Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000374-TA|BGIBMGA000374-PA|IPR003653|Peptidase C48,
SUMO/Sentrin/Ubl1, IPR009792|Protein of unknown function DUF1358
(674 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 99 2e-21
SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharo... 50 1e-06
SPAC11D3.18c |||nicotinic acid plasma membrane transporter |Schi... 31 0.39
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 30 1.2
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 30 1.2
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 29 1.6
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 29 1.6
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 29 2.1
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 29 2.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 2.8
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 28 3.7
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 28 4.9
SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA reductase|Schi... 28 4.9
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 28 4.9
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 27 6.4
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 99.1 bits (236), Expect = 2e-21
Identities = 56/127 (44%), Positives = 72/127 (56%), Gaps = 18/127 (14%)
Query: 106 ILIYP-PGKGGIPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQ--REKTHIFST 162
IL+YP G I I D L + +FLND I+DFYL+YL + T N THIF+T
Sbjct: 350 ILVYPFSGTNSIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNT 409
Query: 163 FFYKRLTTKPSKFNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVVVPINENCH 222
FFY RLT+K K K + H VR WT+ V++F K Y++VPINE H
Sbjct: 410 FFYNRLTSK-DKDGK--------------RLGHRGVRKWTQKVDLFHKKYIIVPINETFH 454
Query: 223 WFVAIIC 229
W++AIIC
Sbjct: 455 WYLAIIC 461
Score = 57.6 bits (133), Expect = 5e-09
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 332 PCILIFDSLAGASRSRVVATLRDYLTCE-YHVKVSPLKIFNKDNIKGSCLKIPQQNNFTD 390
P ILIFDSLA + + LR+YL E + K LK +I+G K+PQQ+NF+D
Sbjct: 502 PAILIFDSLANLHKG-ALNYLREYLLEEAFERKNVHLK---STDIRGFHAKVPQQSNFSD 557
Query: 391 CGLYLLQYVEQFFKDP 406
CG+Y L +VE F + P
Sbjct: 558 CGIYALHFVELFLETP 573
>SPBC19G7.09 |ulp1||SUMO deconjugating enzyme
Ulp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 568
Score = 49.6 bits (113), Expect = 1e-06
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 24/118 (20%)
Query: 113 KGGIPINTEDYMCLAQDQFLNDVIIDFYLKYLVHDVLTHNQREKTHIFSTFFYKRLTTKP 172
K IPI +D L Q+LND +I+FY+ + + + H F+TFFY L
Sbjct: 374 KFNIPITLKDLHTLRNRQWLNDEVINFYMNLISERSKIDSSLPRVHGFNTFFYTSLQ--- 430
Query: 173 SKFNKSSNPHEWDSNLTPAQKRHARVRTWTKN--VNIFEKDYVVVPINENCHWFVAII 228
++ +A VR W K VNI + D V +P++ + HW +A+I
Sbjct: 431 -------------------RRGYAGVRRWAKKARVNIADMDAVFIPVHLDVHWCMAVI 469
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 337 FDSLAGASRSRVVATLRDYLTCEYH--VKVSPLKIFNKDNIKGSCLKIPQQNNFTDCGLY 394
+DSLAG S +V LRDY E V VS + F DN P+Q N DCG++
Sbjct: 479 WDSLAG-SPGKVFDLLRDYYIAETKGAVDVSDWENFMDDNS-------PRQRNGHDCGVF 530
Query: 395 LLQYVE 400
+ E
Sbjct: 531 ACKTAE 536
>SPAC11D3.18c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 31.5 bits (68), Expect = 0.39
Identities = 16/83 (19%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 393 LYLLQYVEQFFKDPITDYTLPIKQLTNWFDEIVVTRKREEISNLLKSLMNKYNPDSHLTL 452
+Y+++ + F P+ + LP K WF +TR+ E++ + + + +Y+ + H
Sbjct: 222 IYIVEGLVSFIGVPLCLFALPDKMENAWF----LTREEREVAIIRRDINARYHGEQHFEW 277
Query: 453 PDITFPTLNGKLIESEDNEECLE 475
++ + K+ S ++ C +
Sbjct: 278 SEVRKAFKDPKVYVSATSQFCAD 300
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 440 LMNKYNPDSHLTLP--DITFPTLNGKLIESEDNEECLEGERGNQNSIKKSEKDLETATLT 497
+++ + + LT P +I P NG L+ E + + RG Q + +SE DL+ T T
Sbjct: 493 ILSSNSLSTSLTYPLIEIILPIKNGFLMGKETFQIAFKKSRGYQILLPESELDLKINTTT 552
Query: 498 F 498
F
Sbjct: 553 F 553
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 21 YYDPMSKTD-PYRRITLLPEIITEEAKVALNTLFGKVTDELNSREANDILVRTCPKESNN 79
Y P S T ++R+ LL + L+GKV E+ S +L K N
Sbjct: 419 YTPPKSATSHKHKRVDLL----ASRKENVWTGLYGKVQTEMVSNRGEAVLNENNSKNRTN 474
Query: 80 VTKMATRSLSASSVGVRCSNTPDI 103
VTK + S S+G SN +I
Sbjct: 475 VTKPNSYKNSVLSIGNNHSNHSNI 498
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/111 (20%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 396 LQYVEQFFKDPITDYTLPIKQLTNWFDEIVVTRKR----EEISNLLKS---LMNKYNPDS 448
L+Y +Q + ++ + + +W +E ++ + +I L+++ + KY+
Sbjct: 14 LEYSQQLTNGKMKEFFFLVSETMDWLNEHMLEVSKLQLESDIYELVRTPTKIKEKYSTPR 73
Query: 449 HLTLPDITFPTLNGKL--IESEDNEECLEGERGNQNSIKKSEKDLETATLT 497
+ PT +L I+ + E +EG + +++ K K+L TAT T
Sbjct: 74 LSPVHRCALPTPRMRLTSIQHQLEEAAVEGYKSGESNTVKEPKELHTATNT 124
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 29.5 bits (63), Expect = 1.6
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 464 LIESEDNEECLEGERGNQNSIKKSEKDLETATLTFV---KQIPSELV----KRSFGDPSD 516
+ +SE+ + + GNQNS +D +T L +QIPS L + G +
Sbjct: 17 MADSEEYKTVIGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQAR 76
Query: 517 GTIVRKTIRIASDIENRSLVQMKPELIKKAGAFLASVTGISALIGFSATLSTAKKSDPK 575
G +VR ++ + L + EL + A+ + IGF T+ ++SDPK
Sbjct: 77 GQLVRNADNSVTNFRDL-LGKSHDELTLHHCHYSANPVNVEGQIGFKITVQEDEESDPK 134
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 482 NSIKKSEKDLETATLTFVKQIPSELVKRSFGDPSDGTIV 520
NS KK+ ++ ++T ++QIP L KR D S ++
Sbjct: 596 NSQKKTAPEVSPISVTLIEQIPFFLQKRDISDDSKDAVL 634
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 28.7 bits (61), Expect = 2.8
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 329 IKQPCILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQQNNF 388
+ PC D++ RVV + T +H +P++++NK G + P Q
Sbjct: 7 VSAPCFAFVDTIGSIGVCRVVR----FTT--FHN--TPIEVYNKKVNDGVWKRDPYQETA 58
Query: 389 TDCGLYLLQYVEQFFKDPITDYTLPIKQ--LTNWFDEIVVTRKREEISNLLKSL 440
L +E + + PIT ++P ++ + +W + R++ L SL
Sbjct: 59 VKAINRLYTELESYTQPPITQDSMPAEKGSILSWISPLKKMFSRKKSPTLTSSL 112
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 403 FKDPITDYTLPIKQLTNWFDEIVVTRK--REEISNLLKSLMNKYNPD 447
FKD T+ + PI+ T + D++ + + EE +L++ +N+ NPD
Sbjct: 1097 FKDQATETSHPIRLYTRYIDKVYIMFRFTDEESRDLIQRFLNE-NPD 1142
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 173 SKFNKSSNPHEWDSNLTPAQKRHARVRTWTKNVNIFEKDYVV 214
+++ KSSN + N + +R R R K +FE++Y+V
Sbjct: 1124 TQYTKSSNSSKMTRNTSKNNRRLERKRARGKKGTVFEEEYLV 1165
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 230 FPSLDGCRSMLDNRTVTPQEIRKKERRSSLQIGNTTITP 268
F D S DN T+ PQ R++ +RS N TP
Sbjct: 255 FDLQDDSESSEDNLTIQPQTPRRRHKRSRHNSSNLASTP 293
>SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA
reductase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1053
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 471 EECLEGERGNQNSIKKSEKDLETATLTFVKQIPSELVKRSFGDPSDGTIVRKTI 524
EEC+ Q S E E LT K+IP ++R D + ++R+T+
Sbjct: 600 EECITLYNNGQISTLNDE---EVVQLTLAKKIPLYALERVLKDVTRAVVIRRTV 650
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 27.9 bits (59), Expect = 4.9
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 26/130 (20%)
Query: 379 CLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQLTNWFD-EIVVTRKREEISNLL 437
C+ + QQ N DCG ++ + + + + +P + N + VT RE++S L
Sbjct: 155 CMPVQQQRNGYDCGAHVCAFTLELVRR-LLHSPMPTSSMWNLSTFQPDVTAIREQLSRCL 213
Query: 438 KSLMNK-------------------YNPDSHLTLPDITFPTLNGKLIESEDNEECLEGER 478
++N ++ +SHL L D+ P L +S D+ E E
Sbjct: 214 DHIINSLGTRVSGDFDEDFPTGTVFFDLESHLPLLDVALPVLP----KSSDSSE-TSHES 268
Query: 479 GNQNSIKKSE 488
N N K SE
Sbjct: 269 SNSNLKKSSE 278
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/88 (21%), Positives = 37/88 (42%)
Query: 357 TCEYHVKVSPLKIFNKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQ 416
T + ++ + L I K + +K PQQ N DCGL++ + + +P
Sbjct: 195 TNDCNLAIKNLGILLKKEFRVRHMKTPQQINDCDCGLHVCENTRILMYRLLQKPYVPKVD 254
Query: 417 LTNWFDEIVVTRKREEISNLLKSLMNKY 444
+ + R R+ + ++ SL+ Y
Sbjct: 255 MNLDHSVVDSVRLRKALMEVITSLLAAY 282
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,084,531
Number of Sequences: 5004
Number of extensions: 133403
Number of successful extensions: 406
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 387
Number of HSP's gapped (non-prelim): 24
length of query: 674
length of database: 2,362,478
effective HSP length: 77
effective length of query: 597
effective length of database: 1,977,170
effective search space: 1180370490
effective search space used: 1180370490
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -