Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000375-TA|BGIBMGA000375-PA|IPR001269|Dihydrouridine
synthase, DuS
(222 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p pro... 214 9e-56
AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-P... 214 9e-56
AY051946-1|AAK93370.1| 505|Drosophila melanogaster LD42056p pro... 123 2e-28
AE014134-67|AAN10512.1| 505|Drosophila melanogaster CG3645-PB, ... 123 2e-28
AE014134-66|AAF51525.2| 505|Drosophila melanogaster CG3645-PA, ... 123 2e-28
AY069835-1|AAL39980.1| 460|Drosophila melanogaster SD08006p pro... 73 2e-13
AE014298-2018|AAF48360.2| 473|Drosophila melanogaster CG1434-PA... 73 2e-13
AY119278-1|AAM51138.1| 604|Drosophila melanogaster SD26982p pro... 44 1e-04
AE014134-3157|AAF53841.1| 604|Drosophila melanogaster CG10463-P... 44 1e-04
>AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p
protein.
Length = 396
Score = 214 bits (522), Expect = 9e-56
Identities = 103/217 (47%), Positives = 146/217 (67%), Gaps = 7/217 (3%)
Query: 6 DIMEKFADAKINKTYLKVCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARA 65
DI FA+A+ + +++V APMVRYSK+ FR LVR L FTPM+++DS + KAR
Sbjct: 11 DIAAMFAEAQSD--FVRVSAPMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQ 68
Query: 66 NEFMTTTTDFPVIAQFAANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLS 125
NEF T D P+IAQFAA + +FV +++L+YPYVDG+DLNCGCPQ WAM GYGC +L
Sbjct: 69 NEFSTGADDQPLIAQFAAKDPTEFVTSAQLIYPYVDGIDLNCGCPQSWAMAKGYGCGMLR 128
Query: 126 KPEIIYDIVKGLRNVLPNKFSISVKIRLL---NDIKKTVILCQQLEKCGVTFLT--SMEE 180
+PE+++ +V+ +R LP FS+SVK+RLL +++T+ L +QLE GVTFLT
Sbjct: 129 QPELVHQVVQEVRRTLPGDFSVSVKMRLLGGEESLQRTIDLARQLESAGVTFLTLHGRTP 188
Query: 181 HCTKSSGPVDINGLKEVREALSVPMVANGGVKHLNDA 217
S +DI + +VR++L +P++ NG V+ DA
Sbjct: 189 AQKHSKDTLDIPAMSQVRQSLQIPLIVNGNVESYRDA 225
>AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-PA
protein.
Length = 396
Score = 214 bits (522), Expect = 9e-56
Identities = 103/217 (47%), Positives = 146/217 (67%), Gaps = 7/217 (3%)
Query: 6 DIMEKFADAKINKTYLKVCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARA 65
DI FA+A+ + +++V APMVRYSK+ FR LVR L FTPM+++DS + KAR
Sbjct: 11 DIAAMFAEAQSD--FVRVSAPMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQ 68
Query: 66 NEFMTTTTDFPVIAQFAANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLS 125
NEF T D P+IAQFAA + +FV +++L+YPYVDG+DLNCGCPQ WAM GYGC +L
Sbjct: 69 NEFSTGADDQPLIAQFAAKDPTEFVTSAQLIYPYVDGIDLNCGCPQSWAMAKGYGCGMLR 128
Query: 126 KPEIIYDIVKGLRNVLPNKFSISVKIRLL---NDIKKTVILCQQLEKCGVTFLT--SMEE 180
+PE+++ +V+ +R LP FS+SVK+RLL +++T+ L +QLE GVTFLT
Sbjct: 129 QPELVHQVVQEVRRTLPGDFSVSVKMRLLGGEESLQRTIDLARQLESAGVTFLTLHGRTP 188
Query: 181 HCTKSSGPVDINGLKEVREALSVPMVANGGVKHLNDA 217
S +DI + +VR++L +P++ NG V+ DA
Sbjct: 189 AQKHSKDTLDIPAMSQVRQSLQIPLIVNGNVESYRDA 225
>AY051946-1|AAK93370.1| 505|Drosophila melanogaster LD42056p
protein.
Length = 505
Score = 123 bits (297), Expect = 2e-28
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 5/197 (2%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQFA 82
V APMV S++ +R L R + A+LC++PM A+ F + K R + T D P+I QF
Sbjct: 31 VVAPMVDQSELAWRMLCRRYGAELCYSPMYHANLFATDPKYRKDALQTCPEDRPLIIQFC 90
Query: 83 ANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNVLP 142
N+ +DA+ L + D VD+N GCPQ A + YG L + E++ +IV L L
Sbjct: 91 GNDAQQILDAALLAQDHCDAVDINLGCPQAIAKRGHYGSFLQDEWELLTEIVSTLHAKL- 149
Query: 143 NKFSISVKIRLLNDIKKTVILCQQLEKCGVTFLT---SMEEHCTKSSGPVDINGLKEVRE 199
++ KIR+ D++KT+ + LE G LT E +G + N +K VR+
Sbjct: 150 -AVPVTCKIRIFEDLEKTIRYAKMLEAAGCQLLTVHGRTREQKGPLTGVANWNYIKNVRQ 208
Query: 200 ALSVPMVANGGVKHLND 216
+ +PM+ANG + L+D
Sbjct: 209 HIKIPMLANGNILALDD 225
>AE014134-67|AAN10512.1| 505|Drosophila melanogaster CG3645-PB,
isoform B protein.
Length = 505
Score = 123 bits (297), Expect = 2e-28
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 5/197 (2%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQFA 82
V APMV S++ +R L R + A+LC++PM A+ F + K R + T D P+I QF
Sbjct: 31 VVAPMVDQSELAWRMLCRRYGAELCYSPMYHANLFATDPKYRKDALQTCPEDRPLIIQFC 90
Query: 83 ANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNVLP 142
N+ +DA+ L + D VD+N GCPQ A + YG L + E++ +IV L L
Sbjct: 91 GNDAQQILDAALLAQDHCDAVDINLGCPQAIAKRGHYGSFLQDEWELLTEIVSTLHAKL- 149
Query: 143 NKFSISVKIRLLNDIKKTVILCQQLEKCGVTFLT---SMEEHCTKSSGPVDINGLKEVRE 199
++ KIR+ D++KT+ + LE G LT E +G + N +K VR+
Sbjct: 150 -AVPVTCKIRIFEDLEKTIRYAKMLEAAGCQLLTVHGRTREQKGPLTGVANWNYIKNVRQ 208
Query: 200 ALSVPMVANGGVKHLND 216
+ +PM+ANG + L+D
Sbjct: 209 HIKIPMLANGNILALDD 225
>AE014134-66|AAF51525.2| 505|Drosophila melanogaster CG3645-PA,
isoform A protein.
Length = 505
Score = 123 bits (297), Expect = 2e-28
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 5/197 (2%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQFA 82
V APMV S++ +R L R + A+LC++PM A+ F + K R + T D P+I QF
Sbjct: 31 VVAPMVDQSELAWRMLCRRYGAELCYSPMYHANLFATDPKYRKDALQTCPEDRPLIIQFC 90
Query: 83 ANNRDDFVDASKLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNVLP 142
N+ +DA+ L + D VD+N GCPQ A + YG L + E++ +IV L L
Sbjct: 91 GNDAQQILDAALLAQDHCDAVDINLGCPQAIAKRGHYGSFLQDEWELLTEIVSTLHAKL- 149
Query: 143 NKFSISVKIRLLNDIKKTVILCQQLEKCGVTFLT---SMEEHCTKSSGPVDINGLKEVRE 199
++ KIR+ D++KT+ + LE G LT E +G + N +K VR+
Sbjct: 150 -AVPVTCKIRIFEDLEKTIRYAKMLEAAGCQLLTVHGRTREQKGPLTGVANWNYIKNVRQ 208
Query: 200 ALSVPMVANGGVKHLND 216
+ +PM+ANG + L+D
Sbjct: 209 HIKIPMLANGNILALDD 225
>AY069835-1|AAL39980.1| 460|Drosophila melanogaster SD08006p
protein.
Length = 460
Score = 73.3 bits (172), Expect = 2e-13
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTT-----TDFPV 77
+ APMVR + R L AD+ +T L D S R N + T +D +
Sbjct: 14 ILAPMVRVGTLPMRLLALEMGADIVYTEE-LVDIKLIKSIRRPNPALGTVDFVDPSDGTI 72
Query: 78 IAQFAANNRDDFV------DAS------KLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLS 125
+ + A V DA KL+ + G+D+N GCP+++++K G G +LL+
Sbjct: 73 VFRTCAQETSRLVLQMGTSDAGRALAVGKLLQRDISGLDINMGCPKEFSIKGGMGAALLA 132
Query: 126 KPEIIYDIVKGLRNVLPNKFSISVKIRLLNDIKKTVILCQQLEKCGVTFL-TSMEEHCTK 184
P+ I++ L + L ++ KIR+L D++ T+ L Q+L G+ + +
Sbjct: 133 DPDKAAHILRTLCSGL--DIPVTCKIRILPDVEGTIDLVQKLAATGIAAIGIHARTRDER 190
Query: 185 SSGPVDINGLKEVREALSVPMVANGGVKHLN 215
P L+ V +A+ +P++ANGG K+++
Sbjct: 191 PQHPAHPEVLRAVAQAVDIPIIANGGSKNMH 221
>AE014298-2018|AAF48360.2| 473|Drosophila melanogaster CG1434-PA
protein.
Length = 473
Score = 73.3 bits (172), Expect = 2e-13
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTT-----TDFPV 77
+ APMVR + R L AD+ +T L D S R N + T +D +
Sbjct: 27 ILAPMVRVGTLPMRLLALEMGADIVYTEE-LVDIKLIKSIRRPNPALGTVDFVDPSDGTI 85
Query: 78 IAQFAANNRDDFV------DAS------KLVYPYVDGVDLNCGCPQKWAMKDGYGCSLLS 125
+ + A V DA KL+ + G+D+N GCP+++++K G G +LL+
Sbjct: 86 VFRTCAQETSRLVLQMGTSDAGRALAVGKLLQRDISGLDINMGCPKEFSIKGGMGAALLA 145
Query: 126 KPEIIYDIVKGLRNVLPNKFSISVKIRLLNDIKKTVILCQQLEKCGVTFL-TSMEEHCTK 184
P+ I++ L + L ++ KIR+L D++ T+ L Q+L G+ + +
Sbjct: 146 DPDKAAHILRTLCSGL--DIPVTCKIRILPDVEGTIDLVQKLAATGIAAIGIHARTRDER 203
Query: 185 SSGPVDINGLKEVREALSVPMVANGGVKHLN 215
P L+ V +A+ +P++ANGG K+++
Sbjct: 204 PQHPAHPEVLRAVAQAVDIPIIANGGSKNMH 234
>AY119278-1|AAM51138.1| 604|Drosophila melanogaster SD26982p
protein.
Length = 604
Score = 44.4 bits (100), Expect = 1e-04
Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQFA 82
V +P+ + FR + + F AD+ M A + ++ Q
Sbjct: 260 VLSPLTTLGNLPFRRICKEFGADITCGEMACAQPLLKGMGQEWALTKRHQSEDVFGVQLC 319
Query: 83 ANNRDDFVDASKLVYP--YVDGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNV 140
NN + A+++++ VD +DLN GCP + G G +L+ + I+ V+
Sbjct: 320 GNNPNMLNQAAQVIHETAQVDFIDLNIGCPIDLIYQQGGGSALMRRTNILELTVRSCA-A 378
Query: 141 LPNKFSISVKIRLLNDIKKTVI--LCQQLEKCGVTFLT----SMEEHCTKSSGPVDINGL 194
L ++ +VK+R K+V L +E+ G + +T S E+ TK + I
Sbjct: 379 LSDRLPFTVKMRTGIYADKSVAHELLPLVEEWGASAVTLHGRSREQRYTKHANWAYIE-- 436
Query: 195 KEVREALSVPMVANGGVKHLND 216
+ +A +P++ NG + D
Sbjct: 437 ECAAKAKRMPVIGNGDILSYED 458
>AE014134-3157|AAF53841.1| 604|Drosophila melanogaster CG10463-PA
protein.
Length = 604
Score = 44.4 bits (100), Expect = 1e-04
Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 23 VCAPMVRYSKVHFRTLVRNFNADLCFTPMILADSFCQNSKARANEFMTTTTDFPVIAQFA 82
V +P+ + FR + + F AD+ M A + ++ Q
Sbjct: 260 VLSPLTTLGNLPFRRICKEFGADITCGEMACAQPLLKGMGQEWALTKRHQSEDVFGVQLC 319
Query: 83 ANNRDDFVDASKLVYP--YVDGVDLNCGCPQKWAMKDGYGCSLLSKPEIIYDIVKGLRNV 140
NN + A+++++ VD +DLN GCP + G G +L+ + I+ V+
Sbjct: 320 GNNPNMLNQAAQVIHETAQVDFIDLNIGCPIDLIYQQGGGSALMRRTNILELTVRSCA-A 378
Query: 141 LPNKFSISVKIRLLNDIKKTVI--LCQQLEKCGVTFLT----SMEEHCTKSSGPVDINGL 194
L ++ +VK+R K+V L +E+ G + +T S E+ TK + I
Sbjct: 379 LSDRLPFTVKMRTGIYADKSVAHELLPLVEEWGASAVTLHGRSREQRYTKHANWAYIE-- 436
Query: 195 KEVREALSVPMVANGGVKHLND 216
+ +A +P++ NG + D
Sbjct: 437 ECAAKAKCMPVIGNGDILSYED 458
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.323 0.136 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,555,653
Number of Sequences: 52641
Number of extensions: 411637
Number of successful extensions: 622
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 599
Number of HSP's gapped (non-prelim): 11
length of query: 222
length of database: 24,830,863
effective HSP length: 82
effective length of query: 140
effective length of database: 20,514,301
effective search space: 2872002140
effective search space used: 2872002140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
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