -
Bacillus anthracis
Length = 65
Score = 61.3 bits (142), Expect = 9e-09
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEAT 63
+GR KWFN KG+GFI +D G DVFVH S +Q G++SL + ++VEF+ + +G +A
Sbjct: 2 QGRVKWFNAEKGFGFIERED-GDDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQAA 60
Query: 64 RV 65
V
Sbjct: 61 NV 62
>UniRef50_Q1N1Z0 Cluster: Cold shock protein; n=14; Bacteria|Rep:
Cold shock protein - Oceanobacter sp. RED65
Length = 171
Score = 60.9 bits (141), Expect = 1e-08
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
+ RG KWFNV KG+GFIT D+ G+DVFVH ++ G RSL + + V+F + KGL+
Sbjct: 105 RERGLVKWFNVKKGFGFITRDN-GEDVFVHFRSIRGTGHRSLSEGQNVKFSVVDGQKGLQ 163
Query: 62 ATRVT 66
A V+
Sbjct: 164 AEDVS 168
>UniRef50_P0A363 Cluster: Cold shock-like protein cspB; n=367;
root|Rep: Cold shock-like protein cspB - Yersinia
enterocolitica
Length = 70
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
K G KWF+ KG+GFI+P DG +DVFVH S +Q +++L + + VEF ++ KG
Sbjct: 4 KMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGPS 63
Query: 62 ATRV 65
A V
Sbjct: 64 AVNV 67
>UniRef50_Q9I0L6 Cluster: Cold-shock protein CspD; n=12;
Gammaproteobacteria|Rep: Cold-shock protein CspD -
Pseudomonas aeruginosa
Length = 90
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATR 64
G+ KWFN AKG+GFI + +D+F H S +QM G+++L + V FE + KGL A
Sbjct: 4 GKVKWFNNAKGYGFILAEGRDEDLFAHYSAIQMDGYKTLKAGQPVNFEIIQGPKGLHAIN 63
Query: 65 VTGPNGTDCHGSDRRP 80
++ T S P
Sbjct: 64 ISPATATTAAPSAPAP 79
>UniRef50_Q0BPU3 Cluster: Cold shock protein; n=1; Granulibacter
bethesdensis CGDNIH1|Rep: Cold shock protein -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 100
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
G KWFN KG+GFI P G +DVFVH S +Q G RSL + ++++FE ++ G A
Sbjct: 35 GTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRAA 92
>UniRef50_A6E2L2 Cluster: Cold-shock DNA-binding domain protein;
n=19; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Roseovarius sp. TM1035
Length = 68
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
G KWFN KG+GFI PD+GG+DVFVH S ++ G L D ++V F+ + G E+
Sbjct: 4 GTVKWFNSTKGFGFIAPDNGGKDVFVHISAVERAGLTGLADNQKVTFDIESGRDGRES 61
>UniRef50_Q9AN51 Cluster: ID534; n=52; Bacteria|Rep: ID534 -
Bradyrhizobium japonicum
Length = 120
Score = 60.1 bits (139), Expect = 2e-08
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
G KWFN KG+GF+ PDDGG+DVFVH S ++ G+ SL + +V +E + G +A
Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQA 113
>UniRef50_Q7D268 Cluster: AGR_C_161p; n=7; Proteobacteria|Rep:
AGR_C_161p - Agrobacterium tumefaciens (strain C58 /
ATCC 33970)
Length = 163
Score = 59.7 bits (138), Expect = 3e-08
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFE 52
V G KWFN KG+GFI PDDG QDVFVH S ++ G +L D +++ +E
Sbjct: 94 VMATGTVKWFNATKGYGFIQPDDGSQDVFVHISAVERAGLTALNDGQKLSYE 145
>UniRef50_Q2BKV8 Cluster: Cold-shock domain family protein; n=3;
Bacteria|Rep: Cold-shock domain family protein -
Neptuniibacter caesariensis
Length = 149
Score = 59.7 bits (138), Expect = 3e-08
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
+ +G KWFNV+KG+GFIT + DVFVH ++ G RSL + ++V F +ESDKGL+
Sbjct: 82 REQGTVKWFNVSKGFGFITRGE-DDDVFVHFRNIRGRGHRSLAEGQKVRFYVRESDKGLQ 140
Query: 62 ATRVT 66
A V+
Sbjct: 141 AEDVS 145
>UniRef50_A5NZH6 Cluster: Putative cold-shock DNA-binding domain
protein precursor; n=1; Methylobacterium sp. 4-46|Rep:
Putative cold-shock DNA-binding domain protein precursor
- Methylobacterium sp. 4-46
Length = 242
Score = 59.7 bits (138), Expect = 3e-08
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KW++ AKG+GF++ DGG+DVFVH+S L G SL + ++V E KG EA
Sbjct: 178 GTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKGREAQS 237
Query: 65 VT 66
+T
Sbjct: 238 IT 239
Score = 43.6 bits (98), Expect = 0.002
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRS-LGDEEVEFECKESDKG 59
G +R KWFN KG+GF+ DG D F+H ++ G L + + + KG
Sbjct: 59 GPERDATVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKG 118
Query: 60 LEATRVT 66
+ T +T
Sbjct: 119 PQVTNIT 125
>UniRef50_A1CFX7 Cluster: Cold shock NA binding domain protein; n=2;
cellular organisms|Rep: Cold shock NA binding domain
protein - Aspergillus clavatus
Length = 125
Score = 59.3 bits (137), Expect = 4e-08
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
++ G KWFN KG+GFITP+ G+D+FVH ++ GF+SL + ++V FE + KG +
Sbjct: 59 RQNGTVKWFNDEKGYGFITPET-GEDLFVHFRAVEGNGFKSLKEGQKVTFEAVQGQKGRQ 117
Query: 62 ATRV 65
A +V
Sbjct: 118 ADKV 121
>UniRef50_Q5FNZ7 Cluster: Cold shock protein; n=1; Gluconobacter
oxydans|Rep: Cold shock protein - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 96
Score = 58.8 bits (136), Expect = 5e-08
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG 59
V G KWFN KG+GFI PD+GGQD FVH S L+ G +L + + V +E + G
Sbjct: 28 VMATGTVKWFNSTKGFGFIQPDNGGQDAFVHISELERAGMHTLNEGQHVSYELESGRNG 86
>UniRef50_Q4F6X8 Cluster: Cold shock protein; n=6;
Gammaproteobacteria|Rep: Cold shock protein -
Pseudomonas fluorescens
Length = 69
Score = 58.4 bits (135), Expect = 6e-08
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
++ G KWFN KG+GFITP GG D+FVH Q GF+SL + ++V F KGL+
Sbjct: 4 RQTGTVKWFNDEKGFGFITPQGGGDDLFVH-FPFQGTGFKSLQEGQKVSFVVVNGQKGLQ 62
Query: 62 ATRV 65
A V
Sbjct: 63 ADEV 66
>UniRef50_A7DA86 Cluster: Putative cold-shock DNA-binding domain
protein; n=3; Methylobacterium extorquens PA1|Rep:
Putative cold-shock DNA-binding domain protein -
Methylobacterium extorquens PA1
Length = 69
Score = 58.4 bits (135), Expect = 6e-08
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFE 52
G KWFN KG+GFI PD+GG+DVFVH S ++ G R L + ++V +E
Sbjct: 4 GTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRDLAEGQKVTYE 51
>UniRef50_A4VMZ2 Cluster: Cold shock protein CspA; n=12;
Bacteria|Rep: Cold shock protein CspA - Pseudomonas
stutzeri (strain A1501)
Length = 136
Score = 58.0 bits (134), Expect = 8e-08
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
+ G KWFN AKG+GFI +G DVFVH ++ G RSL + ++VEF + KGL+
Sbjct: 71 RETGTVKWFNDAKGYGFIQRGNGA-DVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQKGLQ 129
Query: 62 ATRVTG 67
A V G
Sbjct: 130 AEDVAG 135
>UniRef50_Q6YPQ4 Cluster: Cold shock protein; n=3; Firmicutes|Rep:
Cold shock protein - Onion yellows phytoplasma
Length = 74
Score = 57.6 bits (133), Expect = 1e-07
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMP--GFRSLGD-EEVEFECKESDKG 59
K++G C+WF+ KG+GFI D G+D+FVH S +Q G ++L + ++VEF KE D+G
Sbjct: 5 KQQGTCRWFSKDKGYGFIVSVD-GKDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63
Query: 60 LEATRVTGPN 69
+A V N
Sbjct: 64 AQAVDVVVVN 73
>UniRef50_Q6N3M1 Cluster: Cold shock DNA binding protein; n=78;
Bacteria|Rep: Cold shock DNA binding protein -
Rhodopseudomonas palustris
Length = 84
Score = 57.6 bits (133), Expect = 1e-07
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFE 52
G KWFN KG+GFI PDDGG DVFVH S ++ G +L + +++ +E
Sbjct: 18 GTVKWFNATKGYGFIQPDDGGNDVFVHISAVERAGLGTLREGQKISYE 65
>UniRef50_P39158 Cluster: Cold shock protein cspC; n=41;
Bacteria|Rep: Cold shock protein cspC - Bacillus
subtilis
Length = 66
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEAT 63
+G KWFN KG+GFI ++ G DVFVH S +Q GF+SL + ++V F+ ++ +G +A
Sbjct: 3 QGTVKWFNAEKGFGFIEREN-GDDVFVHFSAIQSDGFKSLDEGQKVSFDVEQGARGAQAA 61
Query: 64 RV 65
V
Sbjct: 62 NV 63
>UniRef50_Q8KES2 Cluster: Cold shock-like protein CspG; n=9;
Chlorobiaceae|Rep: Cold shock-like protein CspG -
Chlorobium tepidum
Length = 97
Score = 57.2 bits (132), Expect = 1e-07
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVH-QSVLQMPGFRSLG-DEEVEFECKESDKGLEA 62
+ + KWF+ KG+GFI DGG+D+FVH S++ F+ L D +VE++ ++ KGL+A
Sbjct: 3 KSKVKWFDGKKGYGFILNPDGGEDIFVHFSSIISDQSFKVLNQDADVEYDLDKTQKGLQA 62
Query: 63 TRV 65
V
Sbjct: 63 KNV 65
>UniRef50_A0ACJ4 Cluster: Putative DNA-binding protein; n=3;
Actinomycetales|Rep: Putative DNA-binding protein -
Streptomyces ambofaciens ATCC 23877
Length = 172
Score = 57.2 bits (132), Expect = 1e-07
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLG-DEEVEFECKESDKGLEATR 64
G+ F+ +G+GFI PD+GG+DVF+H + L R LG +VEF+ +E D+GL+A+R
Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67
Query: 65 VTGPNGT 71
V NG+
Sbjct: 68 VRIQNGS 74
>UniRef50_Q9Z3S6 Cluster: Cold shock protein cspA; n=59;
Alphaproteobacteria|Rep: Cold shock protein cspA -
Rhizobium meliloti (Sinorhizobium meliloti)
Length = 69
Score = 57.2 bits (132), Expect = 1e-07
Identities = 24/39 (61%), Positives = 27/39 (69%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL 44
G KWFN KG+GFI PDDG DVFVH S ++ G RSL
Sbjct: 4 GTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSL 42
>UniRef50_Q8YIC6 Cluster: COLD SHOCK PROTEIN CSPA; n=4;
Brucella|Rep: COLD SHOCK PROTEIN CSPA - Brucella
melitensis
Length = 101
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFE 52
G KWFN KG+GFI PD GG DVFVH S +Q G +L + ++V +E
Sbjct: 36 GTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYE 83
>UniRef50_Q2S3Y3 Cluster: 'Cold-shock' DNA-binding domain,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
'Cold-shock' DNA-binding domain, putative -
Salinibacter ruber (strain DSM 13855)
Length = 69
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATRV 65
G KWF+ A+G+GF+ PD+G DVF+H S ++P + +EFE +E++KGL A +
Sbjct: 4 GTVKWFSPAEGYGFVEPDNGEDDVFLHHS--EVPDEDLEEGDRLEFEIEETEKGLNAVNI 61
>UniRef50_Q4JMV8 Cluster: Predicted cold shock family protein;
n=1; uncultured bacterium BAC17H8|Rep: Predicted cold
shock family protein - uncultured bacterium BAC17H8
Length = 83
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG 59
+G KWFN KG+GFI PD+ G DVFVH + +Q G L + + V +E E G
Sbjct: 17 QGTVKWFNTQKGYGFINPDEDGNDVFVHITAVQNSGLTGLNEGQRVSYELAEQRNG 72
>UniRef50_Q23960 Cluster: Y-box protein; n=2; Dugesia|Rep: Y-box
protein - Dugesia japonica (Planarian)
Length = 266
Score = 56.8 bits (131), Expect = 2e-07
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQS--VLQMPGF--RSLGD-EEVEFECKESDKGL 60
G+ KWFNV +G+GF+ +D +D+F+HQS V P +S+G+ EE+ F+ + KG
Sbjct: 31 GKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAKGN 90
Query: 61 EATRVTGPNGTDCHGSD 77
EA V+ +G GS+
Sbjct: 91 EAANVSAIDGKCVKGSE 107
>UniRef50_Q89E28 Cluster: Cold shock protein; n=8; cellular
organisms|Rep: Cold shock protein - Bradyrhizobium
japonicum
Length = 67
Score = 56.4 bits (130), Expect = 3e-07
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFE 52
+G KWFN KG+GFI P GG+DVFVH S +Q G +L + + VE+E
Sbjct: 4 KGTVKWFNPTKGYGFIQPASGGKDVFVHISAVQKAGLSTLNEGQTVEYE 52
>UniRef50_Q2S0T4 Cluster: Conserved domain protein; n=2;
Bacteroidetes/Chlorobi group|Rep: Conserved domain
protein - Salinibacter ruber (strain DSM 13855)
Length = 110
Score = 56.4 bits (130), Expect = 3e-07
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQM-PGFRSL-GDEEVEFECKESDKGLE 61
R KWF+ KG+GFI D G+DVFVH S +Q F++L D+ V FE + KGL
Sbjct: 2 RTSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLH 61
Query: 62 ATRVTGPNGTDCHGSD 77
A V + + +D
Sbjct: 62 ALEVAPLDDEEAPSAD 77
>UniRef50_Q28L70 Cluster: Cold-shock DNA-binding domain protein;
n=11; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Jannaschia sp. (strain CCS1)
Length = 68
Score = 56.4 bits (130), Expect = 3e-07
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
G KWFN KG+GFI P+ GG+DVFVH S ++ G L D ++V ++ + G E+
Sbjct: 4 GTVKWFNSTKGFGFIAPETGGKDVFVHISAVERSGLTGLADNQKVTYDLEAGRDGRES 61
>UniRef50_A7HXE8 Cluster: Putative cold-shock DNA-binding domain
protein; n=1; Parvibaculum lavamentivorans DS-1|Rep:
Putative cold-shock DNA-binding domain protein -
Parvibaculum lavamentivorans DS-1
Length = 199
Score = 56.0 bits (129), Expect = 3e-07
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWF+ KG+GFI P++GG DV VH S L+ G +L + V E KG +A R
Sbjct: 40 GVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPKGAQAIR 99
Query: 65 VTGPNGT 71
V + T
Sbjct: 100 VVDVDDT 106
Score = 48.8 bits (111), Expect = 5e-05
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 9 KWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRS-LGDEEVEFECKESDKGLEATRV 65
KWFN A+G+GF+T +G D+F+H L+ G R L +++ E KGL +
Sbjct: 139 KWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196
>UniRef50_UPI00015B4254 Cluster: PREDICTED: similar to Y-box protein
Ct-p40; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to Y-box protein Ct-p40 - Nasonia vitripennis
Length = 335
Score = 55.6 bits (128), Expect = 5e-07
Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVL--QMP--GFRSLGD-EEVEFECKESD 57
K G KWFNV G+GFI D+FV Q + +P RS+GD E VEF+ +
Sbjct: 68 KVTGTVKWFNVKSGYGFINRSVFHFDIFVCQRCISNNLPSKAVRSVGDGEVVEFDVVIGE 127
Query: 58 KGLEATRVTGPNGTDCHGS 76
KG EA VTGP+G GS
Sbjct: 128 KGNEAANVTGPDGEAVKGS 146
>UniRef50_Q9ZBH4 Cluster: Putative DNA-binding protein; n=2;
Actinomycetales|Rep: Putative DNA-binding protein -
Streptomyces coelicolor
Length = 162
Score = 55.6 bits (128), Expect = 5e-07
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATRV 65
GR F+ +G+GFI P+DGG+DVF+H + L +P VEFE + ++GL+A+ +
Sbjct: 24 GRVVRFDGTRGYGFIAPEDGGEDVFLHVNDLLIPEESVRSGLVVEFEVESGERGLKASGI 83
Query: 66 TGPNG 70
P G
Sbjct: 84 RLPEG 88
>UniRef50_Q982F0 Cluster: Cold-shock protein; n=3; Mesorhizobium
loti|Rep: Cold-shock protein - Rhizobium loti
(Mesorhizobium loti)
Length = 97
Score = 55.6 bits (128), Expect = 5e-07
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KW+ KG+GFI PD+G +DVFVH S L G +L + ++V C + KGLE
Sbjct: 33 GTVKWYKPEKGFGFIAPDNGEKDVFVHASTLTRSGLSALVEGQKVFVACGQGKKGLEVRS 92
Query: 65 V 65
+
Sbjct: 93 I 93
>UniRef50_Q6N6T9 Cluster: Cold shock DNA binding protein; n=38;
Alphaproteobacteria|Rep: Cold shock DNA binding protein
- Rhodopseudomonas palustris
Length = 235
Score = 55.6 bits (128), Expect = 5e-07
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGL 60
V+ G KWF+ +KG+GF+ PD+G DV +H +VL+ G+++ + + EC + KG
Sbjct: 67 VEISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGY 126
Query: 61 EATRVTG-PNGTDCHGSDRRP 80
+A R+ T H + P
Sbjct: 127 QAFRIVSMDESTAIHPAQMLP 147
Score = 45.2 bits (102), Expect = 6e-04
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEAT 63
R + KWFN +G+GF+T +G D+FVH L+ G L + V KG+ A
Sbjct: 162 RAQVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAA 221
Query: 64 RVTGPNG 70
+ NG
Sbjct: 222 EIQPENG 228
>UniRef50_Q2RQP4 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Cold-shock
DNA-binding domain protein - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 70
Score = 55.2 bits (127), Expect = 6e-07
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKES 56
G KWFNV KG+GFI PDDGG D FVH S ++ RS + C+ES
Sbjct: 4 GTVKWFNVQKGFGFIAPDDGGSDAFVHISAVE----RSSDRSPPGYRCRES 50
>UniRef50_Q8D046 Cluster: Cold shock protein; n=14;
Enterobacteriaceae|Rep: Cold shock protein - Yersinia
pestis
Length = 77
Score = 55.2 bits (127), Expect = 6e-07
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
+ GR KWFN ++G+GFI+P DGG DV+V+++ + +SL + ++VEF S G A
Sbjct: 12 KMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIHGPSA 71
Query: 63 TRV 65
V
Sbjct: 72 ADV 74
>UniRef50_Q3VJZ1 Cluster: Cold-shock protein, DNA-binding
precursor; n=2; Bacteroidetes/Chlorobi group|Rep:
Cold-shock protein, DNA-binding precursor - Pelodictyon
phaeoclathratiforme BU-1
Length = 91
Score = 55.2 bits (127), Expect = 6e-07
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN KG+GFI PD+GG DVFVH + L+ G +L + ++V+++ E + + A
Sbjct: 27 GTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAGN 86
Query: 65 V 65
+
Sbjct: 87 I 87
>UniRef50_A4LXQ2 Cluster: Cold-shock DNA-binding domain protein;
n=1; Geobacter bemidjiensis Bem|Rep: Cold-shock
DNA-binding domain protein - Geobacter bemidjiensis Bem
Length = 92
Score = 55.2 bits (127), Expect = 6e-07
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGL 60
V G KWFN AKG+GFI D G DVFVH S +Q GF+SL + + V F+ + KG
Sbjct: 26 VMANGVVKWFNDAKGFGFI-EQDNGVDVFVHFSSIQGDGFKSLVEGDSVTFDVVQGAKGP 84
Query: 61 EATRV 65
+A V
Sbjct: 85 QAANV 89
>UniRef50_Q17JD9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 192
Score = 55.2 bits (127), Expect = 6e-07
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGDEE-VEFECKESDKGL 60
G KWFN G+GFIT D G+D+FVH+S + P +S+GD E VEF GL
Sbjct: 36 GTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF-------GL 88
Query: 61 EATRVTGPNGTDCHGS 76
A++VTGP GS
Sbjct: 89 IASKVTGPGFKPVKGS 104
>UniRef50_Q9ZCP9 Cluster: Cold shock-like protein cspA; n=12;
Bacteria|Rep: Cold shock-like protein cspA - Rickettsia
prowazekii
Length = 70
Score = 55.2 bits (127), Expect = 6e-07
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKE 55
G+ KW+N K +GFI D+GG+DVFVH+S + G SL + +EV F+ +E
Sbjct: 7 GKVKWYNSTKNFGFIEQDNGGKDVFVHKSAIDAAGLHSLEEGQEVIFDIEE 57
>UniRef50_Q7VLQ6 Cluster: Cold shock-like protein CspD; n=6;
Proteobacteria|Rep: Cold shock-like protein CspD -
Haemophilus ducreyi
Length = 68
Score = 54.8 bits (126), Expect = 8e-07
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLG-DEEVEFECKESDKGLEATR 64
G KWFN KG+GFIT D D+F H S ++ G+RSL ++V+FE +++G AT
Sbjct: 4 GIVKWFNNVKGFGFITCDTVEGDIFAHFSEIKQDGYRSLKVGQKVQFELVTNERGASATH 63
Query: 65 VT 66
++
Sbjct: 64 IS 65
>UniRef50_Q48H64 Cluster: Cold shock domain protein CspD; n=7;
Proteobacteria|Rep: Cold shock domain protein CspD -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 94
Score = 54.8 bits (126), Expect = 8e-07
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 6 GRCKWFNVAKGWGFITPD-DGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEAT 63
G+ KWFN AKG+GFI D D+F H S +QM G+++L + V FE + KGL A
Sbjct: 6 GKVKWFNNAKGYGFIIKDGKPDDDLFAHFSTIQMEGYKTLKAGQPVSFEIIQGPKGLHAV 65
Query: 64 RV 65
+
Sbjct: 66 NI 67
>UniRef50_Q1ZKE8 Cluster: Cold shock protein; n=3;
Gammaproteobacteria|Rep: Cold shock protein - Vibrio
angustum S14
Length = 68
Score = 54.8 bits (126), Expect = 8e-07
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
K G KWFN KG+GFI+ D G+DVFVH S +Q G R+L + + VEF + KG +
Sbjct: 3 KLTGTVKWFNDDKGFGFISGTD-GKDVFVHFSAIQAQGRRTLREGQSVEFIVTDGQKGPQ 61
Query: 62 ATRV 65
A+ V
Sbjct: 62 ASEV 65
>UniRef50_Q9XTJ6 Cluster: Putative uncharacterized protein cey-4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cey-4 - Caenorhabditis elegans
Length = 294
Score = 54.8 bits (126), Expect = 8e-07
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 5 RGRCKWFNVAKGWGFIT---PDDGGQDVFVHQSVLQMPG-----FRSLGDEE-VEFECKE 55
+G KWF+V +GF+ P D +D FVHQ+ + R+L D+E V F+ E
Sbjct: 90 KGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVE 149
Query: 56 SDKGLEATRVTGPNGTDCHGS 76
KG EA VTGP+G + GS
Sbjct: 150 GLKGPEAANVTGPDGENVRGS 170
>UniRef50_Q9PA96 Cluster: Temperature acclimation protein B; n=24;
Bacteria|Rep: Temperature acclimation protein B -
Xylella fastidiosa
Length = 85
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN KG+GFIT + G D+FVH +Q GF+SL + ++V F + KG++A +
Sbjct: 23 GTVKWFNDNKGFGFIT-SNNGPDLFVHYRAIQGNGFKSLQEGQKVSFVAVQGQKGMQADQ 81
Query: 65 V 65
V
Sbjct: 82 V 82
>UniRef50_Q8GI47 Cluster: Cold shock protein homolog; n=5;
Deinococci|Rep: Cold shock protein homolog - Thermus
thermophilus
Length = 73
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEV---EFECKESDKGL 60
++GR KWFN KG+GFI +G DVFVH + + GFR+L + ++ + E + KG
Sbjct: 2 QKGRVKWFNAEKGYGFI-EREGDTDVFVHYTAINAKGFRTLNEGDIVTFDVEPGRNGKGP 60
Query: 61 EATRVT 66
+A VT
Sbjct: 61 QAVNVT 66
>UniRef50_Q5GRS9 Cluster: Cold shock protein; n=3; Wolbachia|Rep:
Cold shock protein - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 84
Score = 54.0 bits (124), Expect = 1e-06
Identities = 29/67 (43%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFR--SLGDEEVEFECKESDKGLEAT 63
G KWFN KG+GFI P+ G D+FVH S L+ G R SL E E K E
Sbjct: 4 GNIKWFNAEKGYGFIKPEANGNDIFVHISTLERSGIRPDSLRGENKEKGIKGERVSYELK 63
Query: 64 RVTGPNG 70
G NG
Sbjct: 64 EERGRNG 70
>UniRef50_Q0YRJ0 Cluster: Cold-shock protein, DNA-binding; n=1;
Chlorobium ferrooxidans DSM 13031|Rep: Cold-shock
protein, DNA-binding - Chlorobium ferrooxidans DSM
13031
Length = 70
Score = 54.0 bits (124), Expect = 1e-06
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVH-QSVLQMPGFRSLG-DEEVEFECKESDKGLEAT 63
G+ KWF+V KG+GFI +GG+D+FVH +++ FR L D +V+FE + L+A
Sbjct: 4 GKVKWFDVRKGFGFILNPNGGEDIFVHFSNIVSEEKFRFLNQDADVDFELEARGNRLQAL 63
Query: 64 RVTGPNG 70
V G
Sbjct: 64 NVREKQG 70
>UniRef50_Q834D5 Cluster: Cold-shock domain family protein; n=1;
Enterococcus faecalis|Rep: Cold-shock domain family
protein - Enterococcus faecalis (Streptococcus
faecalis)
Length = 68
Score = 52.8 bits (121), Expect = 3e-06
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
++G KWF+ KG+GFI ++ ++FVH + ++ GF+SL + + VEFE E ++GL+A
Sbjct: 2 QKGIVKWFDNRKGYGFIVYNE-EDEIFVHFTAIEGDGFKSLDENQSVEFEIMEGNRGLQA 60
Query: 63 TRV 65
V
Sbjct: 61 AHV 63
>UniRef50_Q5ZWM5 Cluster: Cold shock domain family protein; n=6;
Bacteria|Rep: Cold shock domain family protein -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 87
Score = 52.8 bits (121), Expect = 3e-06
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
K RG+ KWFN KG+GFI + G+D FVH S +Q GF++L D V F+ + KG +
Sbjct: 18 KIRGKVKWFNKDKGFGFI--ESSGKDYFVHFSSIQSNGFKTLPDGATVLFKMGKGQKGPQ 75
Query: 62 ATRV 65
A V
Sbjct: 76 AEEV 79
>UniRef50_A3J3Q2 Cluster: Cold shock protein; n=7;
Flavobacteriales|Rep: Cold shock protein -
Flavobacteria bacterium BAL38
Length = 66
Score = 52.8 bits (121), Expect = 3e-06
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEAT 63
R G+ K+FN +KG+GFIT D+ G+D+FVH S +++ GD V +E +E KG A
Sbjct: 2 RTGKVKFFNESKGYGFITDDETGKDIFVHASGMRVESLNE-GD-AVSYEEEEGRKGKVAA 59
Query: 64 RV 65
+V
Sbjct: 60 QV 61
>UniRef50_UPI00015BD510 Cluster: UPI00015BD510 related cluster;
n=1; unknown|Rep: UPI00015BD510 UniRef100 entry -
unknown
Length = 86
Score = 52.4 bits (120), Expect = 4e-06
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVL--QMPGFRSL-GDEEVEFECKESDKGLEA 62
G KWF+ KG+GF+T DD DVFVH S + GF++L + VEFE + KG A
Sbjct: 20 GTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGPRA 79
Query: 63 TRV 65
V
Sbjct: 80 KNV 82
>UniRef50_Q1RHK6 Cluster: Cold shock-like protein cspA; n=2;
Rickettsia bellii RML369-C|Rep: Cold shock-like protein
cspA - Rickettsia bellii (strain RML369-C)
Length = 70
Score = 52.4 bits (120), Expect = 4e-06
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G+ KWFN K +GFI ++GG+DVFVH+S + G L + ++V F+ ++ + + A
Sbjct: 7 GKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNGKISAVN 66
Query: 65 V 65
+
Sbjct: 67 L 67
>UniRef50_Q1GQL9 Cluster: Cold-shock DNA-binding domain protein;
n=30; Proteobacteria|Rep: Cold-shock DNA-binding domain
protein - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 249
Score = 52.0 bits (119), Expect = 6e-06
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG 59
G + G K+FN KG+GFI DDG D FVH S +Q G L + + V F+ + D+G
Sbjct: 178 GERTSGTVKFFNTTKGFGFIARDDGQADAFVHISAVQRAGMAGLEEGDRVAFDIEVDDRG 237
Score = 50.4 bits (115), Expect = 2e-05
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL 44
+G K+FN +KG+GF+ DDGG+DVFVH S ++ G + L
Sbjct: 85 QGTVKFFNPSKGFGFVARDDGGEDVFVHISAVEQAGLQGL 124
>UniRef50_A6NIG4 Cluster: Uncharacterized protein ENSP00000367493;
n=15; Euteleostomi|Rep: Uncharacterized protein
ENSP00000367493 - Homo sapiens (Human)
Length = 59
Score = 52.0 bits (119), Expect = 6e-06
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 92 YNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEK 133
YNCG +H A +C + PQPK+CH C+S H+VA C +K ++
Sbjct: 1 YNCGGLDHH-AKECKLPPQPKKCHFCQSISHVVASCLLKAQQ 41
>UniRef50_Q03YA9 Cluster: Cold shock protein; n=1; Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293|Rep: Cold
shock protein - Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 /NCDO 523)
Length = 74
Score = 51.6 bits (118), Expect = 7e-06
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEA 62
+ G K + +G+G+ITPD+GG DVFVH + + M GF+SL E+V + + K +A
Sbjct: 2 KTGTVKIWQKERGYGYITPDEGGDDVFVHFNGIDMDGFKSLIQGEKVAYVLVQGYKSYQA 61
Query: 63 TRV 65
+V
Sbjct: 62 AQV 64
>UniRef50_Q9KXN2 Cluster: Cold shock protein B; n=7; Bacteria|Rep:
Cold shock protein B - Streptomyces coelicolor
Length = 127
Score = 51.2 bits (117), Expect = 1e-05
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEA 62
G+ KWFN KG+GF++ DDGG DVFVH SVL G SL + VEF +G +A
Sbjct: 4 GKVKWFNSEKGFGFLSRDDGG-DVFVHSSVLP-AGVESLKPGQRVEFGVVAGQRGDQA 59
>UniRef50_Q82ZV8 Cluster: Cold-shock domain family protein; n=7;
cellular organisms|Rep: Cold-shock domain family
protein - Enterococcus faecalis (Streptococcus
faecalis)
Length = 67
Score = 51.2 bits (117), Expect = 1e-05
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
+ G K FN +G+GFI +DG + +FVHQ+ + MPGFR L + + VE+E E + +A
Sbjct: 2 KTGTVKSFNHKRGYGFIIAEDGSE-IFVHQTGICMPGFRKLLEGQAVEYETAEYEGRTKA 60
Query: 63 TRVT 66
VT
Sbjct: 61 VNVT 64
>UniRef50_Q11D48 Cluster: Cold-shock DNA-binding domain protein;
n=11; Proteobacteria|Rep: Cold-shock DNA-binding domain
protein - Mesorhizobium sp. (strain BNC1)
Length = 69
Score = 51.2 bits (117), Expect = 1e-05
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL 44
G K+FN KG+GFI PDDG DVFVH S ++ G R++
Sbjct: 4 GTVKFFNATKGFGFIQPDDGAADVFVHISAVERAGMRTI 42
>UniRef50_Q9KI38 Cluster: Ysb; n=2; Agrobacterium tumefaciens|Rep:
Ysb - Agrobacterium tumefaciens
Length = 100
Score = 50.8 bits (116), Expect = 1e-05
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL 44
G+ KWF+ K +GFITPDDGG DVF+H S + P +L
Sbjct: 4 GKVKWFDATKRFGFITPDDGGPDVFLHLSSITDPACPTL 42
>UniRef50_A5ZS66 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 75
Score = 50.8 bits (116), Expect = 1e-05
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEAT 63
+G KWF+ KG+GFIT +D G D F H S +QM G+R L G + V FE G
Sbjct: 6 QGTVKWFSAQKGYGFITGED-GIDYFAHFSEIQMDGYRKLSGGQPVLFEAGTDANGRSLA 64
Query: 64 RVTGP 68
+ P
Sbjct: 65 KNISP 69
>UniRef50_Q8G880 Cluster: Cold shock protein; n=3;
Bifidobacterium|Rep: Cold shock protein -
Bifidobacterium longum
Length = 79
Score = 50.4 bits (115), Expect = 2e-05
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGD-EEVEFECKESDKG 59
+G K+F KG+GFI PDDGG+DVFVH + ++ G F+ L + + VE+ S KG
Sbjct: 3 QGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKG 62
Query: 60 LEATRV 65
+A V
Sbjct: 63 TQAKDV 68
>UniRef50_Q1GHI4 Cluster: Cold-shock DNA-binding domain protein;
n=19; Rhodobacterales|Rep: Cold-shock DNA-binding
domain protein - Silicibacter sp. (strain TM1040)
Length = 179
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEAT 63
RG KWF+ AKG+GFI D G D+ +H +VL+ G S+ D +E +D+G++A
Sbjct: 12 RGLVKWFDPAKGYGFIVCPDDGPDILLHVNVLRNFGQSSVADGAGIEVVTHRTDRGVQAV 71
Query: 64 RV 65
+
Sbjct: 72 EI 73
Score = 37.5 bits (83), Expect = 0.13
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 7 RCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEE 48
R KWF+ AKG+GF +DVF+H VL+ G + E
Sbjct: 107 RVKWFDKAKGFGFANVFGRDEDVFLHVEVLRQSGLSDVQSGE 148
>UniRef50_A3YG84 Cluster: Cold-shock protein CspD; n=1;
Marinomonas sp. MED121|Rep: Cold-shock protein CspD -
Marinomonas sp. MED121
Length = 92
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATR 64
G KWFN AKG+GFI + +D+F+H S + + G+++L + V F+ +GL A
Sbjct: 4 GTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAVD 63
Query: 65 V 65
+
Sbjct: 64 I 64
>UniRef50_Q1AWL7 Cluster: Cold-shock DNA-binding domain protein;
n=3; Bacteria|Rep: Cold-shock DNA-binding domain protein
- Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129)
Length = 197
Score = 50.0 bits (114), Expect = 2e-05
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
+ +GR KWF+ KG+GF+ GG+D+FVH S ++ SLG EVE+E +++G
Sbjct: 133 REQGRVKWFDPEKGYGFLV-RPGGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERGPN 190
Query: 62 ATRV 65
A RV
Sbjct: 191 ARRV 194
>UniRef50_Q0SKK0 Cluster: Cold shock protein; n=20; Bacteria|Rep:
Cold shock protein - Rhodococcus sp. (strain RHA1)
Length = 119
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
R G +WFN +G+GF+ P DG D+FVH S + G R L + + V F ++ G +A
Sbjct: 54 RTGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQA 113
Query: 63 TRV 65
V
Sbjct: 114 RDV 116
>UniRef50_Q5YVF2 Cluster: Putative cold shock protein; n=1; Nocardia
farcinica|Rep: Putative cold shock protein - Nocardia
farcinica
Length = 122
Score = 49.6 bits (113), Expect = 3e-05
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKG 59
G R G WF+ KG+GFITPDD VFV ++ G+R+L V + +E+ G
Sbjct: 49 GPWRHGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAG 108
Query: 60 LEATRV 65
EA V
Sbjct: 109 PEAVAV 114
>UniRef50_Q2RZT3 Cluster: Conserved domain protein; n=2;
Salinibacter ruber DSM 13855|Rep: Conserved domain
protein - Salinibacter ruber (strain DSM 13855)
Length = 75
Score = 49.6 bits (113), Expect = 3e-05
Identities = 22/60 (36%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVH-QSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
+G+ K+F+ ++G+GFI P DG +DVF+H ++ M L + + +E+E ++++KGL A
Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62
>UniRef50_A5V9E9 Cluster: Putative cold-shock DNA-binding domain
protein; n=1; Sphingomonas wittichii RW1|Rep: Putative
cold-shock DNA-binding domain protein - Sphingomonas
wittichii RW1
Length = 198
Score = 49.6 bits (113), Expect = 3e-05
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWF+ +G+GFI D DV VH SVL+ G R+L + + E D+GL+A R
Sbjct: 36 GAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRGLQARR 95
Query: 65 VTGPNGTDCHGSDRRPLSK 83
+ + + G D ++K
Sbjct: 96 ILAIDLSTATGPDPDLIAK 114
Score = 40.3 bits (90), Expect = 0.018
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 9 KWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDE-EVEFECKESDKG 59
KWFN KG+GF+ D QD+F+H ++ G L E ++ E KG
Sbjct: 138 KWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKG 189
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase;
n=6; Alphaproteobacteria|Rep: Dead-box ATP-dependent
RNA helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 49.2 bits (112), Expect = 4e-05
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFR 42
G W+N KG GFI PD GG DVFVH S L+ G +
Sbjct: 4 GTVIWYNPVKGLGFINPDQGGDDVFVHMSALKASGLK 40
>UniRef50_A3Y9L0 Cluster: Cold-shock DNA-binding domain protein;
n=2; Marinomonas|Rep: Cold-shock DNA-binding domain
protein - Marinomonas sp. MED121
Length = 97
Score = 49.2 bits (112), Expect = 4e-05
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN KG+GFI +GG DVFVH + G R+L + ++V FE + KG +A
Sbjct: 35 GIVKWFNDEKGFGFI-EREGGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQAEN 93
Query: 65 VT 66
V+
Sbjct: 94 VS 95
>UniRef50_Q3W076 Cluster: Cold-shock DNA-binding domain; n=2;
Frankia|Rep: Cold-shock DNA-binding domain - Frankia
sp. EAN1pec
Length = 146
Score = 48.8 bits (111), Expect = 5e-05
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEAT 63
G+ F+ +G+GF+ P DGG+DVF+H + L + + +EFE +ESD+G +A+
Sbjct: 4 GKVLRFDHVRGYGFLAPSDGGEDVFLHANDLLVEKSLVVPGVVMEFEVEESDRGRKAS 61
>UniRef50_Q0APJ7 Cluster: Cold-shock DNA-binding domain protein;
n=1; Maricaulis maris MCS10|Rep: Cold-shock DNA-binding
domain protein - Maricaulis maris (strain MCS10)
Length = 174
Score = 48.8 bits (111), Expect = 5e-05
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 9 KWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATRV 65
KWF+ +G+GF+T D+ DVF+H + L+ GF + + +E C E KG A +
Sbjct: 111 KWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG-FRSLGDEEVEFECKESDKGLEATR 64
GR KW++ A+G+GFI DG D+ +H S L+ G +L + ++ + + DKG +A
Sbjct: 18 GRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKGRQAVE 77
Query: 65 VTGPNGTDCHGSDRRP 80
+ G D + ++ RP
Sbjct: 78 LVEMTGGD-NEAEARP 92
>UniRef50_Q2RNN9 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Cold-shock
DNA-binding domain protein - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 210
Score = 48.4 bits (110), Expect = 7e-05
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 9 KWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATRV 65
KWFN KG+GF+ DG D F+H SVLQ G+ L + + + KG++ + +
Sbjct: 10 KWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQKGMQVSEI 67
Score = 40.3 bits (90), Expect = 0.018
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG 59
G K+F+ KG+GF+ PD GG+DV+V LQ G L + V + KG
Sbjct: 147 GVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKG 201
>UniRef50_Q28PH1 Cluster: Cold-shock DNA-binding domain protein;
n=6; Rhodobacterales|Rep: Cold-shock DNA-binding domain
protein - Jannaschia sp. (strain CCS1)
Length = 181
Score = 48.4 bits (110), Expect = 7e-05
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWF+ KG+GF+ D+GG D+ +H +VL+ G S+ + V + + +GL+A
Sbjct: 24 GVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQAVE 83
Query: 65 V 65
+
Sbjct: 84 I 84
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 7 RCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATRV 65
R KWF+ AKG+GF +DVFVH VL+ GF L E V + + +G A V
Sbjct: 116 RVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEV 175
>UniRef50_A0YCJ0 Cluster: Cold-shock DNA-binding protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Cold-shock
DNA-binding protein - marine gamma proteobacterium
HTCC2143
Length = 144
Score = 48.4 bits (110), Expect = 7e-05
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFNV+KG+GF+T G+++FVH + G + L + +++EF + DKG +A
Sbjct: 79 GTVKWFNVSKGYGFVT-RASGEEIFVHFRSISGNGRKVLREGQKIEFSVVDGDKGPQAED 137
Query: 65 V 65
V
Sbjct: 138 V 138
>UniRef50_O46363 Cluster: Universal minicircle sequence binding
protein; n=4; Eukaryota|Rep: Universal minicircle
sequence binding protein - Crithidia fasciculata
Length = 116
Score = 48.4 bits (110), Expect = 7e-05
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKKKD 136
CYNCG+ H++ +C +PK C+NC S +HL +CP + + D
Sbjct: 29 CYNCGQ-TGHLSRECPSERKPKACYNCGSTEHLSRECPNEAKTGAD 73
Score = 47.6 bits (108), Expect = 1e-04
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
CYNCG+ + H++ C +PK C+NC S +HL +CP
Sbjct: 77 CYNCGQ-SGHLSRDCPSERKPKACYNCGSTEHLSRECP 113
Score = 41.9 bits (94), Expect = 0.006
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKK 134
+ CY CGE A H++ +C + C+NC HL +CP + + K
Sbjct: 5 VTCYKCGE-AGHMSRECPKAAASRTCYNCGQTGHLSRECPSERKPK 49
Score = 39.5 bits (88), Expect = 0.032
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 91 CYNCGEFANHIAAKC----SIGPQPKRCHNCKSEDHLVADCPIKVEKK 134
CYNCG H++ +C G + C+NC HL DCP + + K
Sbjct: 51 CYNCGS-TEHLSRECPNEAKTGADSRTCYNCGQSGHLSRDCPSERKPK 97
>UniRef50_A4QVX5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 487
Score = 48.4 bits (110), Expect = 7e-05
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
+ C CGE H C G Q + CHNC +EDH+ DC
Sbjct: 345 LECTKCGEIGKHWRKDCPQGAQSRACHNCGAEDHMSRDC 383
Score = 39.5 bits (88), Expect = 0.032
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
C+NCG +H++ C+ P+ +C NC DH+ DCP
Sbjct: 370 CHNCGA-EDHMSRDCT-EPRRMKCRNCDEFDHVAKDCP 405
Score = 37.1 bits (82), Expect = 0.17
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 72 DCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPK-----RCHNCKSEDHLVAD 126
+C D R+++C NC EF +H+A C P+P+ +C NC H +
Sbjct: 372 NCGAEDHMSRDCTEPRRMKCRNCDEF-DHVAKDC---PKPRDMSRVKCMNCSEMGHFKSK 427
Query: 127 CP 128
CP
Sbjct: 428 CP 429
Score = 36.3 bits (80), Expect = 0.30
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Query: 72 DCHGSDRR-----PLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPK-RCHNCKSEDHLVA 125
D G DRR P+ K + + I C+NCGE H C+ K C NC H
Sbjct: 276 DALGHDRRQCPEDPIEKQQ-QAITCFNCGE-TGHRVRDCTTPRVDKFACKNCNKSGHTAK 333
Query: 126 DCP 128
+CP
Sbjct: 334 ECP 336
>UniRef50_Q1VQ89 Cluster: Cold shock protein; n=8;
Bacteroidetes|Rep: Cold shock protein - Psychroflexus
torquis ATCC 700755
Length = 63
Score = 48.0 bits (109), Expect = 9e-05
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATR 64
+G K+FN KG+GFIT + +D FVH S L + R GD EVEF+ +E +KGL A
Sbjct: 3 KGTVKFFNDTKGFGFITEEGVDKDHFVHASGL-IDEIRE-GD-EVEFDLQEGNKGLNAVN 59
Query: 65 V 65
V
Sbjct: 60 V 60
>UniRef50_Q60AQ4 Cluster: Cold shock protein; n=27; Bacteria|Rep:
Cold shock protein - Methylococcus capsulatus
Length = 69
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLE 61
+++G KWFN +KG+GFI ++ G D+FVH +Q GF++L + + V F KG +
Sbjct: 4 QQQGTVKWFNESKGFGFIQREN-GSDLFVHFRSIQGQGFKTLKEGQRVSFTEVAGQKGPQ 62
Query: 62 ATRV 65
A V
Sbjct: 63 AENV 66
>UniRef50_Q1YTJ3 Cluster: Cold shock protein; n=1; gamma
proteobacterium HTCC2207|Rep: Cold shock protein -
gamma proteobacterium HTCC2207
Length = 89
Score = 47.6 bits (108), Expect = 1e-04
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLG-DEEVEFECKESDKGLEATR 64
GR KWF+ +G+GFI PD+G +++F H + M G+++L + V ++ + G A
Sbjct: 5 GRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAVN 64
Query: 65 V 65
+
Sbjct: 65 I 65
>UniRef50_Q0M3I1 Cluster: Cold-shock protein, DNA-binding; n=1;
Caulobacter sp. K31|Rep: Cold-shock protein, DNA-binding
- Caulobacter sp. K31
Length = 201
Score = 47.6 bits (108), Expect = 1e-04
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKG 59
G R + KWFN KG+GF+ D D+FVH L+ G L ++V E KG
Sbjct: 131 GPAERAKVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKG 190
Query: 60 LEATRVT 66
L +T
Sbjct: 191 LVVAEIT 197
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQ----DVFVHQSVLQMPG 40
V+ GR KWF+ KG+GFI PDD GQ DV +H + L+ G
Sbjct: 16 VRISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCG 58
>UniRef50_A6CF18 Cluster: Probable cold shock protein scoF; n=1;
Planctomyces maris DSM 8797|Rep: Probable cold shock
protein scoF - Planctomyces maris DSM 8797
Length = 65
Score = 47.6 bits (108), Expect = 1e-04
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 15 KGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATRVT 66
KG+GFI +DG QD+F H S L F L + + VEFE ++SD+GL A RVT
Sbjct: 12 KGFGFI--NDGQQDIFFHLSSLDGVTFDQLVEGQTVEFETEKSDRGLRAVRVT 62
>UniRef50_Q1AY27 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rubrobacter xylanophilus DSM 9941|Rep: Cold-shock
DNA-binding domain protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 69
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG 59
RGR KWF+ KG+GFI + G++V VH + ++ GFR+L + EVE+ +++ G
Sbjct: 3 RGRVKWFSGEKGFGFI-ETESGEEVLVHYTEIKGEGFRALEEGAEVEYAAVKTEDG 57
>UniRef50_A4FKV9 Cluster: Putative DNA-binding protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
DNA-binding protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 150
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 11 FNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATRV 65
F+ KG+GFI PD GG+DVF+H S+L L G VEFE ++G +A V
Sbjct: 9 FDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTKAMTV 64
>UniRef50_A2TNS0 Cluster: Cold shock protein; n=4;
Bacteroidetes|Rep: Cold shock protein - Dokdonia
donghaensis MED134
Length = 82
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLE 61
+++ G+ K+FN KG+GFI D+ ++VFVH + + G R +++V FE ++ +KG
Sbjct: 17 IRKEGKVKFFNTKKGFGFIAIDNSDEEVFVHTT--NVTG-RLRENDKVTFEVEDGEKGPS 73
Query: 62 ATRV 65
A V
Sbjct: 74 AVNV 77
>UniRef50_Q9HSS3 Cluster: Cold shock protein; n=7;
Halobacteriaceae|Rep: Cold shock protein -
Halobacterium salinarium (Halobacterium halobium)
Length = 74
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATRV 65
G +FN G+GFI +D +DVF H + P +EVEF+ +++DKG AT +
Sbjct: 14 GEVDFFNDTGGYGFIETEDADEDVFFHMEDVGGPDLEE--GQEVEFDIEQADKGPRATNL 71
Query: 66 T 66
T
Sbjct: 72 T 72
>UniRef50_Q56922 Cluster: Major cold shock protein; n=31;
Enterobacteriaceae|Rep: Major cold shock protein -
Yersinia enterocolitica
Length = 46
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 15 KGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDK 58
KG+GFITP DG +DVFVH S +Q F++L + ++VEF + K
Sbjct: 2 KGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46
>UniRef50_Q6FAY9 Cluster: Cold shock-like protein; n=44;
Bacteria|Rep: Cold shock-like protein - Acinetobacter
sp. (strain ADP1)
Length = 69
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN KG+GFI D G DVF H + GF++L + + V F + KG A
Sbjct: 7 GTVKWFNEVKGFGFI-QQDSGPDVFAHFKEIASSGFKTLYEGQRVSFGIVDGQKGPSAVN 65
Query: 65 V 65
+
Sbjct: 66 I 66
>UniRef50_Q2RWM8 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Cold-shock
DNA-binding domain protein - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 68
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD 46
G WF+ G+GFI PDDGG D+ V L G RSL D
Sbjct: 4 GTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRD 44
>UniRef50_A4U251 Cluster: Cold shock DNA-binding domain protein;
n=3; Magnetospirillum|Rep: Cold shock DNA-binding
domain protein - Magnetospirillum gryphiswaldense
Length = 209
Score = 46.8 bits (106), Expect = 2e-04
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 9 KWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD 46
KWFN +KG+GF+ P DG D F+H S L+ G + +
Sbjct: 57 KWFNASKGFGFVAPSDGTPDAFLHISALERAGLTQVAE 94
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATR 64
G K+F+ KG+GF+ D GG+DVFVH L+ G ++L + V + KG +A
Sbjct: 146 GVVKFFSAEKGFGFVQTDQGGKDVFVHIKALERSGIKALETGQRVRCTTTQGQKGPQADT 205
Query: 65 V 65
V
Sbjct: 206 V 206
>UniRef50_A0PKE1 Cluster: DNA-binding protein; n=1; Mycobacterium
ulcerans Agy99|Rep: DNA-binding protein - Mycobacterium
ulcerans (strain Agy99)
Length = 135
Score = 46.8 bits (106), Expect = 2e-04
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATRV 65
GR F+ +G+GFI PD GG+DVF+H + L + V F+ ++ +G AT V
Sbjct: 5 GRIVRFDDVRGYGFIAPDSGGEDVFLHANDLDFDRLLAKRGTRVSFDIEDGPRGKFATAV 64
>UniRef50_Q339V4 Cluster: Retrotransposon protein, putative,
unclassified; n=5; Oryza sativa|Rep: Retrotransposon
protein, putative, unclassified - Oryza sativa subsp.
japonica (Rice)
Length = 1265
Score = 46.8 bits (106), Expect = 2e-04
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
I+CYNCGEF +H+ +C+ +P C+ CKS H+ + CP
Sbjct: 244 IKCYNCGEFGHHL-VRCT---KPSLCYVCKSSGHISSHCP 279
>UniRef50_Q4Q1R3 Cluster: Universal minicircle sequence binding
protein; n=6; Leishmania|Rep: Universal minicircle
sequence binding protein - Leishmania major
Length = 175
Score = 46.8 bits (106), Expect = 2e-04
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
CYNCGE H++ C +PK C+NC S DHL +C
Sbjct: 88 CYNCGE-TGHMSRDCPSERKPKSCYNCGSTDHLSREC 123
Score = 46.8 bits (106), Expect = 2e-04
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
CYNCG H++ C +PK C+NC S DHL +CP
Sbjct: 136 CYNCGG-TGHLSRDCPNERKPKSCYNCGSTDHLSRECP 172
Score = 42.3 bits (95), Expect = 0.005
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKK 134
+ CY CGE A H++ C + C+NC H+ DCP + + K
Sbjct: 64 VTCYKCGE-AGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPK 108
Score = 41.5 bits (93), Expect = 0.008
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 14/67 (20%)
Query: 66 TGPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCS----IGPQPKRCHNCKSED 121
TG DC S+R+P S CYNCG +H++ +C+ G + C+NC
Sbjct: 94 TGHMSRDCP-SERKPKS--------CYNCGS-TDHLSRECTNEAKAGADTRSCYNCGGTG 143
Query: 122 HLVADCP 128
HL DCP
Sbjct: 144 HLSRDCP 150
>UniRef50_Q48493 Cluster: Major cold shock protein; n=50;
Bacteria|Rep: Major cold shock protein - Klebsiella
pneumoniae
Length = 46
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 14 AKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDK 58
+KG+GFI+P DG +DVFVH S +Q F++L + +EV F + K
Sbjct: 1 SKGFGFISPKDGSKDVFVHFSAIQSDSFKTLNEGQEVSFTIENGAK 46
>UniRef50_Q5NP11 Cluster: Cold shock protein; n=1; Zymomonas
mobilis|Rep: Cold shock protein - Zymomonas mobilis
Length = 174
Score = 46.4 bits (105), Expect = 3e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 9 KWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFEC-KESDKGLEA 62
KWFN KG+GF+ + QD+FVH G + + + C ++SDKGL A
Sbjct: 110 KWFNRTKGYGFLIRNADQQDIFVHAEAFHAAGIKKFEAGKSLYACLRQSDKGLSA 164
Score = 41.1 bits (92), Expect = 0.010
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEE-VEFECKESDKGLEATR 64
G KWF++ KG+GF+ G D+ +H S+LQ G R L + V+ + S +G +A +
Sbjct: 15 GYVKWFDIIKGFGFLIGSKGEGDILIHFSLLQEYGKRFLPEGSWVKCLARRSRQGWKAHK 74
Query: 65 V 65
+
Sbjct: 75 I 75
>UniRef50_A0Z255 Cluster: Cold shock protein, CspA family-like
protein; n=1; marine gamma proteobacterium HTCC2080|Rep:
Cold shock protein, CspA family-like protein - marine
gamma proteobacterium HTCC2080
Length = 138
Score = 46.4 bits (105), Expect = 3e-04
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEATR 64
G KWFN KG+GFI DDG +VFVH ++ RS+ + V + + SD+G +A
Sbjct: 76 GNIKWFNATKGFGFIVGDDGA-EVFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAEG 134
Query: 65 V 65
V
Sbjct: 135 V 135
>UniRef50_A2U2L8 Cluster: Cold shock protein; n=3;
Bacteroidetes|Rep: Cold shock protein - Polaribacter
dokdonensis MED152
Length = 76
Score = 46.0 bits (104), Expect = 4e-04
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLE 61
+ +G K+FN +KG+GFIT + ++ FVH S L + R ++EVEF+ ++ KGL
Sbjct: 13 IMNKGTVKFFNESKGFGFITEEGTNKEHFVHVSGL-VDEIRE--NDEVEFDLQDGRKGLN 69
Query: 62 ATRV 65
A V
Sbjct: 70 AVNV 73
>UniRef50_UPI0000DC0B3F Cluster: UPI0000DC0B3F related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B3F UniRef100 entry -
Rattus norvegicus
Length = 292
Score = 45.6 bits (103), Expect = 5e-04
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG----FRSLGD-EEVEFECKESDKGL 60
G K V G G I +D +DVFVHQ+ ++ RS+GD E VEF+ E +K +
Sbjct: 33 GTMKCSIVWNGCGLINRNDTKEDVFVHQTAMKKNDPRKYLRSVGDAETVEFDFVEGEKDV 92
Query: 61 EATRVTGPNGTDCHGS 76
EA VTG G S
Sbjct: 93 EAASVTGLGGVPVQDS 108
>UniRef50_Q9ZHW6 Cluster: Major cold shock protein; n=8;
Bacteria|Rep: Major cold shock protein - Enterococcus
faecalis (Streptococcus faecalis)
Length = 50
Score = 45.6 bits (103), Expect = 5e-04
Identities = 22/49 (44%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 15 KGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
KG+GFI+P+DG DVFVH S +Q GF++L + + V F+ ++ +G +A
Sbjct: 1 KGFGFISPEDGN-DVFVHFSAIQGDGFKTLEEGQAVTFDVEDGHRGPQA 48
>UniRef50_A4A3Y7 Cluster: Cold-shock domain family protein; n=1;
Congregibacter litoralis KT71|Rep: Cold-shock domain
family protein - Congregibacter litoralis KT71
Length = 189
Score = 45.6 bits (103), Expect = 5e-04
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG 59
G G KWFN KG+GFI ++ G ++FVH + G RSL D V + +DKG
Sbjct: 121 GDAEEGTVKWFNGTKGFGFIIREN-GDEIFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKG 179
Query: 60 LEATRV 65
+A V
Sbjct: 180 PQAEEV 185
>UniRef50_Q4WQJ7 Cluster: Zinc knuckle transcription factor (CnjB),
putative; n=6; Trichocomaceae|Rep: Zinc knuckle
transcription factor (CnjB), putative - Aspergillus
fumigatus (Sartorya fumigata)
Length = 509
Score = 45.6 bits (103), Expect = 5e-04
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
+ C C E H A C P P+ C NC SEDH+ DC
Sbjct: 352 VECKRCNEMG-HFAKDCHQAPAPRTCRNCGSEDHMARDC 389
Score = 33.5 bits (73), Expect = 2.1
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 75 GSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
G + +K R K C C + H AA+C P P C NC+SE H +C
Sbjct: 102 GRSKAECTKPRVFKGPCRICSK-EGHPAAECPDRP-PDVCKNCQSEGHKTIEC 152
Score = 31.5 bits (68), Expect = 8.4
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 91 CYNCGEFANHIAAKCSIGPQPK--RCHNCKSEDHLVADCPIKVEKKK 135
C NCG +H+A C C NC+ H DCP K + K
Sbjct: 376 CRNCGS-EDHMARDCDKPRDASIVTCRNCEEVGHFSRDCPQKKDWSK 421
>UniRef50_A7EHR9 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Sclerotinia sclerotiorum 1980
Length = 210
Score = 45.6 bits (103), Expect = 5e-04
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 90 RCYNCGEFANHIAAKCSIGP-QPKRCHNCKSEDHLVADCPIK 130
+CYNCGE H++ CS + +RC+ CK E H DCP++
Sbjct: 163 KCYNCGE-VGHLSRDCSQETSEARRCYECKQEGHEKLDCPLR 203
Score = 39.9 bits (89), Expect = 0.024
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
+CYNC H++ C GP+ K C+ C + H+ DC
Sbjct: 36 KCYNCDN-PGHLSRDCPEGPKEKVCYRCGTSGHISKDC 72
Score = 36.3 bits (80), Expect = 0.30
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
C+ CG H A +C P +C+NC + HL DCP
Sbjct: 16 CFTCGN-EGHQARECP-SRGPAKCYNCDNPGHLSRDCP 51
Score = 33.5 bits (73), Expect = 2.1
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
C++CG + H++ C+ G ++C+NC HL DC
Sbjct: 145 CFSCGGYG-HLSRDCTQG---QKCYNCGEVGHLSRDC 177
>UniRef50_Q6ALH9 Cluster: Hypothetical cold-shock protein; n=1;
Desulfotalea psychrophila|Rep: Hypothetical cold-shock
protein - Desulfotalea psychrophila
Length = 204
Score = 45.2 bits (102), Expect = 6e-04
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKG 59
G K +N KG+GFITPD+GG DVF+H + R + + + DKG
Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHRPEIGQVISYGTTSGDKG 57
>UniRef50_Q5H9Y7 Cluster: P0650D04.15 protein; n=9; Oryza
sativa|Rep: P0650D04.15 protein - Oryza sativa (Rice)
Length = 1579
Score = 45.2 bits (102), Expect = 6e-04
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 85 RFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEK 133
R KI+C+ CG +H AA+ P P C++C S H+ + CP+ + K
Sbjct: 245 RAPKIKCFKCGREGHHQAAR----PNPSLCYSCHSSGHISSQCPLMMRK 289
>UniRef50_UPI000050F90E Cluster: COG1278: Cold shock proteins;
n=1; Brevibacterium linens BL2|Rep: COG1278: Cold shock
proteins - Brevibacterium linens BL2
Length = 126
Score = 44.8 bits (101), Expect = 8e-04
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKG---LEA 62
GR KWF+V KG+GF+ +DG Q F+H SVL + G ++++ +S +G L+A
Sbjct: 4 GRVKWFDVDKGFGFVIAEDGSQ-AFLHSSVLPEDAEVTKG-TRLDYDVVDSRRGAQVLKA 61
Query: 63 TRVTGP 68
++GP
Sbjct: 62 RLLSGP 67
>UniRef50_Q5P4M3 Cluster: Probable cold shock family protein; n=1;
Azoarcus sp. EbN1|Rep: Probable cold shock family
protein - Azoarcus sp. (strain EbN1) (Aromatoleum
aromaticum (strain EbN1))
Length = 189
Score = 44.8 bits (101), Expect = 8e-04
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 9 KWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECK-ESDKGLEATRVTG 67
KW N +G+GFI P DGG +VFVH S G R E + FE + + D+ A V+
Sbjct: 9 KW-NDDRGFGFIVPKDGGPEVFVHVSAFPRDGRRPQIGEPLSFEIELDKDRKKRAVGVSR 67
Query: 68 PNGTDCHGSDRRPLSKIRFRK 88
P R L + R ++
Sbjct: 68 PGRPKLAPVRRHALDRKRAKR 88
>UniRef50_Q1ZUW9 Cluster: Predicted membrane protein; n=3;
Vibrionaceae|Rep: Predicted membrane protein - Vibrio
angustum S14
Length = 204
Score = 44.8 bits (101), Expect = 8e-04
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKG-LEA 62
++G+ +N KG+GFI PD+G QDVF H S L R +E + F + KG + A
Sbjct: 3 QQGKIISWNQQKGFGFIAPDNGEQDVFFHVSALPDKQCRPRINEAITFCIGKDKKGRMSA 62
Query: 63 TRVT 66
T VT
Sbjct: 63 TTVT 66
>UniRef50_A3YF52 Cluster: Cold-shock protein, DNA-binding; n=2;
Marinomonas|Rep: Cold-shock protein, DNA-binding -
Marinomonas sp. MED121
Length = 79
Score = 44.8 bits (101), Expect = 8e-04
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLE 61
K +G KWFN +KG GFI D+ DVFVH + G ++L + V F E+D G +
Sbjct: 4 KLKGTVKWFNDSKGVGFIQRDNEA-DVFVHYKSIVSEGHKTLKKGQAVSFFITENDFGRQ 62
Query: 62 ATRV 65
A+ V
Sbjct: 63 ASEV 66
>UniRef50_Q7ZJ30 Cluster: Gag polyprotein; n=1; Simian
immunodeficiency virus - mon|Rep: Gag polyprotein -
Simian immunodeficiency virus - mon
Length = 192
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 88 KIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
+IRCYNCG+F H+A C+ P+ C C E H +CP
Sbjct: 67 QIRCYNCGKF-GHVAKNCT-APRKTGCFRCGKEGHXSKNCP 105
>UniRef50_Q5L9T7 Cluster: Cold shock-like protein; n=2;
Bacteroides fragilis|Rep: Cold shock-like protein -
Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
Length = 69
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATRV 65
GR ++FN AKG+GF+ D G+ F H + P + GD V FE + +G+ A R+
Sbjct: 8 GRIEYFNAAKGYGFVKDADNGEKYFFH--ISSAPATIAEGD-RVTFEIERGMRGMNAVRI 64
Query: 66 T 66
+
Sbjct: 65 S 65
>UniRef50_Q9ZAH1 Cluster: Cold shock protein C; n=10;
Streptococcaceae|Rep: Cold shock protein C -
Lactococcus lactis
Length = 66
Score = 44.4 bits (100), Expect = 0.001
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEAT 63
+G+ WFN KG+GFI DD QDVF + +Q F+ + ++V F+ K + +G A+
Sbjct: 3 KGKINWFNADKGYGFIMADD-MQDVFAYLLSIQGNDFKKYDEGQKVTFDIKMTSRGRYAS 61
Query: 64 RV 65
V
Sbjct: 62 NV 63
>UniRef50_Q1QLF4 Cluster: Cold-shock DNA-binding domain protein;
n=1; Nitrobacter hamburgensis X14|Rep: Cold-shock
DNA-binding domain protein - Nitrobacter hamburgensis
(strain X14 / DSM 10229)
Length = 68
Score = 44.4 bits (100), Expect = 0.001
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFEC-KESDKGLEATR 64
G K+FN KG+GFI PDDG D+F+H L + VE+E K D L A R
Sbjct: 4 GSVKFFNAEKGYGFIQPDDGTPDIFLHVHGLADKLRYPCPRDRVEYEVGKGPDGRLRAER 63
Query: 65 V 65
V
Sbjct: 64 V 64
>UniRef50_Q1FKR2 Cluster: Cold-shock protein, DNA-binding; n=2;
Clostridium|Rep: Cold-shock protein, DNA-binding -
Clostridium phytofermentans ISDg
Length = 70
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGF-RSLGD-EEVEFECKESDKGLEAT 63
G KW++ +G+GF++ +D G+DVF+H S ++ GF + + + E + F+ E +KG A
Sbjct: 6 GTVKWYDSERGYGFVSTND-GRDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEKGPAAI 64
Query: 64 RV 65
V
Sbjct: 65 NV 66
>UniRef50_UPI0000E45D4B Cluster: PREDICTED: similar to alpha
tectorin; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to alpha tectorin -
Strongylocentrotus purpuratus
Length = 814
Score = 44.0 bits (99), Expect = 0.001
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 87 RKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPI 129
RK+ CYNCGE +H CS +RC +CK HL DCP+
Sbjct: 371 RKLICYNCGEKGHH-RNDCS---SSRRCFSCKMPGHLKKDCPL 409
>UniRef50_Q1GT29 Cluster: Cold-shock DNA-binding domain protein;
n=1; Sphingopyxis alaskensis|Rep: Cold-shock
DNA-binding domain protein - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 90
Score = 44.0 bits (99), Expect = 0.001
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEE-VEFECKESDKG 59
G K+FN KG+GFI +DG D FVH + +Q G +L E+ V +E + G
Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNG 80
>UniRef50_A3S070 Cluster: Cold shock protein; n=1; Ralstonia
solanacearum UW551|Rep: Cold shock protein - Ralstonia
solanacearum UW551
Length = 82
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVF 30
G KWFN KG+GFITPD GG D+F
Sbjct: 46 GTVKWFNETKGFGFITPDGGGADLF 70
>UniRef50_A5C6R1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 958
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 7/50 (14%)
Query: 87 RKIRCYNCGEFANHIAAKCSIGPQPKR-CHNCKSEDHLVADCPIKVEKKK 135
R ++C++C +F +HIA C PK+ C+ CK + H+++ CPI+ E+K+
Sbjct: 206 RVVQCFSCKDF-DHIARDC-----PKKFCNYCKKQGHIISVCPIRPERKQ 249
>UniRef50_Q4Q8I6 Cluster: RNA binding protein rbp16, putative;
n=5; Trypanosomatidae|Rep: RNA binding protein rbp16,
putative - Leishmania major
Length = 142
Score = 44.0 bits (99), Expect = 0.001
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 10 WFNVAKGWGFITPDDGGQDVFVHQSVLQMP--GFRSLG-DEEVEFECKESDKGLEATRVT 66
W + +G+GFI + + FVH S LQ G+R+L D+EVEFE D A VT
Sbjct: 25 WMS-GRGFGFIEDNADKKQHFVHFSALQTETGGYRALAVDQEVEFEVASQDGRTRAENVT 83
Query: 67 GPNGTDCHGSDRRP 80
P G R P
Sbjct: 84 APGGGKLPSGPRPP 97
>UniRef50_UPI00006A28C0 Cluster: Y-box-binding protein 2 (Germ
cell-specific Y-box-binding protein) (Contrin) (MSY2
homolog).; n=1; Xenopus tropicalis|Rep: Y-box-binding
protein 2 (Germ cell-specific Y-box-binding protein)
(Contrin) (MSY2 homolog). - Xenopus tropicalis
Length = 199
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 42 RSLGD-EEVEFECKESDKGLEATRVTGPNGTDCHGSDRRPLSKIRFRK 88
RS+GD E VEF+ E +KG EA VTGP G GS P ++ RFR+
Sbjct: 82 RSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRFAP-NRRRFRR 128
>UniRef50_Q52KT6 Cluster: MGC115344 protein; n=2; Xenopus|Rep:
MGC115344 protein - Xenopus laevis (African clawed
frog)
Length = 221
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQ 33
K +G KWFNV G+GFI +D +DVFVHQ
Sbjct: 35 KVQGTVKWFNVRNGYGFINRNDTKEDVFVHQ 65
>UniRef50_A3UBK6 Cluster: Cold-shock DNA-binding domain protein;
n=8; Bacteroidetes|Rep: Cold-shock DNA-binding domain
protein - Croceibacter atlanticus HTCC2559
Length = 64
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATRV 65
G K+FN KG+GFI + ++ FVH + L + R D+ VEFE K+ +KG+ A V
Sbjct: 4 GTVKFFNDTKGFGFIKEEGTNEEHFVHVTGL-IDEIRE--DDRVEFELKQGNKGMNAVNV 60
>UniRef50_A1ZFN2 Cluster: Conserved domain protein; n=2;
Flexibacteraceae|Rep: Conserved domain protein -
Microscilla marina ATCC 23134
Length = 64
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATR 64
+G K+F KG+GFIT D G+D+F H S Q F ++ V +E KG++AT
Sbjct: 3 KGVVKFFKEDKGYGFITNSDTGEDIFFHVSDTQDQLFE---NDNVTYEETRGKKGMQATD 59
Query: 65 V 65
V
Sbjct: 60 V 60
>UniRef50_A5C9H3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 749
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 7/48 (14%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKR-CHNCKSEDHLVADCPIKVEKKK 135
I+C++C +F HIA C PK+ C+ CK + H+++ CPI+ E+K+
Sbjct: 29 IQCFSCKDFG-HIARDC-----PKKFCNYCKKQGHIISTCPIRPERKQ 70
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 43.6 bits (98), Expect = 0.002
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
C NCGE +H +C P P +C NC++E H + DCP
Sbjct: 51 CRNCGELGHH-RDEC---PAPPKCGNCRAEGHFIEDCP 84
Score = 37.5 bits (83), Expect = 0.13
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
+ C NCG+ H+++ C+ +P +C C E H DCP
Sbjct: 87 LTCRNCGQ-EGHMSSACT---EPAKCRECNEEGHQAKDCP 122
Score = 33.9 bits (74), Expect = 1.6
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIK 130
C CGE HI C + C+ C+ HL +CP K
Sbjct: 11 CRKCGE-TGHIGRDCPTVGDDRACNFCQETGHLAKECPKK 49
>UniRef50_Q9Y534 Cluster: Cold shock domain-containing protein C2;
n=33; Euteleostomi|Rep: Cold shock domain-containing
protein C2 - Homo sapiens (Human)
Length = 153
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDE 47
+G CK F+ ++G GFITP++G +D+FVH S ++ GDE
Sbjct: 70 KGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDE 112
>UniRef50_Q9Y2V2 Cluster: Calcium-regulated heat stable protein 1;
n=14; Euteleostomi|Rep: Calcium-regulated heat stable
protein 1 - Homo sapiens (Human)
Length = 147
Score = 43.6 bits (98), Expect = 0.002
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKG--LEA 62
+G CK F +KG GFITP DGG D+F+H S ++ GDE C K L+A
Sbjct: 64 KGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEKLQA 123
Query: 63 TRV 65
V
Sbjct: 124 VEV 126
>UniRef50_Q9RBP7 Cluster: Cold shock protein 7.4; n=2;
Rhodococcus|Rep: Cold shock protein 7.4 - Rhodococcus
sp. 7/1
Length = 57
Score = 43.2 bits (97), Expect = 0.003
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 9 KWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL 44
+W+N KG+G +TPDDG +D FVH + L+ + S+
Sbjct: 3 RWYNAEKGFGCLTPDDGSKDCFVHFTALRSERWLSI 38
>UniRef50_A2UVR3 Cluster: Cold-shock DNA-binding domain protein;
n=1; Shewanella putrefaciens 200|Rep: Cold-shock
DNA-binding domain protein - Shewanella putrefaciens
200
Length = 149
Score = 43.2 bits (97), Expect = 0.003
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATR 64
+G KWF+V +G+GFIT G D + H S + +GD +V FE + KGL R
Sbjct: 4 QGVVKWFSVPQGFGFITSITEGTDHYFHVSDVIGSALPEIGD-KVTFETISTPKGLRGKR 62
Query: 65 V 65
V
Sbjct: 63 V 63
>UniRef50_P36627 Cluster: Cellular nucleic acid-binding protein
homolog; n=1; Schizosaccharomyces pombe|Rep: Cellular
nucleic acid-binding protein homolog -
Schizosaccharomyces pombe (Fission yeast)
Length = 179
Score = 43.2 bits (97), Expect = 0.003
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
CYNC + H A++C+ Q K C+ C + HLV DCP
Sbjct: 38 CYNCNQ-TGHKASECTEPQQEKTCYACGTAGHLVRDCP 74
Score = 36.7 bits (81), Expect = 0.22
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKK 134
RCYNCGE H A +C+ G C+NC H ++C ++K
Sbjct: 18 RCYNCGE-NGHQARECTKG---SICYNCNQTGHKASECTEPQQEK 58
>UniRef50_Q51929 Cluster: Major cold shock protein; n=74;
Bacteria|Rep: Major cold shock protein - Photobacterium
mondopomensis
Length = 46
Score = 42.7 bits (96), Expect = 0.003
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 15 KGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDK 58
KG+GF+T ++GG DVFVH + GF++L + ++V F+ ++ K
Sbjct: 2 KGFGFLTQNNGGADVFVHFRAIASEGFKTLTEGQKVSFDVEQGQK 46
>UniRef50_UPI0000DC181B Cluster: UPI0000DC181B related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC181B UniRef100 entry -
Rattus norvegicus
Length = 210
Score = 42.3 bits (95), Expect = 0.005
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 17 WGFITPDDGGQDVFVHQSVLQMPGFR----SLGDEE-VEFECKESDKGLEATRVTGPNG 70
+G++ + G DVFVHQ+ ++ R + GD E VEF+ E +K EA + GP G
Sbjct: 42 YGYVGKNSSGNDVFVHQTAIKKNNPRKYLHTTGDRETVEFDVIEGEKDAEAANIIGPGG 100
>UniRef50_Q82WG3 Cluster: Cold-shock DNA-binding domain; n=5;
Bacteria|Rep: Cold-shock DNA-binding domain -
Nitrosomonas europaea
Length = 204
Score = 42.3 bits (95), Expect = 0.005
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKG 59
++ +GR + KG+GF+TP+ GG+ +FVH + R G+E V +E KG
Sbjct: 1 MRYQGRITTWKDDKGFGFVTPNGGGEQIFVHINSFSSRQRRPEGNELVTYELTVDSKG 58
>UniRef50_A7BYF1 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein
- Beggiatoa sp. PS
Length = 189
Score = 42.3 bits (95), Expect = 0.005
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 11 FNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATRV 65
F+ +G+GFI D +DVFVH ++ S G ++VEF+ +++DKGL A V
Sbjct: 8 FDKKRGFGFIRSDKFSEDVFVHLKNIREQQSLSPG-QKVEFDTEQTDKGLSAINV 61
>UniRef50_Q012M7 Cluster: E3 ubiquitin ligase interacting with
arginine methyltransferase; n=2; Ostreococcus|Rep: E3
ubiquitin ligase interacting with arginine
methyltransferase - Ostreococcus tauri
Length = 276
Score = 42.3 bits (95), Expect = 0.005
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
+RC+ CG+ H A+C + + K CH C + H+ DCP
Sbjct: 56 LRCFRCGQ-GGHREAECELPAKKKPCHLCGYKSHVARDCP 94
Score = 33.9 bits (74), Expect = 1.6
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 75 GSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
G R ++ +K C+ CG + +H+A C G C+NC + H DCP
Sbjct: 64 GGHREAECELPAKKKPCHLCG-YKSHVARDCPHG----LCYNCLTPGHQSRDCP 112
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 42.3 bits (95), Expect = 0.005
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 12/53 (22%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKR-------CHNCKSEDHLVADCP-IKVEKKK 135
CYNCG+ + H++ +C P PK+ C+NC+ E H+ DCP KVE+ +
Sbjct: 230 CYNCGD-SGHMSREC---PNPKKESSSRGTCYNCQQEGHMSKDCPNPKVERSR 278
Score = 34.7 bits (76), Expect = 0.90
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 91 CYNCGEFANHIAAKC-----SIGPQPKRCHNCKSEDHLVADCP 128
C+NCGE H + C S G C C+S DH+ DCP
Sbjct: 312 CFNCGE-EGHQSKDCEKPRTSKGGGGGACFRCQSTDHMAKDCP 353
Score = 33.9 bits (74), Expect = 1.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKR---CHNCKSEDHLVADCPIK 130
CYNC + H++ C P+ +R C NC + H+ +CP K
Sbjct: 256 CYNCQQ-EGHMSKDCP-NPKVERSRGCRNCGEDGHMARECPSK 296
>UniRef50_A2QPQ6 Cluster: Function: byr3 of S. pombe acts in the
sexual differentiation pathway; n=3;
Eurotiomycetidae|Rep: Function: byr3 of S. pombe acts in
the sexual differentiation pathway - Aspergillus niger
Length = 171
Score = 42.3 bits (95), Expect = 0.005
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKR-CHNCKSEDHLVADCP 128
+CYNCGE H++ C + +R C+NCK H+ A CP
Sbjct: 132 KCYNCGE-VGHVSRDCPTEAKGERVCYNCKQPGHVQAACP 170
Score = 41.1 bits (92), Expect = 0.010
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
CYNCG H++ +C++ P+ K C+ C H+ +C
Sbjct: 31 CYNCGG-QGHVSRECTVAPKEKSCYRCGGVGHISREC 66
Score = 40.3 bits (90), Expect = 0.018
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 87 RKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKKK 135
R+ CY+CG F H+A C+ G ++C+NC H+ DCP + + ++
Sbjct: 110 RQQTCYSCGGFG-HMARDCTNG---QKCYNCGEVGHVSRDCPTEAKGER 154
Score = 35.9 bits (79), Expect = 0.39
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKK 134
C+NCG+ A+H A C P C+NC + H+ +C + ++K
Sbjct: 10 CFNCGD-ASHQARDCPKKGTPT-CYNCGGQGHVSRECTVAPKEK 51
>UniRef50_Q4FUZ6 Cluster: Possible guanine-specific ribonuclease
with a cold-shock DNA-binding domain; n=2;
Psychrobacter|Rep: Possible guanine-specific
ribonuclease with a cold-shock DNA-binding domain -
Psychrobacter arcticum
Length = 247
Score = 41.9 bits (94), Expect = 0.006
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKG-LEATR 64
G+ K +N KG+GFI D+ +DVF H +QM S G + V F + +DK L AT
Sbjct: 4 GKIKHWNSDKGYGFIDVDNQSEDVFFHIKSVQMAQPISEG-QRVYFNSERNDKNQLRATE 62
Query: 65 VT 66
VT
Sbjct: 63 VT 64
>UniRef50_Q1B3F5 Cluster: Cold-shock DNA-binding domain protein;
n=13; Actinomycetales|Rep: Cold-shock DNA-binding
domain protein - Mycobacterium sp. (strain MCS)
Length = 147
Score = 41.9 bits (94), Expect = 0.006
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEATR 64
GR KW++ KG+GF++ +D G+DV+V S L G L + VEF +G +A
Sbjct: 15 GRVKWYDAEKGFGFLSQED-GEDVYVRSSALP-AGVEGLKAGQRVEFGVAAGRRGPQALS 72
Query: 65 VT 66
+T
Sbjct: 73 LT 74
>UniRef50_A1U4X1 Cluster: Putative uncharacterized protein; n=1;
Marinobacter aquaeolei VT8|Rep: Putative
uncharacterized protein - Marinobacter aquaeolei
(strain ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 214
Score = 41.9 bits (94), Expect = 0.006
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLE 61
+ ++G +N AKG+GFITP++GG+ +F H S Q G S + V + K+ L
Sbjct: 1 MNQKGLLTSWNDAKGFGFITPENGGERLFAHISAYQGRGRPSASRKVVYAQTKDEKGRLR 60
Query: 62 AT 63
A+
Sbjct: 61 AS 62
>UniRef50_A4VQF2 Cluster: Cold-shock DNA-binding domain protein;
n=10; Pseudomonas|Rep: Cold-shock DNA-binding domain
protein - Pseudomonas stutzeri (strain A1501)
Length = 235
Score = 41.5 bits (93), Expect = 0.008
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVL 36
++RRG K +N KG+GFI P+ GG+++FVH S +
Sbjct: 1 MERRGTLKSWNDDKGFGFIRPEQGGEELFVHISAV 35
>UniRef50_Q75GM6 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=8; Oryza sativa|Rep: Putative non-LTR
retroelement reverse transcriptase - Oryza sativa subsp.
japonica (Rice)
Length = 1614
Score = 41.5 bits (93), Expect = 0.008
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 88 KIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKK 134
KI+C+ CG +H A C P P C++C + H+ A CP+ + K+
Sbjct: 155 KIKCFKCGREGHH-QATC---PNPPLCYSCHNTGHISAHCPMNLMKR 197
>UniRef50_A5B7U3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1162
Score = 41.5 bits (93), Expect = 0.008
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Query: 88 KIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKKK 135
+I+CY+C EF HIA C+ +P C+ C+ H++ +CPI+ + ++
Sbjct: 204 QIQCYSCKEFG-HIATSCT---KPY-CNYCRKRGHIIKECPIRPQNRQ 246
>UniRef50_A2Y5S6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 1025
Score = 41.5 bits (93), Expect = 0.008
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 88 KIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKK 134
KI+C+ CG +H A C P P C++C + H+ A CP+ + K+
Sbjct: 216 KIKCFKCGREGHH-QATC---PNPPLCYSCHNTGHISAHCPMNLMKR 258
>UniRef50_A2I3Y2 Cluster: Zinc finger protein-like protein; n=1;
Maconellicoccus hirsutus|Rep: Zinc finger protein-like
protein - Maconellicoccus hirsutus (hibiscus mealybug)
Length = 142
Score = 41.5 bits (93), Expect = 0.008
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
RCY C E HIA C +C++CK H+ DCP
Sbjct: 53 RCYRCNEIG-HIARDCVRSDSSPQCYSCKGIGHIARDCP 90
Score = 40.3 bits (90), Expect = 0.018
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 52 ECKESDKGLE--ATRVTGPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGP 109
+C SD + + + G DC S + R CYNC + A H+A C
Sbjct: 66 DCVRSDSSPQCYSCKGIGHIARDCPDSSS---NNSRHFSANCYNCNK-AGHMARDCPNSG 121
Query: 110 QPKRCHNCKSEDHLVADCP 128
K C+ C+ + H+ DCP
Sbjct: 122 GGKTCYVCRKQGHISRDCP 140
>UniRef50_Q8PK43 Cluster: Integral membrane protein; n=5;
Proteobacteria|Rep: Integral membrane protein -
Xanthomonas axonopodis pv. citri
Length = 206
Score = 41.1 bits (92), Expect = 0.010
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFEC-KESDKGL 60
++ +GR +N KG+GF+TP GG FVH S R E + + +++ K L
Sbjct: 3 MRYQGRLSDWNDHKGFGFVTPHGGGDRAFVHISAFAQQTRRPRDGEIITYAIERDAHKRL 62
Query: 61 EATRVTGPNGTDCHGSDRR 79
AT+V + T +++R
Sbjct: 63 NATQVRWADRTTAARTEQR 81
>UniRef50_Q3Y013 Cluster: Cold-shock protein, DNA-binding; n=6;
cellular organisms|Rep: Cold-shock protein, DNA-binding
- Enterococcus faecium DO
Length = 35
Score = 41.1 bits (92), Expect = 0.010
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVL 36
G KWFN KG+GFI+ +D G DVFVH S +
Sbjct: 4 GTVKWFNAEKGFGFISRED-GSDVFVHFSAI 33
>UniRef50_P53849 Cluster: Zinc finger protein GIS2; n=7;
Saccharomycetales|Rep: Zinc finger protein GIS2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 153
Score = 41.1 bits (92), Expect = 0.010
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
+CYNCGE H+ ++C++ +RC NC H+ +CP
Sbjct: 48 QCYNCGE-TGHVRSECTV----QRCFNCNQTGHISRECP 81
Score = 38.3 bits (85), Expect = 0.073
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 80 PLSKIRFRKIRCYNCGEFANHIAAKC--SIGPQPKRCHNCKSEDHLVADC 127
P RF K+ CY CG NH+A C G +C+ C H+ DC
Sbjct: 83 PKKTSRFSKVSCYKCGG-PNHMAKDCMKEDGISGLKCYTCGQAGHMSRDC 131
Score = 37.9 bits (84), Expect = 0.097
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
++CY CG+ A H++ C + C+NC H+ DCP
Sbjct: 116 LKCYTCGQ-AGHMSRDCQ---NDRLCYNCNETGHISKDCP 151
Score = 32.3 bits (70), Expect = 4.8
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 91 CYNCGEFANHIAAKCSIGP--QPKRCHNCKSEDHLVADCPIK 130
CYNC + H+ C++ + K+C+NC H+ ++C ++
Sbjct: 25 CYNCNK-PGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQ 65
>UniRef50_UPI000023F0FC Cluster: hypothetical protein FG10143.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10143.1 - Gibberella zeae PH-1
Length = 434
Score = 40.7 bits (91), Expect = 0.014
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
+C+ CGE H A+C PQ C CK E H+ DCP
Sbjct: 52 KCFGCGEIG-HRRAECP-NPQEMACRYCKKEGHMRKDCP 88
Score = 33.5 bits (73), Expect = 2.1
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 8/44 (18%)
Query: 88 KIRCYNCGEFANHIAAKCSIGPQPK----RCHNCKSEDHLVADC 127
KI CYNCG H C P+P+ C NC H V DC
Sbjct: 269 KISCYNCGA-DGHRVRDC---PEPRVDKNACKNCGKSGHKVVDC 308
Score = 31.9 bits (69), Expect = 6.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 9/44 (20%)
Query: 91 CYNCGEFANHIAAKCSIGPQPK-----RCHNCKSEDHLVADCPI 129
C NCG+ H+A +C QP+ C NC+ + H +CP+
Sbjct: 340 CRNCGQ-EGHMAKECD---QPRDMSTVTCRNCEQQGHYSKECPL 379
>UniRef50_A3XVA6 Cluster: Putative uncharacterized protein; n=1;
Vibrio sp. MED222|Rep: Putative uncharacterized protein
- Vibrio sp. MED222
Length = 84
Score = 40.7 bits (91), Expect = 0.014
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG 40
RG WF++ G+GF PD G DV +H SV++ G
Sbjct: 8 RGYITWFHLENGFGFAKPDHGDIDVLIHISVIEFDG 43
>UniRef50_A2SHE7 Cluster: Cold-shock DNA-binding domain; n=1;
Methylibium petroleiphilum PM1|Rep: Cold-shock
DNA-binding domain - Methylibium petroleiphilum (strain
PM1)
Length = 203
Score = 40.7 bits (91), Expect = 0.014
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATR- 64
G+ K +N +G+GFI P GGQD+FVH R + V FE + G + R
Sbjct: 5 GKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGRPTVGQAVTFEVELGPNGKKRARS 64
Query: 65 VTGPNGTDCHGSDRRPL 81
V P G R+PL
Sbjct: 65 VQYP----VRGRSRKPL 77
>UniRef50_A0D610 Cluster: Chromosome undetermined scaffold_39, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_39,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 40.7 bits (91), Expect = 0.014
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPG 40
+++GR K+++ AK +GF+ D+ G DVFVH LQ G
Sbjct: 86 RQKGRMKFYDDAKKYGFLVLDEDGTDVFVHYDDLQAAG 123
>UniRef50_A0CW28 Cluster: Chromosome undetermined scaffold_3, whole
genome shotgun sequence; n=2; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_3, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 196
Score = 40.7 bits (91), Expect = 0.014
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 48 EVEFECKESDKGLEATRVTGPNGTDCHGSDRRPLSKIRFRKIR--CYNCGEFANHIAAKC 105
E E K++ ++ R+ G T D RP S +R R C+NCG H A +C
Sbjct: 44 EASDEAKQAISQVDGRRIGGDRVT-VKQRDDRP-SGVRGPTTRDVCFNCGR-KGHWANEC 100
Query: 106 SIGPQPKRCHNCKSEDHLVADCPI 129
G + C+ C + H+ +CP+
Sbjct: 101 KEGDLRETCYRCYKKGHIKKECPV 124
>UniRef50_Q6C9D6 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 197
Score = 40.7 bits (91), Expect = 0.014
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
CYNCG H++ C+ P+ K C C H++ +CP
Sbjct: 36 CYNCGN-DGHMSRDCTEEPKEKACFKCNQPGHILKECP 72
Score = 38.7 bits (86), Expect = 0.055
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKK 134
C+NCGEF + + A +G P C+NC ++ H+ DC + ++K
Sbjct: 15 CFNCGEFGHQVRACPRVG-NPV-CYNCGNDGHMSRDCTEEPKEK 56
Score = 37.9 bits (84), Expect = 0.097
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
+CYNCG H++ +C Q + C+NCK H+ C
Sbjct: 156 KCYNCGSMG-HVSKECGEA-QSRVCYNCKKPGHIAIKC 191
Score = 34.7 bits (76), Expect = 0.90
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
CY+CG H++ C++G ++C+NC S H+ +C
Sbjct: 138 CYSCGG-QGHLSKDCTVG---QKCYNCGSMGHVSKEC 170
>UniRef50_A5DEQ6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 352
Score = 40.7 bits (91), Expect = 0.014
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 60 LEATRVTGPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKS 119
+ A + GP +CH RR + + + + C+ CG +H +C P C C
Sbjct: 115 INALQSLGPLCANCH---RRGHIRAKCKTVVCHKCGVVGDHYETQC---PTTMVCSRCGQ 168
Query: 120 EDHLVADCPIKVEKKK 135
+ H+ A C K +K++
Sbjct: 169 KGHMAAGCTNKAKKRQ 184
>UniRef50_Q127M7 Cluster: Cold-shock DNA-binding domain protein;
n=1; Polaromonas sp. JS666|Rep: Cold-shock DNA-binding
domain protein - Polaromonas sp. (strain JS666 / ATCC
BAA-500)
Length = 193
Score = 40.3 bits (90), Expect = 0.018
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKG 59
G K +N +G GFI D GGQ++FVH S G E + FE + G
Sbjct: 10 GTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDGRLPAVGEPLSFEVEPDRDG 63
>UniRef50_Q03QI4 Cluster: Cold shock protein; n=4;
Lactobacillus|Rep: Cold shock protein - Lactobacillus
brevis (strain ATCC 367 / JCM 1170)
Length = 74
Score = 40.3 bits (90), Expect = 0.018
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 6 GRCKWFNVAKGWGFI-TPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEAT 63
G+ K +N +G+GFI TP DG DVFV+ + + GFR L + V+F + +G +A
Sbjct: 4 GKVKSYNEQRGFGFITTPADG--DVFVYYTGIIGEGFRKLEAGQTVQFVIVQGMRGPQAA 61
Query: 64 RVT 66
+VT
Sbjct: 62 KVT 64
>UniRef50_Q75IR8 Cluster: Putative uncharacterized protein
OSJNBb0099P06.5; n=2; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBb0099P06.5 - Oryza sativa
subsp. japonica (Rice)
Length = 338
Score = 40.3 bits (90), Expect = 0.018
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 18/134 (13%)
Query: 4 RRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEAT 63
R GR ++ ++ +GF+ D + + L + G + G + + + ++GL +
Sbjct: 40 RYGRVRFVDLKNEYGFVEFSDPRD---ANDARLDLDGRKYDGSDIIVQFARGVERGLGGS 96
Query: 64 RVTGPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHL 123
R G HGSD C+NCG H C+ G RC+ C H+
Sbjct: 97 R--GYKARPAHGSDH------------CFNCG-MEGHWHRNCTAGDWTNRCYGCGERGHI 141
Query: 124 VADCPIKVEKKKDE 137
+ +C + K E
Sbjct: 142 LRECKNSPKDLKQE 155
>UniRef50_Q5KGW6 Cluster: DNA-binding protein hexbp, putative; n=2;
Fungi/Metazoa group|Rep: DNA-binding protein hexbp,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 204
Score = 40.3 bits (90), Expect = 0.018
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
CYNCG + H++ +C P+ K C+ C E HL + CP
Sbjct: 30 CYNCG-LSGHLSRECP-QPKNKACYTCGQEGHLSSACP 65
Score = 37.9 bits (84), Expect = 0.097
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
+CYNCG+ HI+ +C Q K C++C H+ + CP
Sbjct: 159 KCYNCGQ-DGHISRECP-QEQGKTCYSCGQPGHIASACP 195
Score = 32.3 bits (70), Expect = 4.8
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 13/50 (26%)
Query: 91 CYNCGEFANHIAAKCSIGPQ------------PKRCHNCKSEDHLVADCP 128
CY CG HI+ +C G P++C+NC + H+ +CP
Sbjct: 126 CYTCGG-VGHISRECPSGASRGFGGGGGGFGGPRKCYNCGQDGHISRECP 174
>UniRef50_A1D3L6 Cluster: Zinc knuckle domain protein; n=7;
Pezizomycotina|Rep: Zinc knuckle domain protein -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 170
Score = 40.3 bits (90), Expect = 0.018
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 87 RKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKKK 135
R+ CY+CG F H+A C+ G ++C+NC H+ DCP + + ++
Sbjct: 109 RQQTCYSCGGFG-HMARDCTHG---QKCYNCGDVGHVSRDCPTEAKGER 153
Score = 38.7 bits (86), Expect = 0.055
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKR-CHNCKSEDHLVADCP 128
+CYNCG+ H++ C + +R C+ CK H+ A CP
Sbjct: 131 KCYNCGD-VGHVSRDCPTEAKGERVCYKCKQPGHVQAACP 169
Score = 31.5 bits (68), Expect = 8.4
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 100 HIAAKCSIGPQPKRCHNCKSEDHLVADC 127
H++ +C++ P+ K C+ C H+ +C
Sbjct: 32 HVSRECTVAPKEKSCYRCGVAGHISREC 59
>UniRef50_Q8AII1 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol)
[Contains: Matrix protein p17 (MA); Capsid protein p24
(CA); Nucleocapsid protein p7 (NC); p6-pol (p6*);
Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7)
(EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase (IN)];
n=133; Primate lentivirus group|Rep: Gag-Pol polyprotein
(Pr160Gag-Pol) [Contains: Matrix protein p17 (MA);
Capsid protein p24 (CA); Nucleocapsid protein p7 (NC);
p6-pol (p6*); Protease (EC 3.4.23.16) (Retropepsin)
(PR); Reverse transcriptase/ribonuclease H (EC 2.7.7.49)
(EC 2.7.7.7) (EC 3.1.26.4) (p66 RT); p51 RT; p15;
Integrase (IN)] - Simian immunodeficiency virus (isolate
TAN1) (SIV-cpz) (Chimpanzeeimmunodeficiency virus)
Length = 1462
Score = 40.3 bits (90), Expect = 0.018
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 75 GSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
G R PL K +++C+NCG+ H A C P+ K C C E H + DC
Sbjct: 406 GGKRPPLKK---GQLQCFNCGK-VGHTARNCR-APRKKGCWRCGQEGHQMKDC 453
>UniRef50_Q0RYK4 Cluster: Probable cold shock protein CspA; n=1;
Rhodococcus sp. RHA1|Rep: Probable cold shock protein
CspA - Rhodococcus sp. (strain RHA1)
Length = 79
Score = 39.9 bits (89), Expect = 0.024
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 12 NVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKGLEA 62
N KG+GF PD G VFVH S + GF++L + + +E+E + KG++A
Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQA 73
>UniRef50_Q9VVA0 Cluster: CG9705-PA, isoform A; n=4; Diptera|Rep:
CG9705-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 143
Score = 39.9 bits (89), Expect = 0.024
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDE 47
G K F+ KG GFITP+ GG+DVF H S ++ GDE
Sbjct: 57 GMVKSFSRTKGHGFITPNAGGEDVFCHVSDIEGEYVPMPGDE 98
>UniRef50_UPI0000D57810 Cluster: PREDICTED: similar to CG9705-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG9705-PA, isoform A - Tribolium castaneum
Length = 121
Score = 39.5 bits (88), Expect = 0.032
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQ 37
G K F KG GFITP+DG +D+FVH S ++
Sbjct: 44 GEIKSFCREKGHGFITPEDGSEDIFVHISDIE 75
>UniRef50_A1GFH1 Cluster: Cold-shock DNA-binding domain protein;
n=2; Salinispora|Rep: Cold-shock DNA-binding domain
protein - Salinispora arenicola CNS205
Length = 139
Score = 39.5 bits (88), Expect = 0.032
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATR 64
+G F+ +G+GFI P GG DVFVH + V +E +S++GL+
Sbjct: 4 KGTIVRFDDVRGYGFIAPFGGGDDVFVHANDFGDQRHAVAAGMRVSYEVVQSERGLKVAS 63
Query: 65 V 65
V
Sbjct: 64 V 64
>UniRef50_Q8I248 Cluster: Cold-shock protein, putative; n=3;
Plasmodium|Rep: Cold-shock protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 150
Score = 39.5 bits (88), Expect = 0.032
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 3 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQS-VLQMPGFRSLGDEE 48
K G F+ KG+GFI P+DGG D+FVH + + Q F +E+
Sbjct: 29 KITGNVIMFDKRKGYGFIKPNDGGPDIFVHYTDICQSRTFEVTNEEK 75
>UniRef50_Q7JQ89 Cluster: CnjB protein; n=3; Tetrahymena
thermophila|Rep: CnjB protein - Tetrahymena thermophila
Length = 1748
Score = 39.5 bits (88), Expect = 0.032
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 70 GTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKC--SIGPQPKRCHNCKSEDHLVADC 127
G + H S P + + +K C+ C + HI+ C S +C NC E H+ DC
Sbjct: 1534 GEEGHISKDCPNPQKQQQKNTCFKCKQ-EGHISKDCPNSQNSGGNKCFNCNQEGHMSKDC 1592
Query: 128 PIKVEKKK 135
P +KKK
Sbjct: 1593 PNPSQKKK 1600
Score = 35.5 bits (78), Expect = 0.52
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKR-----CHNCKSEDHLVADCPIKVEKK 134
C+ CG+ H+A C+ Q R C C E H+ DCP + +KK
Sbjct: 1451 CFKCGK-VGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKK 1498
Score = 31.5 bits (68), Expect = 8.4
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKR-CHNCKSEDHLVADC 127
+C+NC + H++ C Q K+ C NC E H +C
Sbjct: 1578 KCFNCNQ-EGHMSKDCPNPSQKKKGCFNCGEEGHQSREC 1615
>UniRef50_Q383X8 Cluster: Nucleic acid binding protein, putative;
n=3; Trypanosoma|Rep: Nucleic acid binding protein,
putative - Trypanosoma brucei
Length = 516
Score = 39.5 bits (88), Expect = 0.032
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIK 130
RCYNCG + H + +C P C++C S H DCP++
Sbjct: 103 RCYNCGNYG-HSSQRCLSRPL---CYHCSSTGHRSTDCPLR 139
Score = 31.9 bits (69), Expect = 6.4
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
C +CG + H A C + + C C + HL+ CP
Sbjct: 64 CRSCGS-SRHAEASCPLRMKSMECFQCHQKGHLLPMCP 100
>UniRef50_Q16VC4 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 809
Score = 39.5 bits (88), Expect = 0.032
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 87 RKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
++I C NCGE H+ KC P+PK C+ C H CP
Sbjct: 698 KEIICNNCGE-RGHMRYKCRNPPKPKTCYMCGLAGHQEVRCP 738
>UniRef50_Q2UBG0 Cluster: E3 ubiquitin ligase interacting with
arginine methyltransferase; n=4; Aspergillus|Rep: E3
ubiquitin ligase interacting with arginine
methyltransferase - Aspergillus oryzae
Length = 190
Score = 39.5 bits (88), Expect = 0.032
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKR-CHNCKSEDHLVADCP 128
+CYNCGE H++ C + +R C+ CK H+ A CP
Sbjct: 151 KCYNCGE-VGHVSRDCPSEARGERVCYKCKQPGHVQAACP 189
Score = 36.7 bits (81), Expect = 0.22
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 87 RKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
R+ CY+CG H+A C+ G ++C+NC H+ DCP
Sbjct: 129 RQHTCYSCGGHG-HMARDCTHG---QKCYNCGEVGHVSRDCP 166
Score = 34.7 bits (76), Expect = 0.90
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 77 DRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
DR P + + R C F + +C++ P+ K C+ C H+ DCP
Sbjct: 36 DRSPSLERSYELDRIRGCVGFDDE-RRECTVAPKEKPCYRCSGVGHISRDCP 86
>UniRef50_P22381 Cluster: Gag polyprotein [Contains: Core protein
p17; Core protein p24; Core protein p15]; n=6; Simian
immunodeficiency virus|Rep: Gag polyprotein [Contains:
Core protein p17; Core protein p24; Core protein p15] -
Simian immunodeficiency virus (isolate GB1) (SIV-mnd)
(Simianimmunodeficiency virus mandrill)
Length = 502
Score = 39.5 bits (88), Expect = 0.032
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 75 GSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKVEKK 134
G R P+ + RK C+NC + H+A + P+ K C NC + DH A CP +++
Sbjct: 372 GPQRGPVRQPTGRKPICFNCNK-EGHVA-RFFKAPRRKGCWNCGAMDHQKAQCPKPAQQQ 429
Query: 135 K 135
+
Sbjct: 430 R 430
>UniRef50_P62633 Cluster: Cellular nucleic acid-binding protein;
n=57; Euteleostomi|Rep: Cellular nucleic acid-binding
protein - Homo sapiens (Human)
Length = 177
Score = 39.5 bits (88), Expect = 0.032
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 88 KIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIK 130
K++CY CGE H+A CS C+ C HL +C I+
Sbjct: 134 KVKCYRCGE-TGHVAINCS-KTSEVNCYRCGESGHLARECTIE 174
Score = 38.3 bits (85), Expect = 0.073
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKR-----CHNCKSEDHLVADCPIKVEKK 134
CYNCG HIA C +PKR C+NC HL DC E+K
Sbjct: 74 CYNCGR-GGHIAKDCK---EPKREREQCCYNCGKPGHLARDCDHADEQK 118
Score = 37.1 bits (82), Expect = 0.17
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 91 CYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
CY CGE + H+A C + Q C+NC H+ DC
Sbjct: 54 CYRCGE-SGHLAKDCDL--QEDACYNCGRGGHIAKDC 87
Score = 31.9 bits (69), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADC 127
+CY+CGEF HI C+ +C+ C H+ +C
Sbjct: 118 KCYSCGEF-GHIQKDCT----KVKCYRCGETGHVAINC 150
>UniRef50_O33052 Cluster: Small cold-shock protein; n=7;
Corynebacterineae|Rep: Small cold-shock protein -
Mycobacterium leprae
Length = 136
Score = 39.1 bits (87), Expect = 0.042
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSL-GDEEVEFECKESDKGLEA 62
G+ KW++ KG+GF++ +D G+DV+V S L G L + VEF +G +A
Sbjct: 4 GKVKWYDADKGFGFLSQED-GEDVYVRSSALP-AGVEGLKAGQRVEFGVASGRRGPQA 59
>UniRef50_Q9ZV83 Cluster: Putative gag-protease polyprotein; n=1;
Arabidopsis thaliana|Rep: Putative gag-protease
polyprotein - Arabidopsis thaliana (Mouse-ear cress)
Length = 627
Score = 39.1 bits (87), Expect = 0.042
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 87 RKIRCYNCGEFANHIAAKCSIGPQPK-RCHNCKSEDHLVADCPIKVEKKK 135
++I+CY CG F HI +C I + + +C CK H +CP K + K+
Sbjct: 260 KEIQCYECGGFG-HIKPECPITKRKEMKCLKCKGVGHTKFECPNKSKLKE 308
>UniRef50_Q7XEL6 Cluster: Zinc knuckle family protein; n=3; Oryza
sativa|Rep: Zinc knuckle family protein - Oryza sativa
subsp. japonica (Rice)
Length = 800
Score = 39.1 bits (87), Expect = 0.042
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 88 KIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCPIKV 131
+I+C+NCGE H C +P C+ CK+ H+ + CP+ V
Sbjct: 251 EIKCFNCGESGYH-QVNCQ---KPPLCYVCKNPGHISSHCPVHV 290
>UniRef50_Q4DP50 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 710
Score = 39.1 bits (87), Expect = 0.042
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVF 30
G++ GRC F +KG+GF+ P+ GG D++
Sbjct: 296 GIRHEGRCVLFRNSKGFGFVAPEVGGPDIY 325
>UniRef50_UPI0000F1FB24 Cluster: PREDICTED: similar to novel
transposon; n=4; Danio rerio|Rep: PREDICTED: similar to
novel transposon - Danio rerio
Length = 1299
Score = 38.7 bits (86), Expect = 0.055
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 48 EVEFECKESDKGLEATRVTGPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSI 107
E+ + ++K + R + + H + RP S+ R+ +CY C NH A C
Sbjct: 157 EIALSMETAEKDTQQLRGHDSHSSVVHKVEVRPFSQ---REKKCYRC-HGKNHSAQVCHF 212
Query: 108 GPQPKRCHNCKSEDHLVADCPIKVEKKK 135
+ RCHNC H+ C K+E K
Sbjct: 213 --KDARCHNCGKIGHIKRACRGKMEVGK 238
>UniRef50_UPI0000E4A204 Cluster: PREDICTED: similar to zinc finger
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to zinc finger protein -
Strongylocentrotus purpuratus
Length = 257
Score = 38.7 bits (86), Expect = 0.055
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
++CYNCG+ H+ C P K C+ C S +H+ A CP
Sbjct: 94 VKCYNCGK-KGHMKNVC---PDGKACYVCGSSEHVKAQCP 129
Score = 35.5 bits (78), Expect = 0.52
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 87 RKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
R RCY C +F H A C + C+ C H+ + CP
Sbjct: 47 RDTRCYKCNQFG-HRARDCQDTAEEDLCYRCGEPGHISSGCP 87
>UniRef50_UPI0000E49DCE Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 421
Score = 38.7 bits (86), Expect = 0.055
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 89 IRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
++CYNCG+ H+ C P K C+ C S +H+ A CP
Sbjct: 258 VKCYNCGK-KGHMKNVC---PDGKACYVCGSSEHVKAQCP 293
Score = 34.3 bits (75), Expect = 1.2
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 90 RCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVADCP 128
RCY C +F H A C + C+ C H+ + CP
Sbjct: 214 RCYKCNQFG-HRARDCQDTAEEDLCYRCGEPGHISSGCP 251
>UniRef50_UPI0000DC0B82 Cluster: UPI0000DC0B82 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B82 UniRef100 entry -
Rattus norvegicus
Length = 147
Score = 38.7 bits (86), Expect = 0.055
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 2 VKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQM--PGF-RSLGDEE 48
+K G WFNV G+ FI +D +D FVHQ+V++ P + S+GD E
Sbjct: 94 MKVLGIVTWFNVRNGYVFINRNDTKEDTFVHQTVIKKNNPKYLHSVGDGE 143
>UniRef50_Q607Y7 Cluster: Cold-shock DNA-binding domain protein;
n=1; Methylococcus capsulatus|Rep: Cold-shock
DNA-binding domain protein - Methylococcus capsulatus
Length = 305
Score = 38.7 bits (86), Expect = 0.055
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 1 GVKRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQ-MPGFRSLGDEEVEFECKESDKG 59
G + G F KG+GFITPD+GG + F H S L + + F +DKG
Sbjct: 234 GAEISGTVLSFFHEKGFGFITPDNGGDNFFFHVSDLTGIEASDVCAGLRISFNAGRNDKG 293
Query: 60 LEATRV 65
L A +
Sbjct: 294 LAAHNI 299
>UniRef50_Q5Z0N3 Cluster: Putative cold shock protein; n=1;
Nocardia farcinica|Rep: Putative cold shock protein -
Nocardia farcinica
Length = 89
Score = 38.7 bits (86), Expect = 0.055
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQ-DVFVHQSVLQMPGFRSL 44
G WF+ KG+GFI P +G + VFV S ++M G+R+L
Sbjct: 17 GTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTL 56
>UniRef50_Q475L4 Cluster: Cold-shock protein, DNA-binding; n=1;
Ralstonia eutropha JMP134|Rep: Cold-shock protein,
DNA-binding - Ralstonia eutropha (strain JMP134)
(Alcaligenes eutrophus)
Length = 195
Score = 38.7 bits (86), Expect = 0.055
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 6 GRCKWFNVAKGWGFITPDDGGQDVFVHQS 34
G K +N KG+GFI P +GG+D+FVH S
Sbjct: 14 GTLKSWNKDKGFGFIAPSNGGRDIFVHIS 42
>UniRef50_Q024L3 Cluster: Cold-shock DNA-binding domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: Cold-shock
DNA-binding domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 144
Score = 38.7 bits (86), Expect = 0.055
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 14 AKGWGFITPDDGGQDVFVHQSVL 36
AKG+GF+ PDDGG+D+F H S L
Sbjct: 79 AKGFGFLRPDDGGRDIFFHVSRL 101
>UniRef50_A6W4V4 Cluster: Putative cold-shock DNA-binding domain
protein; n=1; Kineococcus radiotolerans SRS30216|Rep:
Putative cold-shock DNA-binding domain protein -
Kineococcus radiotolerans SRS30216
Length = 156
Score = 38.7 bits (86), Expect = 0.055
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 5 RGRCKWFNVAKGWGFITPDDGGQDVFVH-QSVLQMPGFRSLGDEEVEFECKESDKGLEAT 63
+G+ + F+ +G+GFIT D ++VF H + V+ + L V+F + D+G +AT
Sbjct: 6 KGKVRSFDDGRGFGFITSPDCPENVFFHVKDVVDLEA-EDLEGASVQFTLDQGDRGYKAT 64
Query: 64 RVTGPNGTDCHGSDR 78
V P G+ G R
Sbjct: 65 DVR-PLGSAGRGPSR 78
>UniRef50_Q6CGQ4 Cluster: Similar to sp|P40507 Saccharomyces
cerevisiae YIL079c; n=1; Yarrowia lipolytica|Rep:
Similar to sp|P40507 Saccharomyces cerevisiae YIL079c -
Yarrowia lipolytica (Candida lipolytica)
Length = 351
Score = 38.7 bits (86), Expect = 0.055
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 67 GPNGTDCHGSDRRPLSKIRFRKIRCYNCGEFANHIAAKCSIGPQPKRCHNCKSEDHLVAD 126
GP CH +R + +RC+ CG +H A C++ ++C NC HL A+
Sbjct: 73 GPTCRTCH---KRGHISADCKVMRCFTCGALEDHDTADCTM---LRKCSNCGESGHLRAE 126
Query: 127 C 127
C
Sbjct: 127 C 127
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.320 0.139 0.459
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,346,273
Number of Sequences: 1657284
Number of extensions: 6675048
Number of successful extensions: 14060
Number of sequences better than 10.0: 469
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 13297
Number of HSP's gapped (non-prelim): 812
length of query: 154
length of database: 575,637,011
effective HSP length: 94
effective length of query: 60
effective length of database: 419,852,315
effective search space: 25191138900
effective search space used: 25191138900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 68 (31.5 bits)
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