Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000374-TA|BGIBMGA000374-PA|IPR003653|Peptidase C48,
SUMO/Sentrin/Ubl1, IPR009792|Protein of unknown function DUF1358
(674 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1047 + 25666113-25666442,25666606-25666651,25667042-256671... 69 1e-11
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 51 3e-06
01_03_0259 - 14312197-14312259,14312384-14312456,14312651-143127... 50 5e-06
03_04_0037 + 16694760-16695227,16695563-16695642,16695735-166958... 50 6e-06
05_02_0100 + 6594787-6594878,6595443-6595728,6595809-6595887,659... 49 1e-05
03_02_0969 - 12795413-12795475,12795672-12795744,12796011-127961... 48 2e-05
01_06_0641 - 30782235-30782423,30782498-30782605,30782848-307829... 44 3e-04
11_01_0712 - 5844291-5844474,5844722-5844777,5844861-5844959,584... 33 0.74
08_02_1240 + 25504789-25504794,25505421-25505555,25505854-255059... 31 2.3
08_02_0747 - 20728073-20728081,20728167-20728353,20728810-207289... 31 2.3
04_03_0832 + 20139299-20139520,20139822-20141114,20142697-201428... 31 3.0
04_04_1312 + 32565447-32565585,32566008-32566060,32566139-325667... 30 5.2
04_04_1311 - 32559549-32559674,32559761-32560078,32560158-325602... 30 5.2
02_02_0348 - 9233032-9233154,9233233-9233311,9233387-9233511,923... 30 5.2
10_08_0448 + 18015609-18016052,18017147-18017248,18017332-180174... 30 6.9
>12_02_1047 +
25666113-25666442,25666606-25666651,25667042-25667130,
25667291-25667493,25667807-25667949,25668286-25668332,
25668794-25668870,25668952-25668981,25669068-25669163,
25669489-25669591,25669959-25670041,25670204-25670326,
25670465-25670576,25670791-25670898,25671006-25671593
Length = 725
Score = 68.9 bits (161), Expect = 1e-11
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 21/132 (15%)
Query: 105 QILIYPPGKG---GIPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQ-REKTHIF 160
+ +IY P + + +++ D CL +L+ +I+FY++Y+ L + REK +IF
Sbjct: 314 ETMIYYPSRDDPEAVELSSSDIKCLDPGVYLSSPVINFYIQYMKRTKLHDDDCREKFYIF 373
Query: 161 STFFYKRLTTKPSKFNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVVVPINEN 220
+T+FY +L + + K ++R W K VNI+ Y+++PI+
Sbjct: 374 NTYFYSKL--EEALLGKGE---------------FLKLRRWWKGVNIYHTSYIILPIHGT 416
Query: 221 CHWFVAIICFPS 232
HW + IICFPS
Sbjct: 417 AHWSLIIICFPS 428
Score = 50.8 bits (116), Expect = 3e-06
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 322 CCSKNEPIKQPCILIFDSLAGASRSRVVATLRDYLTCEY-HVKVSP---LKIFNK----- 372
C E P IL DSL S +++ T+R YL E+ H++ +P + I
Sbjct: 425 CFPSKESNSGPIILHLDSLELHSSAKIFDTVRRYLEAEWCHLRKNPPPDISISETIWDDL 484
Query: 373 -DNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQL--TNWFDEIVVTRK 429
NI+ +++PQQ N DCG+++L Y+E+F + +T + +WF +
Sbjct: 485 PSNIQKEKVQVPQQKNEYDCGIFMLYYIERFIRLAPERFTRDNLSMFSRSWFQPEDASDL 544
Query: 430 REEISNLLKSLMNKYNPDSHLTLPD 454
R+ I LL D L+ D
Sbjct: 545 RQRIRELLLEEFESARLDEALSEAD 569
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 51.2 bits (117), Expect = 3e-06
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 116 IPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDV-LTHNQREKTHIFSTFFYKRLTTKPSK 174
I ++ D CL + L+ I++FY+ YL+ + T K HIF+T+F+ +L SK
Sbjct: 210 IELSYSDMKCLEPESLLSSPILNFYIMYLMGQMPSTSRLGGKYHIFNTYFFSKLEALTSK 269
Query: 175 FNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVVVPIN 218
+ + + NL R W K V+IF+K Y+++P++
Sbjct: 270 VDNDA----YFLNL----------RRWWKGVDIFKKAYIIIPVH 299
Score = 39.1 bits (87), Expect = 0.011
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 378 SC-LKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQLTN-----WFDEIVVTRKRE 431
SC +++PQQ+N DCG+++L Y+ +F ++ L K +N WF + R+
Sbjct: 349 SCTVQVPQQDNEYDCGVFVLYYMRRFIEE--APERLNNKDSSNMFGEGWFQREEASALRK 406
Query: 432 EISNLLKSLMNKYNPDSHLTLP 453
E+ LL L + ++H+ P
Sbjct: 407 EMQALLLRLFEEAKDNNHMRDP 428
>01_03_0259 -
14312197-14312259,14312384-14312456,14312651-14312754,
14313073-14313192,14313278-14313364,14313925-14314023,
14314110-14314203,14314298-14314368,14315258-14316040
Length = 497
Score = 50.4 bits (115), Expect = 5e-06
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 116 IPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTH-NQREKTHIFSTFFYKRLTTKPSK 174
I I E CL + ++LND +I+ YL+ L L N+ K H F+TFFYK+L T
Sbjct: 297 IVITRETLQCLNETEWLNDEVINLYLELLKERELREPNKFLKCHFFNTFFYKKLITGGYD 356
Query: 175 FNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVVVPINENCHWFVAII 228
+ + W + KR ++ E D + VPI++ HW +A+I
Sbjct: 357 Y---KSVRRWTT------KRKL-------GYSLLECDKIFVPIHKEVHWCLAVI 394
Score = 30.7 bits (66), Expect = 4.0
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 338 DSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLK-IPQQNNFTDCGLYLL 396
DSL G+ + + TL YL E VK + + + K +K +P Q N DCG+++L
Sbjct: 405 DSL-GSMDMKALRTLARYLVDE--VKDKSGQHIDALSWKQEGVKNLPLQENGWDCGMFML 461
Query: 397 QYVEQFFKD 405
+Y++ + +D
Sbjct: 462 KYIDFYSRD 470
>03_04_0037 +
16694760-16695227,16695563-16695642,16695735-16695828,
16695973-16696071,16696650-16696742,16696822-16696941,
16697422-16697525,16697734-16697806,16698023-16698085
Length = 397
Score = 50.0 bits (114), Expect = 6e-06
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 23/132 (17%)
Query: 102 DIKQILIYPPGKGGIPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQR-EKTHIF 160
D + +I G I I E CL +LND +I+ YL+ L +R K H F
Sbjct: 181 DQSKKIIVMHGPSNIDITKEKIWCLRTCNWLNDEVINLYLELLKERAQREPKRFLKCHFF 240
Query: 161 STFFYKRLTTKPSKFNKSSNPHEWDSNLTPAQKRHARVRTWTK----NVNIFEKDYVVVP 216
+TFFYK+L + ++ S VR WT + E + + +P
Sbjct: 241 NTFFYKKLACGKTGYDYQS------------------VRRWTTLNRLGYGLVECEKIFIP 282
Query: 217 INENCHWFVAII 228
I+ N HW +AII
Sbjct: 283 IHRNVHWCLAII 294
Score = 30.3 bits (65), Expect = 5.2
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 329 IKQPCILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQQNNF 388
+K DS G + V+ L Y+ E + K S +++ +K S P Q N
Sbjct: 296 MKDKTFQYLDSFGGMDHA-VLRILARYIRDELNDK-SNIQVDTSSWLKISSDSCPLQQNG 353
Query: 389 TDCGLYLLQYVE 400
DCG+++L++++
Sbjct: 354 WDCGMFMLKFID 365
>05_02_0100 +
6594787-6594878,6595443-6595728,6595809-6595887,
6595964-6596013,6597281-6597478,6597555-6597612,
6598388-6598496,6599253-6599321,6599684-6599812,
6599970-6600082,6600386-6600479,6602827-6602917,
6604145-6604233,6604715-6604856,6605849-6606196,
6606314-6607408
Length = 1013
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 98 SNTPDIKQILIYPPGK-GGIPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQREK 156
S+T + + + IYP G + I+ D L + F+ND IIDFY+K+L + ++ +
Sbjct: 313 SDTEEFEDV-IYPKGDHDAVSISKRDVELLLPETFVNDTIIDFYVKHL-STRIEPAEKHR 370
Query: 157 THIFSTFFYKRLTTKPSKFNKSSNPHEWDSNLT 189
H F++FF+++L ++ P + D+N++
Sbjct: 371 YHFFNSFFFRKLADLDK--DQGRAPEDGDTNIS 401
Score = 45.2 bits (102), Expect = 2e-04
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 380 LKIPQQNNFTDCGLYLLQYVEQFFKD-PITDYTLPIKQLTN-----WFDEIVVTRKREEI 433
+++PQQ+N DCGL+LL YVE F D P + L I N WF + KR I
Sbjct: 492 VQLPQQDNSFDCGLFLLHYVELFLMDTPRSFNPLKIDSFANYLSDDWFPPAEASLKRSLI 551
Query: 434 SNLLKSLMNKYNPD 447
L+ L+ + + D
Sbjct: 552 RKLIHKLLKEPSQD 565
>03_02_0969 -
12795413-12795475,12795672-12795744,12796011-12796114,
12796374-12796493,12796591-12796683,12797813-12797911,
12798074-12798167,12798254-12798333,12798817-12799347
Length = 418
Score = 48.0 bits (109), Expect = 2e-05
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 116 IPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQR-EKTHIFSTFFYKRLTTKPSK 174
I ++ E + CL +LND +I+ YL+ L +R K H F+TFFYK+L
Sbjct: 216 IEVSREKFRCLRLTAWLNDEVINLYLELLKEREAREPKRFLKCHFFNTFFYKKLAC---- 271
Query: 175 FNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVVVPINENCHWFVAII 228
N +++ S KR R + E D + VP++++ HW +A+I
Sbjct: 272 ---GKNGYDYKS-----VKRWTTRR--RLGYELIECDKIFVPVHKDVHWCLAVI 315
>01_06_0641 -
30782235-30782423,30782498-30782605,30782848-30782959,
30783429-30783526,30784249-30784336,30784780-30784875,
30785101-30785171,30786003-30786075,30787023-30787324,
30787418-30787503,30788024-30788084,30789386-30789688
Length = 528
Score = 44.4 bits (100), Expect = 3e-04
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 122 DYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQREKTHIFSTFFYKRLTTKPSKFNKSSNP 181
D CL +++L +I+FY++YL + +IF+T+FY +L S+
Sbjct: 311 DIECLEPEEYLKSPVINFYMQYLRKSRTCGD----LYIFNTYFYSKLEEVLSRMGD---- 362
Query: 182 HEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVVVPIN 218
H+ DS + ++R W K+++IF + Y+++PI+
Sbjct: 363 HD-DSQFS-------KLRRWWKHIDIFRQPYIILPIH 391
Score = 37.1 bits (82), Expect = 0.045
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 374 NIKGSCLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQL--TNWFDEIVVTRKRE 431
NI +++P Q N DCG+++L Y+E+F ++ T + WFD + R+
Sbjct: 423 NINKEKVQVPSQRNKYDCGIFMLHYIERFIQEAPERLTRENLCMFGRKWFDPKETSGLRD 482
Query: 432 EISNLL 437
I L+
Sbjct: 483 RIRALM 488
>11_01_0712 -
5844291-5844474,5844722-5844777,5844861-5844959,
5845056-5845137,5845626-5845760,5845844-5846011,
5846127-5846310,5848114-5848189
Length = 327
Score = 33.1 bits (72), Expect = 0.74
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 330 KQPCILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQ--QNN 387
K P +L+ DSL + +R+ + ++ ++ + + + N+ I CL+ P+ Q N
Sbjct: 164 KGPRMLLLDSLKTTNPTRLRSNIKRFIADIFKTEE---REENEQFINKICLEFPEVPQQN 220
Query: 388 FTDCGLYLLQYVEQFFKD 405
+CG+Y+L ++ F ++
Sbjct: 221 GDECGIYVLYFIYCFLQN 238
Score = 30.7 bits (66), Expect = 4.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 196 ARVRTWTKNVNIFEKDYVVVPINENCHWFVAIIC 229
+ V W K +F + YV VPI HW + ++C
Sbjct: 119 SNVLKWIKAKKVFSRQYVFVPIVIWGHWNLLVLC 152
>08_02_1240 +
25504789-25504794,25505421-25505555,25505854-25505964,
25506091-25506183,25506264-25506884,25506970-25507143,
25507239-25507464,25507560-25507651,25507744-25507842,
25507936-25507984,25508071-25508124,25508312-25508484,
25508561-25508632,25508713-25508808,25509032-25509048,
25509704-25509875,25509973-25510071,25510381-25510484,
25510940-25511126,25511212-25511220
Length = 862
Score = 31.5 bits (68), Expect = 2.3
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 382 IPQQNNFTDCGLYLLQYVE 400
+P+QNN DCG++ L+Y+E
Sbjct: 792 VPRQNNLFDCGVFTLKYME 810
>08_02_0747 -
20728073-20728081,20728167-20728353,20728810-20728913,
20729008-20729139,20729583-20729810,20730263-20730358,
20730440-20730511,20730588-20730760,20730947-20731000,
20731086-20731134,20731228-20731326,20731420-20731511,
20731607-20731832,20731927-20732100,20732186-20732809,
20732890-20733033,20733108-20733218,20733516-20733650,
20733963-20733989
Length = 911
Score = 31.5 bits (68), Expect = 2.3
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 382 IPQQNNFTDCGLYLLQYVE 400
+P+QNN DCG++ L+Y+E
Sbjct: 841 VPRQNNLFDCGVFTLKYME 859
>04_03_0832 +
20139299-20139520,20139822-20141114,20142697-20142822,
20143322-20143442,20144213-20144481
Length = 676
Score = 31.1 bits (67), Expect = 3.0
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 485 KKSEKDLETATLTFVKQIPSELVKRSFGDPSDGTIVRKTIRIASDIENRSLVQMK-PELI 543
++ E+D + TL V Q +V+R+ GD D + R + SL+ + +
Sbjct: 214 EEDEEDEDRCTLAGVLQPEDAVVERALGDAPDTELTRLAADYLRSTHHASLLCLSLRRAL 273
Query: 544 KKAGAFLASVTGISALIGFSATLS 567
++A A +T + ALI + L+
Sbjct: 274 RRARALYGPITDLLALIPHAPPLA 297
>04_04_1312 +
32565447-32565585,32566008-32566060,32566139-32566771,
32566844-32566972,32567052-32567144,32567220-32567336,
32567412-32567512,32567603-32567870,32568236-32568265,
32568361-32568572,32568650-32568731,32568804-32569555,
32569640-32569811,32570412-32570498,32570578-32570895,
32570982-32571107
Length = 1103
Score = 30.3 bits (65), Expect = 5.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 330 KQPCILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQQNNFT 389
K+ I I DSL SR V+ + + L K+ I I L + +Q N
Sbjct: 540 KKDTIYILDSLPCKSREAVICGILETLQ-----KLGKESIAGSQYIC-EVLDVQRQGNNY 593
Query: 390 DCGLYLLQYVEQF 402
DCG ++L Y+++F
Sbjct: 594 DCGFHVLLYIKEF 606
>04_04_1311 -
32559549-32559674,32559761-32560078,32560158-32560244,
32560845-32561016,32561101-32561852,32561925-32562006,
32562084-32562295,32562391-32562420,32562786-32563074,
32563143-32563243,32563319-32563435,32563511-32563603,
32563683-32563811,32563884-32564516,32564765-32564844,
32565152-32565164
Length = 1077
Score = 30.3 bits (65), Expect = 5.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 330 KQPCILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQQNNFT 389
K+ I I DSL SR V+ + + L K+ I I L + +Q N
Sbjct: 514 KKDTIYILDSLPCKSREAVICGILETLQ-----KLGKESIAGSQYIC-EVLDVQRQGNNY 567
Query: 390 DCGLYLLQYVEQF 402
DCG ++L Y+++F
Sbjct: 568 DCGFHVLLYIKEF 580
>02_02_0348 -
9233032-9233154,9233233-9233311,9233387-9233511,
9233597-9233734,9233802-9233993,9235269-9237209
Length = 865
Score = 30.3 bits (65), Expect = 5.2
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 12/66 (18%)
Query: 380 LKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQLTNWFDEI--VVTRKREEISNLL 437
+K+PQQ++ CGL+ L++++ + K+L+ F+E+ T K + +NL+
Sbjct: 791 MKVPQQSDSWSCGLHTLKFIQHWNG----------KELSPEFNEMDTTTTFKHKVAANLI 840
Query: 438 KSLMNK 443
S MN+
Sbjct: 841 NSTMNE 846
>10_08_0448 +
18015609-18016052,18017147-18017248,18017332-18017475,
18017555-18017705,18017793-18017820,18018456-18018621,
18018701-18018764,18019320-18019423,18019572-18019710,
18020114-18020232,18020333-18020485,18020565-18020654,
18020952-18021029,18021671-18021829,18021914-18022117,
18022209-18022414,18022495-18022630,18022859-18022898,
18023329-18023408,18023569-18024228
Length = 1088
Score = 29.9 bits (64), Expect = 6.9
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 447 DSHLTLPDITFPTLNGKLIESEDNEECLEGERGNQNSIKKSEKDLETATLTFVKQ 501
D T P+ T T KL + +N C GERG +++ ++ T F+++
Sbjct: 604 DEESTFPNATDLTFANKLKQHLNNNSCFRGERGKAFAVRHYAGEVAYDTSGFLEK 658
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,241,600
Number of Sequences: 37544
Number of extensions: 734603
Number of successful extensions: 1793
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1760
Number of HSP's gapped (non-prelim): 31
length of query: 674
length of database: 14,793,348
effective HSP length: 87
effective length of query: 587
effective length of database: 11,527,020
effective search space: 6766360740
effective search space used: 6766360740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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