Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000374-TA|BGIBMGA000374-PA|IPR003653|Peptidase C48,
SUMO/Sentrin/Ubl1, IPR009792|Protein of unknown function DUF1358
(674 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g33620.1 68417.m04775 Ulp1 protease family protein low simila... 99 8e-21
At1g09730.1 68414.m01092 Ulp1 protease family protein low simila... 89 7e-18
At1g10570.2 68414.m01191 Ulp1 protease family protein contains P... 79 1e-14
At1g10570.1 68414.m01190 Ulp1 protease family protein contains P... 79 1e-14
At1g60220.1 68414.m06782 Ulp1 protease family protein contains P... 73 6e-13
At4g15880.1 68417.m02413 Ulp1 protease family protein contains P... 43 8e-04
At4g00690.1 68417.m00094 Ulp1 protease family protein similar to... 42 0.001
At3g06910.1 68416.m00820 Ulp1 protease family protein similar to... 40 0.004
At3g48480.1 68416.m05292 hypothetical protein 34 0.35
At1g61360.1 68414.m06915 S-locus lectin protein kinase family pr... 31 1.9
At1g29110.1 68414.m03563 cysteine proteinase, putative contains ... 31 1.9
At5g60190.1 68418.m07545 Ulp1 protease family protein low simila... 31 3.3
At1g11280.3 68414.m01295 S-locus protein kinase, putative simila... 31 3.3
At1g11280.2 68414.m01294 S-locus protein kinase, putative simila... 31 3.3
At1g11280.1 68414.m01296 S-locus protein kinase, putative simila... 31 3.3
At5g15920.1 68418.m01862 structural maintenance of chromosomes (... 30 5.7
At4g31410.2 68417.m04457 expressed protein 30 5.7
At4g31410.1 68417.m04456 expressed protein 30 5.7
At2g27980.1 68415.m03391 expressed protein 30 5.7
>At4g33620.1 68417.m04775 Ulp1 protease family protein low
similarity to SP|Q9BQF6 SUMO-1-specific protease 2 (EC
3.4.22.-) (Sentrin-specific protease SENP7) {Homo
sapiens}; contains Pfam profile PF02902: Ulp1 protease
family, C-terminal catalytic domain
Length = 783
Score = 99.1 bits (236), Expect = 8e-21
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Query: 78 NNVTKMATRSLSASSVGVRCSNTPDIKQILIYPPGK-GGIPINTEDYMCLAQDQFLNDVI 136
+ +T+ + S +G +N D + L+YP G+ + + +D L +F+ND I
Sbjct: 266 DTITESEEIAFSGHDLGTSLTNLADSFEDLVYPQGEPDAVVVRKQDIELLKPRRFINDTI 325
Query: 137 IDFYLKYLVHDVLTHNQREKTHIFSTFFYKRLTTKPSKFNKSSNPHEWDSNLTPAQKRHA 196
IDFY+KYL + + + +R + H F+ FF+++L +N + + ++ +
Sbjct: 326 IDFYIKYLKNRI-SPKERGRFHFFNCFFFRKL----------ANLDKGTPSTCGGREAYQ 374
Query: 197 RVRTWTKNVNIFEKDYVVVPINENCHWFVAIICFP 231
RV+ WTKNV++FEKDY+ +PIN + HW + IIC P
Sbjct: 375 RVQKWTKNVDLFEKDYIFIPINCSFHWSLVIICHP 409
Score = 55.2 bits (127), Expect = 1e-07
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 328 PIKQPCILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNK--DNIKGSCLKIPQQ 385
P + PCIL DS+ G+ + ++ YL E+ + + N++ L++PQQ
Sbjct: 429 PQRVPCILHLDSIKGSHKGGLINIFPSYLREEWKARHENTTNDSSRAPNMQSISLELPQQ 488
Query: 386 NNFTDCGLYLLQYVEQFFKDPITDYTLPI-----KQLT-NWFDEIVVTRKREEISNLLKS 439
N DCGL+LL Y++ F + + LT NWF + KR I LL +
Sbjct: 489 ENSFDCGLFLLHYLDLFVAQAPAKFNPSLISRSANFLTRNWFPAKEASLKRRNILELLYN 548
Query: 440 LMNKYNP-----DSHLTLPDITFPTLNGKLIESEDNEEC 473
L ++P +S P N + ESE+ EC
Sbjct: 549 LHKGHDPSILPANSKSEPPHCGVSNRNDQETESENVIEC 587
>At1g09730.1 68414.m01092 Ulp1 protease family protein low
similarity to SP|Q9GZR1 SUMO-1-specific protease 1 (EC
3.4.22.-) (Sentrin-specific protease SENP6) (Protease
FKSG6) {Homo sapiens}; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 984
Score = 89.4 bits (212), Expect = 7e-18
Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 12/136 (8%)
Query: 107 LIYPPGK-GGIPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQREKTHIFSTFFY 165
++YP G + I D L + F+ND IIDFY+ YL + + T ++ + H F++FF+
Sbjct: 437 VVYPKGDPDAVSICKRDVELLQPETFVNDTIIDFYINYLKNQIQTE-EKHRFHFFNSFFF 495
Query: 166 KRLTTKPSKFNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVVVPINENCHWFV 225
++L + +P S++ + RVR WT+ V++F KDY+ VP+N N HW +
Sbjct: 496 RKLA------DLDKDP----SSIADGKAAFLRVRKWTRKVDMFGKDYIFVPVNYNLHWSL 545
Query: 226 AIICFPSLDGCRSMLD 241
+IC P R+ LD
Sbjct: 546 IVICHPGEVANRTDLD 561
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 330 KQPCILIFDSLAGASRSRVVATLRDYLTCEY---HVKVSPLKIFNKDNIKGSCLKIPQQN 386
K PCIL DS+ G S + + ++ YL E+ H + S N++ L++PQQ
Sbjct: 567 KVPCILHMDSIKG-SHAGLKNLVQTYLCEEWKERHKETSDDISSRFMNLRFVSLELPQQE 625
Query: 387 NFTDCGLYLLQYVEQFFKD------PITDYTLPIKQLTNWFDEIVVTRKREEISNLLKSL 440
N DCGL+LL Y+E F + P Y NWF + KR I L+ L
Sbjct: 626 NSFDCGLFLLHYLELFLAEAPLNFSPFKIYNASNFLYLNWFPPAEASLKRTLIQKLIFEL 685
Query: 441 M 441
+
Sbjct: 686 L 686
>At1g10570.2 68414.m01191 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to EST gb|N96456
Length = 570
Score = 78.6 bits (185), Expect = 1e-14
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 38 PEIITEEAKVALNTLFGKVTDELNSREANDILVRTCPKESNN--VTKMATRSLSASSVGV 95
P ++ ++ + + G T S +A+ + +C K+S++ + LS V
Sbjct: 245 PYLLVDDDDGDDDKVIGYETPRHWSLKASPLQSSSCRKKSDDKVINLDEDEPLSPMVVEE 304
Query: 96 RCSNTPDIKQILIYPP-----GKGGIPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLT 150
C + + + YP G+ + ++ +D CL+ ++L +I+FY++Y+ H V +
Sbjct: 305 ACELPEGLPEDIYYPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFS 364
Query: 151 HNQREKT-HIFSTFFYKRLTTKPSKFNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFE 209
++ H F+TFFYK+LT S + + + R W K ++F
Sbjct: 365 ADKTAANCHFFNTFFYKKLTEAVSYKGNDRDAY------------FVKFRRWWKGFDLFC 412
Query: 210 KDYVVVPINENCHWFVAIICFP 231
K Y+ +PI+E+ HW + IIC P
Sbjct: 413 KSYIFIPIHEDLHWSLVIICIP 434
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 380 LKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTL-PIKQL-TNWFDEIVVTRKREEISNLL 437
+++PQQ N DCGL+LL ++ +F ++ TL +K + WF + R +I N+L
Sbjct: 500 VQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLKMIHKKWFKPEEASALRIKIWNIL 559
Query: 438 KSLMNKYN 445
L K N
Sbjct: 560 VDLFRKGN 567
>At1g10570.1 68414.m01190 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to EST gb|N96456
Length = 571
Score = 78.6 bits (185), Expect = 1e-14
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 38 PEIITEEAKVALNTLFGKVTDELNSREANDILVRTCPKESNN--VTKMATRSLSASSVGV 95
P ++ ++ + + G T S +A+ + +C K+S++ + LS V
Sbjct: 246 PYLLVDDDDGDDDKVIGYETPRHWSLKASPLQSSSCRKKSDDKVINLDEDEPLSPMVVEE 305
Query: 96 RCSNTPDIKQILIYPP-----GKGGIPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLT 150
C + + + YP G+ + ++ +D CL+ ++L +I+FY++Y+ H V +
Sbjct: 306 ACELPEGLPEDIYYPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFS 365
Query: 151 HNQREKT-HIFSTFFYKRLTTKPSKFNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFE 209
++ H F+TFFYK+LT S + + + R W K ++F
Sbjct: 366 ADKTAANCHFFNTFFYKKLTEAVSYKGNDRDAY------------FVKFRRWWKGFDLFC 413
Query: 210 KDYVVVPINENCHWFVAIICFP 231
K Y+ +PI+E+ HW + IIC P
Sbjct: 414 KSYIFIPIHEDLHWSLVIICIP 435
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 380 LKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTL-PIKQL-TNWFDEIVVTRKREEISNLL 437
+++PQQ N DCGL+LL ++ +F ++ TL +K + WF + R +I N+L
Sbjct: 501 VQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLKMIHKKWFKPEEASALRIKIWNIL 560
Query: 438 KSLMNKYN 445
L K N
Sbjct: 561 VDLFRKGN 568
>At1g60220.1 68414.m06782 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 604
Score = 72.9 bits (171), Expect = 6e-13
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 75 KESNNVTKMATRSLSASSVGVRCSNTPD-IKQILIYPPGKGG--IPINTEDYMCLAQDQF 131
K + V + S+V + + P+ +++ + YP + + +D CLA ++
Sbjct: 319 KSEDTVINVDEEEAQPSTVAEQAAELPEGLQEDICYPTRDDPHFVQVCLKDLECLAPREY 378
Query: 132 LNDVIIDFYLKYLVHDVLTHNQ-REKTHIFSTFFYKRLTTKPSKFNKSSNPHEWDSNLTP 190
L +++FY+++L + + NQ H F+T+FYK+L S+ + N
Sbjct: 379 LTSPVMNFYMRFLQQQISSSNQISADCHFFNTYFYKKL----------SDAVTYKGNDKD 428
Query: 191 AQKRHARVRTWTKNVNIFEKDYVVVPINENCHWFVAIICFP 231
A R R W K +++F K Y+ +PI+E+ HW + I+C P
Sbjct: 429 AF--FVRFRRWWKGIDLFRKAYIFIPIHEDLHWSLVIVCIP 467
Score = 30.3 bits (65), Expect = 4.3
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 375 IKGSCLKIPQQNNFTDCGLYLLQYVEQFFKD 405
I + +++PQQ N DCG ++L ++++F ++
Sbjct: 529 ISEAVVQVPQQKNDFDCGPFVLFFIKRFIEE 559
>At4g15880.1 68417.m02413 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; low similarity to
sentrin/SUMO-specific protease [Homo sapiens]
GI:6906859; identical to cDNA hypothetical protein,
partial (1189 bp) GI:2326349
Length = 489
Score = 42.7 bits (96), Expect = 8e-04
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 16/114 (14%)
Query: 116 IPINTEDYMCLAQDQFLNDVIIDFYLKYL-VHDVLTHNQREKTHIFSTFFYKRLTTKPSK 174
I I E CL +LND +I+ YL+ L + + K H F+TFFYK+L + S
Sbjct: 288 IDITGEVLQCLTPSAWLNDEVINVYLELLKERETREPKKYLKCHYFNTFFYKKLVS-DSG 346
Query: 175 FNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVVVPINENCHWFVAII 228
+N + W T + +A + + D + VPI+ HW +A+I
Sbjct: 347 YNFKA-VRRW---TTQRKLGYA----------LIDCDMIFVPIHRGVHWTLAVI 386
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 334 ILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQQNNFTDCGL 393
+L DSL G ++ L Y+ E + K S KI +PQQ N DCG+
Sbjct: 393 LLYLDSLNGVD-PMILNALAKYMGDEANEK-SGKKIDANSWDMEFVEDLPQQKNGYDCGM 450
Query: 394 YLLQYVEQF 402
++L+Y++ F
Sbjct: 451 FMLKYIDFF 459
>At4g00690.1 68417.m00094 Ulp1 protease family protein similar to
SUMO-1/Smt3-specific isopeptidase 2 [Mus musculus]
GI:16118473, sentrin/SUMO-specific protease [Homo
sapiens] GI:6906859; contains Pfam profile PF02902: Ulp1
protease family, C-terminal catalytic domain
Length = 242
Score = 41.9 bits (94), Expect = 0.001
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 104 KQILIYPPGKGGIPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQRE-KTHIFST 162
K+IL+ I I+ E CL +Q+LND + + YL+ L Q+ K H F+T
Sbjct: 22 KKILVSHKNSN-IDISGETLQCLRPNQWLNDDVTNLYLELLKERQTRDPQKYFKCHFFNT 80
Query: 163 FFYKRLTTKPSKFNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVVVPINENCH 222
FFY +L + S +N ++ S T +K ++ + D + VPI+ + H
Sbjct: 81 FFYVKLVS-GSGYN-----YKAVSRWTTKRK---------LGYDLIDCDIIFVPIHIDIH 125
Query: 223 WFVAII 228
W + +I
Sbjct: 126 WTLGVI 131
Score = 29.5 bits (63), Expect = 7.6
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 383 PQQNNFTDCGLYLLQYVE 400
PQQ N DCG+++L+Y++
Sbjct: 186 PQQQNGYDCGMFMLKYID 203
>At3g06910.1 68416.m00820 Ulp1 protease family protein similar to
sentrin/SUMO-specific protease [Homo sapiens]
GI:6906859; contains Pfam profile PF02902: Ulp1 protease
family, C-terminal catalytic domain
Length = 502
Score = 40.3 bits (90), Expect = 0.004
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 116 IPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQRE-KTHIFSTFFYKRLTTKPSK 174
I I + CL ++LND +I+ Y+ L ++ K H F+TFF+ +L +
Sbjct: 300 IDITGKILRCLKPGKWLNDEVINLYMVLLKEREAREPKKFLKCHFFNTFFFTKLVNSATG 359
Query: 175 FNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVVVPINENCHWFVAII 228
+N + W S KR ++ + D + +PI+ N HW +A+I
Sbjct: 360 YNYGA-VRRWTS-----MKR--------LGYHLKDCDKIFIPIHMNIHWTLAVI 399
>At3g48480.1 68416.m05292 hypothetical protein
Length = 169
Score = 33.9 bits (74), Expect = 0.35
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 382 IPQQNNFTDCGLYLLQYVEQFFKDPITDYT---LPIKQLTNWFDEIVVTRKREEISNL 436
+PQQ N +CG ++L Y+ +F +D ++ +P +WF + + +E+ +L
Sbjct: 108 VPQQTNDVECGSFVLYYIHRFIEDAPENFNVEDMPYFLKEDWFSHKDLEKFCDELHSL 165
>At1g61360.1 68414.m06915 S-locus lectin protein kinase family
protein contains protein kinase domain, Pfam:PF00069;
contains S-locus glycoprotein family domain,
Pfam:PF00954
Length = 821
Score = 31.5 bits (68), Expect = 1.9
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Query: 442 NKYNPDSHLTLPDITFPTLNGKLIESEDNEECLEGERGNQNSIKKSEKDLETATLTFVKQ 501
N+ P S T+ ++T + NG LI + ++ + G+ S K + L+T L V
Sbjct: 73 NREKPVSS-TMANLTISS-NGSLILLDSKKDLVWSSGGDPTSNKCRAELLDTGNLVVVDN 130
Query: 502 IPSELVKRSFGDPSDGTIVRKTIRIASDIEN---RSLVQMKPELIKKAGAFLASVT 554
+ + +SF D T++ T + DI N R L K E G F+A +T
Sbjct: 131 VTGNYLWQSFEHLGD-TMLPLT-SLMYDIPNNKKRVLTSWKSETDPSPGEFVAEIT 184
>At1g29110.1 68414.m03563 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 334
Score = 31.5 bits (68), Expect = 1.9
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 344 SRSRVVATLRDYLTCEYHVK--VSPLKIFNKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQ 401
S++R TL + +YH + +++ ++ K LK+ ++N L+++E
Sbjct: 21 SQARPHVTLNEQSIVDYHQQWMTQFSRVYKDESEKEMRLKVFKKN---------LKFIEN 71
Query: 402 FFKDPITDYTLPIKQLTNW-FDEIVVTRKREEIS-NLLKSLMNKYNPDSHLTLPDI 455
F YTL + + T+W +E + T ++ L L NK P + + DI
Sbjct: 72 FNNMGNQSYTLGVNEFTDWKTEEFLATHTGLRVNVTSLSELFNKTKPSRNWNMSDI 127
>At5g60190.1 68418.m07545 Ulp1 protease family protein low
similarity to sentrin/SUMO-specific protease [Homo
sapiens] GI:6906859; contains Pfam profile PF02902: Ulp1
protease family, C-terminal catalytic domain
Length = 226
Score = 30.7 bits (66), Expect = 3.3
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 364 VSPLKIFNKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQLTNWFDE 423
VSP + N D C PQQ N DCG++LL + + +L WF
Sbjct: 140 VSPF-VSNGDASYKECTDTPQQKNGYDCGVFLLATARVICEWFSSGGMKNRDEL--WFAN 196
Query: 424 I------VVTRKREEISNLLKSLMNK 443
+ +V REEI L+K LM++
Sbjct: 197 VKETVPDLVNHLREEILALIKKLMSE 222
>At1g11280.3 68414.m01295 S-locus protein kinase, putative similar
to receptor protein kinase [Ipomoea trifida]
gi|836954|gb|AAC23542; contains protein kinase domain,
Pfam:PF00069; contains S-locus glycoprotein family
domain, Pfam:PF00954
Length = 808
Score = 30.7 bits (66), Expect = 3.3
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 461 NGKLIESEDNEECLEGERGNQNSIKKSEKDLETATLTFVKQIPSELVKRSFGDPSDGTIV 520
NG LI + ++ + R S K K L+T L V + L+ +SF +P D +
Sbjct: 98 NGSLILLDSSKNVVWSTRRPSISNKCHAKLLDTGNLVIVDDVSENLLWQSFENPGDTMLP 157
Query: 521 RKTIRI-ASDIENRSLVQMKPELIKKAGAFLASVT-GISALIGFSATLSTAKKSDP 574
++ + E R L K G F+ +T + A I S K+S P
Sbjct: 158 YSSLMYNLATGEKRVLSSWKSHTDPSPGDFVVRLTPQVPAQIVTMRGSSVYKRSGP 213
>At1g11280.2 68414.m01294 S-locus protein kinase, putative similar
to receptor protein kinase [Ipomoea trifida]
gi|836954|gb|AAC23542; contains protein kinase domain,
Pfam:PF00069; contains S-locus glycoprotein family
domain, Pfam:PF00954
Length = 820
Score = 30.7 bits (66), Expect = 3.3
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 461 NGKLIESEDNEECLEGERGNQNSIKKSEKDLETATLTFVKQIPSELVKRSFGDPSDGTIV 520
NG LI + ++ + R S K K L+T L V + L+ +SF +P D +
Sbjct: 98 NGSLILLDSSKNVVWSTRRPSISNKCHAKLLDTGNLVIVDDVSENLLWQSFENPGDTMLP 157
Query: 521 RKTIRI-ASDIENRSLVQMKPELIKKAGAFLASVT-GISALIGFSATLSTAKKSDP 574
++ + E R L K G F+ +T + A I S K+S P
Sbjct: 158 YSSLMYNLATGEKRVLSSWKSHTDPSPGDFVVRLTPQVPAQIVTMRGSSVYKRSGP 213
>At1g11280.1 68414.m01296 S-locus protein kinase, putative similar
to receptor protein kinase [Ipomoea trifida]
gi|836954|gb|AAC23542; contains protein kinase domain,
Pfam:PF00069; contains S-locus glycoprotein family
domain, Pfam:PF00954
Length = 830
Score = 30.7 bits (66), Expect = 3.3
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 461 NGKLIESEDNEECLEGERGNQNSIKKSEKDLETATLTFVKQIPSELVKRSFGDPSDGTIV 520
NG LI + ++ + R S K K L+T L V + L+ +SF +P D +
Sbjct: 108 NGSLILLDSSKNVVWSTRRPSISNKCHAKLLDTGNLVIVDDVSENLLWQSFENPGDTMLP 167
Query: 521 RKTIRI-ASDIENRSLVQMKPELIKKAGAFLASVT-GISALIGFSATLSTAKKSDP 574
++ + E R L K G F+ +T + A I S K+S P
Sbjct: 168 YSSLMYNLATGEKRVLSSWKSHTDPSPGDFVVRLTPQVPAQIVTMRGSSVYKRSGP 223
>At5g15920.1 68418.m01862 structural maintenance of chromosomes
(SMC) family protein (MSS2) similar to SMC-related
protein MSS2 [Arabidopsis thaliana] GI:9965743; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1053
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 459 TLNGKLIESEDNEECLEGERGNQNSIKKSEKDLETATLTFVKQIPSELVKRSF 511
++NGK + EDNE+ L +R KD+E A +K + + R F
Sbjct: 384 SINGKKNQKEDNEKLLSQKRYTLRQCVDKLKDMENANNKLLKALANSGADRIF 436
>At4g31410.2 68417.m04457 expressed protein
Length = 308
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 215 VPINENCHWFVAIICFPSLDGCRSMLDNRTVTPQEIRKKERRSSLQIGNT 264
VP NE +W+ + I + D R+ + R E R+ RRSS + N+
Sbjct: 212 VPNNEG-NWWTSCILYQMFDNIRNARNRRRSRMSESRRGSRRSSYENSNS 260
>At4g31410.1 68417.m04456 expressed protein
Length = 308
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 215 VPINENCHWFVAIICFPSLDGCRSMLDNRTVTPQEIRKKERRSSLQIGNT 264
VP NE +W+ + I + D R+ + R E R+ RRSS + N+
Sbjct: 212 VPNNEG-NWWTSCILYQMFDNIRNARNRRRSRMSESRRGSRRSSYENSNS 260
>At2g27980.1 68415.m03391 expressed protein
Length = 1037
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 425 VVTRKREEISN-LLKSLMNKYNPDS-----HLTLPDITFPTLNGKLIESEDNE 471
++ R E++SN +L L K P+ + T PDI + L+GKL S+D +
Sbjct: 817 LIVRGEEKLSNNILNFLRKKEQPNEENCPDYKTTPDIRWRVLSGKLTSSDDTK 869
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,521,828
Number of Sequences: 28952
Number of extensions: 650179
Number of successful extensions: 1666
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1626
Number of HSP's gapped (non-prelim): 34
length of query: 674
length of database: 12,070,560
effective HSP length: 86
effective length of query: 588
effective length of database: 9,580,688
effective search space: 5633444544
effective search space used: 5633444544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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