Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000374-TA|BGIBMGA000374-PA|IPR003653|Peptidase C48,
SUMO/Sentrin/Ubl1, IPR009792|Protein of unknown function DUF1358
(674 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27468| Best HMM Match : Peptidase_C48 (HMM E-Value=0.0026) 133 5e-31
SB_48563| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 3e-06
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.32
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.43
SB_19875| Best HMM Match : zf-ZPR1 (HMM E-Value=1.7) 33 0.99
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.3
SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.3
SB_15600| Best HMM Match : Peptidase_C48 (HMM E-Value=0.96) 32 1.3
SB_15511| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.7
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.0
SB_38097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.3
SB_42331| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-07) 30 7.0
SB_34025| Best HMM Match : Homeobox (HMM E-Value=1.1e-35) 29 9.2
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 29 9.2
>SB_27468| Best HMM Match : Peptidase_C48 (HMM E-Value=0.0026)
Length = 766
Score = 133 bits (321), Expect = 5e-31
Identities = 69/160 (43%), Positives = 100/160 (62%), Gaps = 15/160 (9%)
Query: 73 CPKESNNVTKMATRSLSASSVGVRCSNTPDIKQILIYPPG--KGGIPINTEDYMCLAQDQ 130
C + ++ TRS S+ + N P + +L+YPP +GGI I T + CL + +
Sbjct: 599 CNSGEPSASRYNTRSNDTSA---KQKNKPPPENLLVYPPPPQQGGINITTANLDCLQEGE 655
Query: 131 FLNDVIIDFYLKYLVHDVLTHNQREKTHIFSTFFYKRLTTKPSKFNKSSNPHEWDSNLTP 190
FLNDVIIDFYLKY+ H+ LT RE+THIFS+FFYKRLT + S ++NL+
Sbjct: 656 FLNDVIIDFYLKYIFHEKLTDFDRERTHIFSSFFYKRLTQRASS----------ETNLSV 705
Query: 191 AQKRHARVRTWTKNVNIFEKDYVVVPINENCHWFVAIICF 230
++ H++V+TWTK V+IF+KD++VVPINE + C+
Sbjct: 706 IERMHSQVKTWTKYVDIFQKDFIVVPINERLVGLSNVACY 745
>SB_48563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 51.2 bits (117), Expect = 3e-06
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 355 YLTCEYHVKVSPLKI--FNKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFK 404
YL E++ K S K F+K+ KG K+P+Q+N DCG++LLQYVE FF+
Sbjct: 2 YLMHEWNHKKSEGKKRDFSKETFKGGFPKVPEQDNHCDCGVFLLQYVESFFE 53
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 34.3 bits (75), Expect = 0.32
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 461 NGKLIESEDNEECLEGERGNQNSIKKSEKDLETATLTFVKQIPSELVKRSFGDPS----D 516
N K IE E LE + N+NS++KS+KDLE T + ++ + ++ GD +
Sbjct: 1126 NSKQIEELTIE--LESTKKNKNSLEKSKKDLENETSSLTIELKAISQEKQEGDRKIKMLE 1183
Query: 517 GTIVRKTIRIASDIENRSLVQMKPELIKKAGAFLASVTGISALIGFSATLSTAKKS 572
+ IR+A D + S + + ++K ++ + +L L +KKS
Sbjct: 1184 NQMSEANIRLADDEQKVSELTISRNQLQK--DLEVQISMVESLESKHTALERSKKS 1237
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 33.9 bits (74), Expect = 0.43
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 38 PEIITEEAKVALNTLFGKVTDELNSREANDILVRTCPKESNNVTKMAT 85
P + EE K+ NT G+ TDE+ + +A DI+V+ P E+ V + T
Sbjct: 1294 PRVELEEGKLCNNTDIGRDTDEVLTIKACDIIVQERPFENRKVEQEKT 1341
>SB_19875| Best HMM Match : zf-ZPR1 (HMM E-Value=1.7)
Length = 323
Score = 32.7 bits (71), Expect = 0.99
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 431 EEISNLLKSLMNKYNPDSHLTLPDITFPTLNGKLIESEDNEECL---EGER-GNQNSIKK 486
EE++NL + ++ N D T D+ T+N IE+ E+ L ER QNS+ K
Sbjct: 127 EEVANLHRQVLQSDNGDDVFTEEDVEEQTVNAGKIETTIREKILALEAAERTSRQNSVAK 186
Query: 487 SEKDLETATLTFVKQIPSE 505
K + V+ + SE
Sbjct: 187 KIKRAHINEMMKVRGVTSE 205
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 32.3 bits (70), Expect = 1.3
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 412 LPIKQLTNWFDEIVVTRKREEISNLLKSLMNKYNPDS---HLTLPDITFPTLNGKLIESE 468
+P+ +NW E V T +E L+ SL + N + H L D +P+L KL E E
Sbjct: 216 VPLALTSNW--ETVCT-SADEWQALISSLEDSSNAEETKLHQYLKDELYPSLIDKLQEHE 272
Query: 469 DNEECLEGERGNQNSIKKSEK 489
+E L+G+R + + EK
Sbjct: 273 KEKE-LKGKRKKSKTSRSPEK 292
>SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 116 IPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQREKTHIFSTFFYKRL 168
+ I D L+ +LND +I+FY + K H F++FFY +L
Sbjct: 301 LTITRGDLATLSNLNWLNDEVINFYFNMIAARSKEDPVFPKVHFFNSFFYPKL 353
>SB_15600| Best HMM Match : Peptidase_C48 (HMM E-Value=0.96)
Length = 172
Score = 32.3 bits (70), Expect = 1.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 204 NVNIFEKDYVVVPINENCHWFVAII 228
N +IF KD V+PIN HW + I+
Sbjct: 91 NKDIFSKDMWVIPINTGMHWSILIV 115
>SB_15511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 196 ARVRTWTKNVNIFEKDYVVVPINENCHWFVAIICFPSLDGCRSMLDNRTVT 246
A+ T + +I E+D V+VP N HW + ++ PS + +LDN T
Sbjct: 569 AKTLASTLSFSILEQDAVIVPCNAAQHWTLLVVLPPSNE--MFVLDNMATT 617
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 30.7 bits (66), Expect = 4.0
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 14 MVENEGPYYDPMSKTDPYRRITLLPEIITEEAKVALNTLFGKVTDELNSREANDILVRTC 73
+V NE ++T P I P + +E +L + E + E +++L+RT
Sbjct: 942 LVSNETETDLYANETAPQYVIMTQPLLFAKEGNSSLASKSTIAEQERGAGEHSEVLLRTT 1001
Query: 74 PKES-NNVTKMATRSLSASSVGVRCSNTPDI 103
KE+ T TR L SSV ++ T ++
Sbjct: 1002 QKETVLYSTDSETRDLQTSSVNIQPQKTAEV 1032
>SB_38097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1099
Score = 30.3 bits (65), Expect = 5.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 45 AKVALNTLFGKVTDELNSREANDILV 70
+K+ALN ++GK + +N+ E ND+L+
Sbjct: 885 SKMALNCMWGKFGEHVNTIEVNDVLI 910
>SB_42331| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-07)
Length = 403
Score = 29.9 bits (64), Expect = 7.0
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 550 LASVTGISALIGFSATLSTAKKSDPK--YFSKG--LHGGAELGDAGAILALRAL-GWGTL 604
L S+T +SA+ F L+ K + Y +KG + A L + +L L GWG
Sbjct: 205 LVSITHLSAM-AFEKYLTLFKSTSTNGYYLTKGQAVKIIAALWGYSLVFSLSPLVGWGA- 262
Query: 605 YAVAGTGFLCYGIWKLSGAKD 625
Y + C +W SGAKD
Sbjct: 263 YGLGPENITCTLLWGASGAKD 283
>SB_34025| Best HMM Match : Homeobox (HMM E-Value=1.1e-35)
Length = 460
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 56 VTDELNSREANDILVRTCPKESNNVTKMATRSLSASSVGVRCS 98
+ D LN +EAN ++TC +E++N + +T++ A ++CS
Sbjct: 11 IADILNLQEANSS-IKTCAEEASNSVQESTQNDKAIGEYLKCS 52
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 29.5 bits (63), Expect = 9.2
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 480 NQNSIKKSEKDLETATLTFVKQIPSELVKRSFGDPSDGTIVRKTIRIASDIENRSLVQ 537
+++ + K +DL AT + +K+I S ++KR D +V++ +D+ R Q
Sbjct: 533 DKDKVSKQIQDLRNATQSAIKKIKSTMMKRKMIDEVYCDLVKRVNHHLADLNERQKQQ 590
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,799,699
Number of Sequences: 59808
Number of extensions: 894260
Number of successful extensions: 2510
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2493
Number of HSP's gapped (non-prelim): 20
length of query: 674
length of database: 16,821,457
effective HSP length: 87
effective length of query: 587
effective length of database: 11,618,161
effective search space: 6819860507
effective search space used: 6819860507
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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