Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000375-TA|BGIBMGA000375-PA|IPR001269|Dihydrouridine
synthase, DuS
(222 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62767-1|AAD00100.1| 307|Homo sapiens PP35 protein. 214 2e-55
BC064918-1|AAH64918.1| 473|Homo sapiens dihydrouridine synthase... 115 1e-25
BC062566-1|AAH62566.1| 473|Homo sapiens DUS1L protein protein. 115 1e-25
BC111774-1|AAI11775.1| 196|Homo sapiens DUS4L protein protein. 92 2e-18
BC017081-1|AAH17081.4| 406|Homo sapiens DUS1L protein protein. 89 1e-17
BC006527-1|AAH06527.1| 493|Homo sapiens dihydrouridine synthase... 79 1e-14
AK000406-1|BAA91143.1| 493|Homo sapiens protein ( Homo sapiens ... 79 1e-14
AB101210-1|BAE07219.1| 493|Homo sapiens up-regulated in lung ca... 79 1e-14
BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase... 58 3e-08
BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein. 58 3e-08
BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein. 58 3e-08
AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens ... 58 3e-08
AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein. 54 3e-07
AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein, s... 50 9e-06
BC003659-1|AAH03659.2| 299|Homo sapiens DUS1L protein protein. 49 1e-05
BC039583-1|AAH39583.2| 849|Homo sapiens MGEA5 protein protein. 31 2.4
BC001343-1|AAH01343.1| 404|Homo sapiens Similar to meningioma e... 31 2.4
AF036144-1|AAD05385.2| 916|Homo sapiens meningioma-expressed an... 31 2.4
AB014579-1|BAA31654.2| 917|Homo sapiens KIAA0679 protein protein. 31 2.4
BC104964-1|AAI04965.1| 1453|Homo sapiens CD163 molecule-like 1 p... 30 7.4
BC104962-1|AAI04963.1| 1453|Homo sapiens scavenger receptor cyst... 30 7.4
AF264014-1|AAF91396.1| 1453|Homo sapiens scavenger receptor cyst... 30 7.4
>U62767-1|AAD00100.1| 307|Homo sapiens PP35 protein.
Length = 307
Score = 214 bits (522), Expect = 2e-55
Identities = 95/198 (47%), Positives = 143/198 (72%), Gaps = 1/198 (0%)
Query: 21 LKVCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQ 80
+KVCAPMVRYSK+ FRTLVR ++ DLC+TPMI+A F ++ KAR +EF T D P+I Q
Sbjct: 18 VKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKARDSEFTTNQGDCPLIVQ 77
Query: 81 FAANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNV 140
FAAN+ DA+++V PY +G+D+NCGCPQ+WAM +GYG L++KPE++ D+VK +RN
Sbjct: 78 FAANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINKPELVQDMVKQVRNQ 137
Query: 141 LPNK-FSISVKIRLLNDIKKTVILCQQLEKCGVTFLTSMEEHCTKSSGPVDINGLKEVRE 199
+ FS+S+KIR+ +D+K+TV LCQ+ E GV+++T + PV + +K ++E
Sbjct: 138 VETPGFSVSIKIRINDDLKRTVDLCQKAEATGVSWITVHGRTAEERHQPVHYDSIKIIKE 197
Query: 200 ALSVPMVANGGVKHLNDA 217
+ +P++ANG ++ L +A
Sbjct: 198 NMCIPVIANGDIRSLKEA 215
>BC064918-1|AAH64918.1| 473|Homo sapiens dihydrouridine synthase
1-like (S. cerevisiae) protein.
Length = 473
Score = 115 bits (277), Expect = 1e-25
Identities = 73/201 (36%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTT--DFPVIAQ 80
V APMV S++ +R L R A LC+TPM+ A F +++ R D P+I Q
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPEDRPLIVQ 79
Query: 81 FAANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNV 140
F AN+ + FV A+ L Y D +DLN GCPQ A + YG L + +D+++ + +
Sbjct: 80 FCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDE----WDLLQRMILL 135
Query: 141 LPNKFSISV--KIRLLNDIKKTVILCQQLEKCGVTFLT---SMEEHCTKSSGPVDINGLK 195
K S+ V KIR+ +I KTV Q LEK G LT +E SG +K
Sbjct: 136 AHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIK 195
Query: 196 EVREALSVPMVANGGVKHLND 216
VR+A+++P+ ANG ++ L D
Sbjct: 196 AVRKAVAIPVFANGNIQCLQD 216
>BC062566-1|AAH62566.1| 473|Homo sapiens DUS1L protein protein.
Length = 473
Score = 115 bits (277), Expect = 1e-25
Identities = 73/201 (36%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTT--DFPVIAQ 80
V APMV S++ +R L R A LC+TPM+ A F +++ R D P+I Q
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPEDRPLIVQ 79
Query: 81 FAANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNV 140
F AN+ + FV A+ L Y D +DLN GCPQ A + YG L + +D+++ + +
Sbjct: 80 FCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDE----WDLLQRMILL 135
Query: 141 LPNKFSISV--KIRLLNDIKKTVILCQQLEKCGVTFLT---SMEEHCTKSSGPVDINGLK 195
K S+ V KIR+ +I KTV Q LEK G LT +E SG +K
Sbjct: 136 AHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIK 195
Query: 196 EVREALSVPMVANGGVKHLND 216
VR+A+++P+ ANG ++ L D
Sbjct: 196 AVRKAVAIPVFANGNIQCLQD 216
>BC111774-1|AAI11775.1| 196|Homo sapiens DUS4L protein protein.
Length = 196
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/104 (39%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 115 MKDGYGCSLLSKPEIIYDIVKGLRNVLPNK-FSISVKIRLLNDIKKTVILCQQLEKCGVT 173
M +GYG L++KPE++ D+VK +RN + FS+S+KIR+ +D+K+TV LCQ+ E GV+
Sbjct: 1 MAEGYGACLINKPELVQDMVKQVRNQVETPGFSVSIKIRIHDDLKRTVDLCQKAEATGVS 60
Query: 174 FLTSMEEHCTKSSGPVDINGLKEVREALSVPMVANGGVKHLNDA 217
++T + PV + +K ++E +S+P++ANG ++ L +A
Sbjct: 61 WITVHGRTAEERHQPVHYDSIKIIKENMSIPVIANGDIRSLKEA 104
>BC017081-1|AAH17081.4| 406|Homo sapiens DUS1L protein protein.
Length = 406
Score = 89.0 bits (211), Expect = 1e-17
Identities = 55/148 (37%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 74 DFPVIAQFAANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDI 133
D P+I QF AN+ + FV A+ L Y D +DLN GCPQ A + YG L + +D+
Sbjct: 6 DRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDE----WDL 61
Query: 134 VKGLRNVLPNKFSISV--KIRLLNDIKKTVILCQQLEKCGVTFLT---SMEEHCTKSSGP 188
++ + + K S+ V KIR+ +I KTV Q LEK G LT +E SG
Sbjct: 62 LQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGA 121
Query: 189 VDINGLKEVREALSVPMVANGGVKHLND 216
+K VR+A+++P+ ANG ++ L D
Sbjct: 122 ASWEHIKAVRKAVAIPVFANGNIQCLQD 149
>BC006527-1|AAH06527.1| 493|Homo sapiens dihydrouridine synthase
2-like, SMM1 homolog (S. cerevisiae) protein.
Length = 493
Score = 79.0 bits (186), Expect = 1e-14
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 22/206 (10%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFP------ 76
+ APMVR + R L ++ AD+ + ++ Q K NE ++T DF
Sbjct: 15 ILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQ-CKRVVNEVLSTV-DFVAPDDRV 72
Query: 77 -----------VIAQFAANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLS 125
V+ Q ++ + + ++LV V G+D+N GCP++++ K G G +LLS
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLS 132
Query: 126 KPEIIYDIVKGLRNVLPNKFSISVKIRLLNDIKKTVILCQQLEKCGVTFL-TSMEEHCTK 184
P+ I I+ L V + ++ KIR+L ++ T+ L +++E+ G+ + + +
Sbjct: 133 DPDKIEKILSTL--VKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHGRKREER 190
Query: 185 SSGPVDINGLKEVREALSVPMVANGG 210
PV +K + + LS+P++ANGG
Sbjct: 191 PQHPVSCEVIKAIADTLSIPVIANGG 216
>AK000406-1|BAA91143.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ20399 fis, clone KAT00581. ).
Length = 493
Score = 79.0 bits (186), Expect = 1e-14
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 22/206 (10%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFP------ 76
+ APMVR + R L ++ AD+ + ++ Q K NE ++T DF
Sbjct: 15 ILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQ-CKRVVNEVLSTV-DFVAPDDRV 72
Query: 77 -----------VIAQFAANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLS 125
V+ Q ++ + + ++LV V G+D+N GCP++++ K G G +LLS
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLS 132
Query: 126 KPEIIYDIVKGLRNVLPNKFSISVKIRLLNDIKKTVILCQQLEKCGVTFL-TSMEEHCTK 184
P+ I I+ L V + ++ KIR+L ++ T+ L +++E+ G+ + + +
Sbjct: 133 DPDKIEKILSTL--VKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHGRKREER 190
Query: 185 SSGPVDINGLKEVREALSVPMVANGG 210
PV +K + + LS+P++ANGG
Sbjct: 191 PQHPVSCEVIKAIADTLSIPVIANGG 216
>AB101210-1|BAE07219.1| 493|Homo sapiens up-regulated in lung
cancer 8 protein.
Length = 493
Score = 79.0 bits (186), Expect = 1e-14
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 22/206 (10%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFP------ 76
+ APMVR + R L ++ AD+ + ++ Q K NE ++T DF
Sbjct: 15 ILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQ-CKRVVNEVLSTV-DFVAPDDRV 72
Query: 77 -----------VIAQFAANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLS 125
V+ Q ++ + + ++LV V G+D+N GCP++++ K G G +LLS
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLS 132
Query: 126 KPEIIYDIVKGLRNVLPNKFSISVKIRLLNDIKKTVILCQQLEKCGVTFL-TSMEEHCTK 184
P+ I I+ L V + ++ KIR+L ++ T+ L +++E+ G+ + + +
Sbjct: 133 DPDKIEKILSTL--VKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHGRKREER 190
Query: 185 SSGPVDINGLKEVREALSVPMVANGG 210
PV +K + + LS+P++ANGG
Sbjct: 191 PQHPVSCEVIKAIADTLSIPVIANGG 216
>BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase
3-like (S. cerevisiae) protein.
Length = 650
Score = 57.6 bits (133), Expect = 3e-08
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 25 APMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQFAAN 84
AP+ + FR + + F AD+ M + + Q + + Q
Sbjct: 310 APLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDIFGVQLEGA 369
Query: 85 NRDDFVDASKLVYPYV--DGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNVLP 142
D ++L+ V D VD+N GCP K G GC+L+++ IV+G+ VL
Sbjct: 370 FPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLD 429
Query: 143 NKFSISVKIRLLNDIKKTVILCQQLEKCGVTFLT----SMEEHCTKSSGPVDINGLKE-V 197
++ ++ + + L +L GV +T S E+ TK + D ++E V
Sbjct: 430 VPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLHGRSREQRYTKLA---DWQYIEECV 486
Query: 198 REALSVPMVANGGVKHLNDATTYMK 222
+ A +P+ NG + DA M+
Sbjct: 487 QAASPMPLFGNGDILSFEDANRAMQ 511
>BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein.
Length = 613
Score = 57.6 bits (133), Expect = 3e-08
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 25 APMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQFAAN 84
AP+ + FR + + F AD+ M + + Q + + Q
Sbjct: 273 APLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDIFGVQLEGA 332
Query: 85 NRDDFVDASKLVYPYV--DGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNVLP 142
D ++L+ V D VD+N GCP K G GC+L+++ IV+G+ VL
Sbjct: 333 FPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLD 392
Query: 143 NKFSISVKIRLLNDIKKTVILCQQLEKCGVTFLT----SMEEHCTKSSGPVDINGLKE-V 197
++ ++ + + L +L GV +T S E+ TK + D ++E V
Sbjct: 393 VPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLHGRSREQRYTKLA---DWQYIEECV 449
Query: 198 REALSVPMVANGGVKHLNDATTYMK 222
+ A +P+ NG + DA M+
Sbjct: 450 QAASPMPLFGNGDILSFEDANRAMQ 474
>BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein.
Length = 408
Score = 57.6 bits (133), Expect = 3e-08
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 25 APMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQFAAN 84
AP+ + FR + + F AD+ M + + Q + + Q
Sbjct: 68 APLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDIFGVQLEGA 127
Query: 85 NRDDFVDASKLVYPYV--DGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNVLP 142
D ++L+ V D VD+N GCP K G GC+L+++ IV+G+ VL
Sbjct: 128 FPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLD 187
Query: 143 NKFSISVKIRLLNDIKKTVILCQQLEKCGVTFLT----SMEEHCTKSSGPVDINGLKE-V 197
++ ++ + + L +L GV +T S E+ TK + D ++E V
Sbjct: 188 VPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLHGRSREQRYTKLA---DWQYIEECV 244
Query: 198 REALSVPMVANGGVKHLNDATTYMK 222
+ A +P+ NG + DA M+
Sbjct: 245 QAASPMPLFGNGDILSFEDANRAMQ 269
>AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
NIFR3-LIKE PROTEIN. ).
Length = 650
Score = 57.6 bits (133), Expect = 3e-08
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 25 APMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQFAAN 84
AP+ + FR + + F AD+ M + + Q + + Q
Sbjct: 310 APLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDIFGVQLEGA 369
Query: 85 NRDDFVDASKLVYPYV--DGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNVLP 142
D ++L+ V D VD+N GCP K G GC+L+++ IV+G+ VL
Sbjct: 370 FPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLD 429
Query: 143 NKFSISVKIRLLNDIKKTVILCQQLEKCGVTFLT----SMEEHCTKSSGPVDINGLKE-V 197
++ ++ + + L +L GV +T S E+ TK + D ++E V
Sbjct: 430 VPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLHGRSREQRYTKLA---DWQYIEECV 486
Query: 198 REALSVPMVANGGVKHLNDATTYMK 222
+ A +P+ NG + DA M+
Sbjct: 487 QAASPMPLFGNGDILSFEDANRAMQ 511
>AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein.
Length = 223
Score = 54.4 bits (125), Expect = 3e-07
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 100 VDGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNVLPNKFSISVKIRLLNDIKK 159
VD VD+N GCP K G GC+L+++ IV+G+ VL ++ ++ + +
Sbjct: 11 VDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQERVNL 70
Query: 160 TVILCQQLEKCGVTFLT----SMEEHCTKSSGPVDINGLKE-VREALSVPMVANGGVKHL 214
L +L GV +T S E+ TK + D ++E V+ A +P+ NG +
Sbjct: 71 AHRLLPELRDWGVALVTLHGRSREQRYTKLA---DWQYIEECVQAASPMPLFGNGDILSF 127
Query: 215 NDATTYMK 222
DA M+
Sbjct: 128 EDANRAMQ 135
>AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein,
similar to (AF091072.1) predicted protein [Homo sapiens]
protein.
Length = 465
Score = 49.6 bits (113), Expect = 9e-06
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 2/154 (1%)
Query: 25 APMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQFAAN 84
AP+ + FR + + F AD+ M + + Q + + Q
Sbjct: 293 APLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDIFGVQLEGA 352
Query: 85 NRDDFVDASKLVYPYV--DGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNVLP 142
D ++L+ V D VD+N GCP K G GC+L+++ IV+G+ VL
Sbjct: 353 FPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLD 412
Query: 143 NKFSISVKIRLLNDIKKTVILCQQLEKCGVTFLT 176
++ ++ + + L +L GV +T
Sbjct: 413 VPLTVKIRTGVQERVNLAHRLLPELRDWGVALVT 446
>BC003659-1|AAH03659.2| 299|Homo sapiens DUS1L protein protein.
Length = 299
Score = 48.8 bits (111), Expect = 1e-05
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 146 SISVKIRLLNDIKKTVILCQQLEKCGVTFLT---SMEEHCTKSSGPVDINGLKEVREALS 202
S++ KIR+ +I KTV Q LEK G LT +E SG +K VR+A++
Sbjct: 12 SVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKAVRKAVA 71
Query: 203 VPMVANGGVKHLND 216
+P+ ANG ++ L D
Sbjct: 72 IPVFANGNIQCLQD 85
>BC039583-1|AAH39583.2| 849|Homo sapiens MGEA5 protein protein.
Length = 849
Score = 31.5 bits (68), Expect = 2.4
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 117 DGYGCSLLSKPEIIYD-IVKGLRNV-LPNKFSISVKIRLLNDIKKTVILCQQLEKCGVTF 174
DG G S+P++I D +V GL ++ L F + + + TV + ++KC +++
Sbjct: 671 DGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISW 730
Query: 175 LTSMEEHCTKSSGPVDINGLKEV 197
+ M+E TK +G +++ +++
Sbjct: 731 IPFMQEKYTKPNGDKELSEAEKI 753
>BC001343-1|AAH01343.1| 404|Homo sapiens Similar to meningioma
expressed antigen 5 (hyaluronidase) protein.
Length = 404
Score = 31.5 bits (68), Expect = 2.4
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 117 DGYGCSLLSKPEIIYD-IVKGLRNV-LPNKFSISVKIRLLNDIKKTVILCQQLEKCGVTF 174
DG G S+P++I D +V GL ++ L F + + + TV + ++KC +++
Sbjct: 226 DGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISW 285
Query: 175 LTSMEEHCTKSSGPVDINGLKEV 197
+ M+E TK +G +++ +++
Sbjct: 286 IPFMQEKYTKPNGDKELSEAEKI 308
>AF036144-1|AAD05385.2| 916|Homo sapiens meningioma-expressed
antigen 5 protein.
Length = 916
Score = 31.5 bits (68), Expect = 2.4
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 117 DGYGCSLLSKPEIIYD-IVKGLRNV-LPNKFSISVKIRLLNDIKKTVILCQQLEKCGVTF 174
DG G S+P++I D +V GL ++ L F + + + TV + ++KC +++
Sbjct: 738 DGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISW 797
Query: 175 LTSMEEHCTKSSGPVDINGLKEV 197
+ M+E TK +G +++ +++
Sbjct: 798 IPFMQEKYTKPNGDKELSEAEKI 820
>AB014579-1|BAA31654.2| 917|Homo sapiens KIAA0679 protein protein.
Length = 917
Score = 31.5 bits (68), Expect = 2.4
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 117 DGYGCSLLSKPEIIYD-IVKGLRNV-LPNKFSISVKIRLLNDIKKTVILCQQLEKCGVTF 174
DG G S+P++I D +V GL ++ L F + + + TV + ++KC +++
Sbjct: 739 DGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISW 798
Query: 175 LTSMEEHCTKSSGPVDINGLKEV 197
+ M+E TK +G +++ +++
Sbjct: 799 IPFMQEKYTKPNGDKELSEAEKI 821
>BC104964-1|AAI04965.1| 1453|Homo sapiens CD163 molecule-like 1
protein.
Length = 1453
Score = 29.9 bits (64), Expect = 7.4
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 156 DIKKTVILCQQLEKCGVTFLTSMEEHCTKSSGPVDINGL 194
D+ ++CQ+L CGV F ++ H + SGP+ ++ L
Sbjct: 1066 DLSDAHVVCQKLG-CGVAFNATVSAHFGEGSGPIWLDDL 1103
>BC104962-1|AAI04963.1| 1453|Homo sapiens scavenger receptor
cysteine-rich type 1 protein M160, precursor protein.
Length = 1453
Score = 29.9 bits (64), Expect = 7.4
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 156 DIKKTVILCQQLEKCGVTFLTSMEEHCTKSSGPVDINGL 194
D+ ++CQ+L CGV F ++ H + SGP+ ++ L
Sbjct: 1066 DLSDAHVVCQKLG-CGVAFNATVSAHFGEGSGPIWLDDL 1103
>AF264014-1|AAF91396.1| 1453|Homo sapiens scavenger receptor
cysteine-rich type 1 protein M160 precursor protein.
Length = 1453
Score = 29.9 bits (64), Expect = 7.4
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 156 DIKKTVILCQQLEKCGVTFLTSMEEHCTKSSGPVDINGL 194
D+ ++CQ+L CGV F ++ H + SGP+ ++ L
Sbjct: 1066 DLSDAHVVCQKLG-CGVAFNATVSAHFGEGSGPIWLDDL 1103
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.323 0.136 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,907,134
Number of Sequences: 224733
Number of extensions: 1127634
Number of successful extensions: 1617
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1580
Number of HSP's gapped (non-prelim): 25
length of query: 222
length of database: 73,234,838
effective HSP length: 87
effective length of query: 135
effective length of database: 53,683,067
effective search space: 7247214045
effective search space used: 7247214045
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)
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