GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000374-TA|BGIBMGA000374-PA|IPR003653|Peptidase C48,
SUMO/Sentrin/Ubl1, IPR009792|Protein of unknown function DUF1358
         (674 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    27   1.6  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    26   3.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   6.5  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   6.5  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   6.5  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   6.5  
AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    25   8.6  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         25   8.6  

>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 27.1 bits (57), Expect = 1.6
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 474 LEGERGNQNSIKKSEKDLETATLTFVKQIPSELVKRSFGDPSD 516
           LE +  N+N   KSE +  + +L+ V  IP E ++      SD
Sbjct: 83  LENQISNKNPNSKSESNNLSLSLSLVDMIPEEKLRGRHSSESD 125


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 25.8 bits (54), Expect = 3.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 414 IKQLTNWFDEIVVTRKREEISNLLKSLMNK 443
           I Q+T W+++I  T   E++  L+  +  K
Sbjct: 297 INQMTTWWNKIAKTMDEEDVRRLMSRVKGK 326


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 6.5
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 550 LASVTGISALIGFSATLSTAKKSDPKYFSKGLHGGAELGDAGAILALRALG 600
           L S T +S++  FS++ +T   SD   + KG         AG I  + A G
Sbjct: 608 LQSTTALSSITSFSSSGNTTVVSDYDVYGKG-STSTTTSSAGTICTVLAEG 657


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.0 bits (52), Expect = 6.5
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 550 LASVTGISALIGFSATLSTAKKSDPKYFSKGLHGGAELGDAGAILALRALG 600
           L S T +S++  FS++ +T   SD   + KG         AG I  + A G
Sbjct: 609 LQSTTALSSITSFSSSGNTTVVSDYDVYGKG-STSTTTSSAGTICTVLAEG 658


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 25.0 bits (52), Expect = 6.5
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 5/83 (6%)

Query: 133 NDVIIDFYLKYL----VHDVLTHNQREKTHIFSTFFYKRLTTKPSKFNKSSNPHEWDSNL 188
           +DV   FY   +     ++VL  N++ ++       +  L  K  K  ++  P +WD   
Sbjct: 162 DDVFTHFYTLVVRADNTYEVLIDNEKVESGSLEDD-WDFLPPKKIKDPEAKKPEDWDDRA 220

Query: 189 TPAQKRHARVRTWTKNVNIFEKD 211
           T A     +   W K  +I + D
Sbjct: 221 TIADPDDTKPEDWDKPEHIPDPD 243


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 6.5
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 71  RTCPKESNNVTKMATRSLSASSVGVRCSNTPDIKQILIYPPGKGGIPINTE 121
           R CP ESNN T  +T     S     CS++   ++ L  P  KG +  ++E
Sbjct: 215 RDCPMESNN-TPTSTTMRDYSRKNENCSSSGGQRESL-KPKPKGKVAKSSE 263


>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 17  NEGPYYDPMSKTDPYRRITL 36
           N+G  Y+P+++T  YR +T+
Sbjct: 481 NDGVSYEPLNRTANYRVVTM 500


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 17  NEGPYYDPMSKTDPYRRITL 36
           N+G  Y+P+++T  YR +T+
Sbjct: 481 NDGVSYEPLNRTANYRVVTM 500


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.134    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,238
Number of Sequences: 2123
Number of extensions: 25818
Number of successful extensions: 87
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 82
Number of HSP's gapped (non-prelim): 8
length of query: 674
length of database: 516,269
effective HSP length: 69
effective length of query: 605
effective length of database: 369,782
effective search space: 223718110
effective search space used: 223718110
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)