Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000373-TA|BGIBMGA000373-PA|undefined
(405 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g47330.1 68414.m05240 expressed protein contains Pfam profile... 36 0.048
At2g40270.2 68415.m04955 protein kinase family protein contains ... 34 0.15
At2g40270.1 68415.m04954 protein kinase family protein contains ... 34 0.15
At1g43850.1 68414.m05052 SEUSS transcriptional co-regulator iden... 33 0.26
At2g18510.1 68415.m02157 pre-mRNA splicing factor, putative simi... 32 0.60
At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family... 32 0.79
At5g66960.1 68418.m08442 prolyl oligopeptidase family protein si... 31 1.0
At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative ... 31 1.4
At1g53260.1 68414.m06035 hypothetical protein low similarity to ... 31 1.4
At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) severa... 31 1.8
At4g05150.1 68417.m00773 octicosapeptide/Phox/Bem1p (PB1) domain... 31 1.8
At5g17510.1 68418.m02054 expressed protein 30 2.4
At1g30500.2 68414.m03729 CCAAT-binding transcription factor (CBF... 30 2.4
At5g46400.1 68418.m05711 expressed protein 30 3.2
At4g34440.1 68417.m04894 protein kinase family protein contains ... 30 3.2
At2g46020.2 68415.m05725 transcription regulatory protein SNF2, ... 30 3.2
At2g46020.1 68415.m05724 transcription regulatory protein SNF2, ... 30 3.2
At5g55020.1 68418.m06853 myb family transcription factor (MYB120... 29 4.2
At3g26910.1 68416.m03367 hydroxyproline-rich glycoprotein family... 29 4.2
At1g25540.1 68414.m03171 phytochrome and flowering time regulato... 29 4.2
At2g38410.1 68415.m04718 VHS domain-containing protein / GAT dom... 29 5.5
At2g20880.1 68415.m02461 AP2 domain-containing transcription fac... 29 5.5
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 5.5
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 29 7.3
At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase I... 28 9.7
At5g14380.1 68418.m01680 hydroxyproline-rich glycoprotein family... 28 9.7
At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacu... 28 9.7
At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacu... 28 9.7
At1g26780.1 68414.m03260 myb family transcription factor (MYB117... 28 9.7
At1g22335.1 68414.m02794 expressed protein ; expression supporte... 28 9.7
At1g07460.1 68414.m00796 legume lectin family protein contains L... 28 9.7
>At1g47330.1 68414.m05240 expressed protein contains Pfam profile
PF01595: Domain of unknown function
Length = 527
Score = 35.9 bits (79), Expect = 0.048
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 254 EQVNVPFSEDTQIQCMQNTS-SEIDYFVSVGATTRIEEML--ENHPMLLGDISSTSSPNV 310
E V V ED + +Q E D +V++ R+ EN P ++ I+ +SS +
Sbjct: 413 EVVGVITMEDVIEELLQEEILDETDEYVNIHNRIRVNMHASPENLPSVITSITQSSSGST 472
Query: 311 MSQTQSSEMSTPEKSNSNDHVNNSPESPGQRSPPPR 346
S Q+S M+TP+ S + N+SP S P R
Sbjct: 473 -SPNQTSHMATPDSSPTTKPSNSSPTRKPSVSSPTR 507
>At2g40270.2 68415.m04955 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 482
Score = 34.3 bits (75), Expect = 0.15
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 314 TQSSEMSTPEKSNSNDHVNNSPESPGQRSPPPRHVDGMLALCKSC 358
T++S +S P+K +S V+ SP +P SP PR+ + L C
Sbjct: 92 TKASTVSEPQKRSSTQDVSPSPSAPLANSPIPRNSHSSVPLVVGC 136
>At2g40270.1 68415.m04954 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 489
Score = 34.3 bits (75), Expect = 0.15
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 314 TQSSEMSTPEKSNSNDHVNNSPESPGQRSPPPRHVDGMLALCKSC 358
T++S +S P+K +S V+ SP +P SP PR+ + L C
Sbjct: 99 TKASTVSEPQKRSSTQDVSPSPSAPLANSPIPRNSHSSVPLVVGC 143
>At1g43850.1 68414.m05052 SEUSS transcriptional co-regulator
identical to SEUSS transcriptional co-regulator
[Arabidopsis thaliana] gi|18033922|gb|AAL57277
Length = 877
Score = 33.5 bits (73), Expect = 0.26
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 90 VPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQPLTQRXXXXXXXXXXXRQVALYNG 149
+PGP+PQQ L Q QQQ Q Q Q Q RQVAL G
Sbjct: 576 LPGPSPQQASDQLRQQQQQQQQ--QQQQQQQQQQQQQQQQTVSQNTNSDQSSRQVALMQG 633
>At2g18510.1 68415.m02157 pre-mRNA splicing factor, putative similar
to SP|Q15427 Splicing factor 3B subunit 4 (Spliceosome
associated protein 49) (SAP 49) (SF3b50) (Pre-mRNA
splicing factor SF3b 49 kDa subunit) {Homo sapiens};
contains Pfam profile PF00076: RNA recognition motif.
(a.k.a. RRM, RBD, or RNP domain)
Length = 363
Score = 32.3 bits (70), Expect = 0.60
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 81 PPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQP 126
PPP H G P QH Q G QQ P Y H+ P P
Sbjct: 316 PPPQAMGMHQHGGWPPQHMQQQGGPPQQQQPP--YQHHHMSMPPPP 359
>At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 300
Score = 31.9 bits (69), Expect = 0.79
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 71 GVNIPQQFNTPPPNMRQNHVPGPAPQQ--HQQNLGYTQHYQQQPITYDQSHVPQHPQPLT 128
G N + N PPP Q+ P P QQ + +GY ++Q P + + P P
Sbjct: 18 GQNSERDINQPPPPPPQSQPPPPQTQQQTYPPVMGYPGYHQPPPPYPNYPNAPYQQYPYA 77
Query: 129 Q 129
Q
Sbjct: 78 Q 78
>At5g66960.1 68418.m08442 prolyl oligopeptidase family protein
similar to OpdB [Treponema denticola] GI:13786054;
contains Pfam profiles PF00326: prolyl oligopeptidase
family, PF02897: Prolyl oligopeptidase, N-terminal
beta-propeller domain
Length = 792
Score = 31.5 bits (68), Expect = 1.0
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 242 LPKESCTLQEVLEQVNVPFSEDTQ---IQCMQNTSSEIDYFVSVGATTRIEE--ML-ENH 295
LPK + ++ N F+ T I + + +DY + G +++ ML E
Sbjct: 429 LPKH---VSQIFPGTNYDFNSPTMRFTISSLVMPDAVVDYDLLNGKWNIVQQQNMLHERT 485
Query: 296 PMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNN 333
+L G +ST SPN+ S T++ T + + ND++ N
Sbjct: 486 RVLYGTANSTESPNIPSGTRTVSFDTEDTTAENDNLWN 523
>At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative
similar to DNA-binding protein DF1 [Pisum sativum]
GI:13646986
Length = 603
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 76 QQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQPLTQ 129
Q+ + PN Q P P PQQ + ++ + QQQP +S PQ P PL Q
Sbjct: 328 QKLSEKQPNQPQ---PQPQPQQVRPSMQLNNNNQQQPP--QRSPPPQPPAPLPQ 376
>At1g53260.1 68414.m06035 hypothetical protein low similarity to
SP|Q38732 DAG protein, chloroplast precursor
{Antirrhinum majus}
Length = 358
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 81 PPPNMRQNHVPGPAPQQHQQNLG-----YTQHYQ-QQPITYDQSHVPQHPQPLTQ 129
PPPNM QN+ PAP +Q G Q+YQ P +QS+ P + Q
Sbjct: 233 PPPNMNQNYQGPPAPNMNQNYQGPPPSNMGQNYQGPPPPNMNQSYQGPPPPNMNQ 287
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 81 PPPNMRQNHVPGPAPQQHQQNLGYTQHYQQ 110
PPPNM QN+ GP P N G++ +YQQ
Sbjct: 307 PPPNMSQNY-EGPPPP--NMNGGWSGNYQQ 333
>At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) several
homeodomain proteins;
Length = 575
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 282 VGATTRI-EEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQ 340
+ A R+ + M+E ML S SS + ++S P+ SN+N +++ + P
Sbjct: 400 INARVRVWKPMVEEIHMLETRQSQRSSSSSWRDERTSTTVFPDNSNNNPSSSSAQQRPNN 459
Query: 341 RSPPPR 346
SPP R
Sbjct: 460 SSPPRR 465
>At4g05150.1 68417.m00773 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein various predicted proteins
contains Pfam profile PF00564: PB1 domain
Length = 477
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 74 IPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVP 121
+ QQ N P N + + PGP Q H Q G+T H Q P+ Y VP
Sbjct: 321 VMQQSNLPV-NSQWQYAPGPGQQVHYQ--GHTIH--QSPVYYVPGSVP 363
>At5g17510.1 68418.m02054 expressed protein
Length = 369
Score = 30.3 bits (65), Expect = 2.4
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 62 IVQKHPVTDGVNIPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQ 111
++Q P+ PQQ TP PN+ Q P QQ QQN+ Q QQQ
Sbjct: 70 LIQNRPINPP---PQQNPTPNPNLGQQ-TPN-FQQQQQQNVSSQQMMQQQ 114
>At1g30500.2 68414.m03729 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
Length = 190
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 56 ESITAAIVQKHPVTDGVNIPQQFNTPPPNMRQNHVPGPAPQQ--HQQNLGYTQHYQQQPI 113
ESI ++V P T P Q+ P P R P P P H Q +G Q Q P+
Sbjct: 36 ESIVTSLVYSDPGTTNSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQ--QGVPL 93
Query: 114 TYDQSHVP 121
D P
Sbjct: 94 PSDAVEEP 101
>At5g46400.1 68418.m05711 expressed protein
Length = 1036
Score = 29.9 bits (64), Expect = 3.2
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 14/122 (11%)
Query: 66 HPVTDGVNIPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHY--QQQPITYDQSHVPQH 123
+P T P Q N Q+H A Q Q Y+ +Y QQQ + +Q Q+
Sbjct: 853 YPQTQIPQNPVQSNYQQEGQMQSH---EAYNQMWQQYYYSYYYYQQQQQLMSEQPQPNQN 909
Query: 124 PQPLTQRXXXXXXXXXXXRQVALYNGQRMVLTEYKRLQQTPQNIISQQSRETGRQTLVRS 183
PQP + Q+ Q T+Y + QQ Q QQS+E Q ++
Sbjct: 910 PQPQLDQNLV---------QLLSKQYQSQAKTQYLQPQQVEQVNTQQQSQEPQNQQQIQF 960
Query: 184 KE 185
++
Sbjct: 961 QQ 962
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 301 DISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQRSPP 344
DIS++ SP TQ + T S+ N SP++P SPP
Sbjct: 50 DISASFSPPPAPPTQETSPPTSPSSSPPVVANPSPQTPENPSPP 93
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 75 PQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQS-HVPQHPQP 126
P + PPP++ + P PAP Q+ T P+ + S P++P P
Sbjct: 41 PSSISAPPPDISASFSPPPAPPT-QETSPPTSPSSSPPVVANPSPQTPENPSP 92
>At2g46020.2 68415.m05725 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2193
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 75 PQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQP-ITYDQSHV 120
P+Q NTP PN+ GP Q+ TQ QQ+ T Q HV
Sbjct: 425 PRQLNTPTPNLVAPSDTGPLSNSSLQSGQGTQQAQQRSGFTKQQLHV 471
>At2g46020.1 68415.m05724 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2192
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 75 PQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQP-ITYDQSHV 120
P+Q NTP PN+ GP Q+ TQ QQ+ T Q HV
Sbjct: 425 PRQLNTPTPNLVAPSDTGPLSNSSLQSGQGTQQAQQRSGFTKQQLHV 471
>At5g55020.1 68418.m06853 myb family transcription factor (MYB120)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 523
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 82 PPNMRQNHV--PGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQ 125
PP++ NH P P QQ QQ+ + H+QQQ PQ Q
Sbjct: 138 PPDIIPNHQLHPHPHHQQQQQHNHHHHHHQQQQQHQQMYFQPQSSQ 183
>At3g26910.1 68416.m03367 hydroxyproline-rich glycoprotein family
protein common family member:At2g33490 [Arabidopsis
thaliana]
Length = 608
Score = 29.5 bits (63), Expect = 4.2
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 292 LENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQRSPPPRHVDGM 351
L P+L S+SSP V S T S P S + ++ P PG +PPPR
Sbjct: 457 LPTPPVLQSHPHSSSSPRV-SPTASPP---PASSPRLNELHELPRPPGHFAPPPRRAKSP 512
Query: 352 LALCKSCGYTGFN 364
+ S T +N
Sbjct: 513 GLVGHSAPLTAWN 525
>At1g25540.1 68414.m03171 phytochrome and flowering time regulatory
protein (PFT1) PMID: 12815435
Length = 836
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/56 (33%), Positives = 22/56 (39%)
Query: 75 PQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQPLTQR 130
PQ N +Q H QQ QQ QH QQQ + Q QH Q Q+
Sbjct: 676 PQIPNQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQ 731
>At2g38410.1 68415.m04718 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 671
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 95 PQQHQQNLGYTQHYQ-QQPITYDQSHVPQHPQ 125
PQQ Q GY+QH Q QQ Y Q PQH Q
Sbjct: 488 PQQPQAQQGYSQHQQHQQQQGYSQ---PQHSQ 516
>At2g20880.1 68415.m02461 AP2 domain-containing transcription
factor, putative similar to AP2 domain containing
protein RAP2.4 [Arabidopsis thaliana] GI:2281633
Length = 336
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 67 PVTDGVNIPQQFNTPPPNMRQN---HVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQH 123
P T ++ F PP Q H P+ Q+ QQ + + Q QP Q QH
Sbjct: 83 PTTTTCSVSFPFYLPPAIQNQQRFLHPNDPSGQRQQQMISFDPQQQVQPYVAQQQQQQQH 142
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 303 SSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQRSPPP 345
SS SP+V + +S P S ++ +SP P PPP
Sbjct: 517 SSEMSPSVRAYPPPPPLSPPPPSPPPPYIYSSPPPPSPSPPPP 559
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 28.7 bits (61), Expect = 7.3
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 271 NTSSEIDYFVSVGATTRIEEMLENHPMLLGDISST--SSPNVMSQTQSSEMSTPEKSNSN 328
N+S EIDYF +T +E + N + ST +S + Q +ST + SN
Sbjct: 131 NSSKEIDYFQEYPISTSMELVSNNSDQVPQPEKSTPFNSYEEIDYIQDYPVSTSMELVSN 190
Query: 329 DHVNNSPESPGQRSPP 344
N+ P ++SPP
Sbjct: 191 ---NSDQVPPPEKSPP 203
>At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase IV
GI:9651815 from [Arabidopsis thaliana]; identical to
cDNA DNA ligase IV, GI:9651814
Length = 1219
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 203 SQHENNETPSGPSEQTSEPQSAKMLIFLQNG 233
S+H+ E S S QT EP S+K+ I G
Sbjct: 925 SEHDTTEVASQGSAQTKEPASSKIAITSSRG 955
>At5g14380.1 68418.m01680 hydroxyproline-rich glycoprotein family
protein identical to gi|4775268|emb|CAB42531
Length = 150
Score = 28.3 bits (60), Expect = 9.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 284 ATTRIEEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQRSP 343
ATT+ P SS SSP S ++E PE S ++S E+P SP
Sbjct: 44 ATTKAPSAPTKAPAAAPKSSSASSPKASSP--AAEGPVPEDDYSASSPSDSAEAPTVSSP 101
Query: 344 P 344
P
Sbjct: 102 P 102
>At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 28.3 bits (60), Expect = 9.7
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 59 TAAIVQKHPVTDGVNIPQ---QFNTPPP-NMRQNHVPGPAPQQHQQNLGYTQ---HYQQQ 111
+++ V K+P D + P+ Q TPPP + NH P QH Q+ +Q H Q
Sbjct: 18 SSSSVAKYPHEDSGSYPKSPHQPVTPPPAQVHHNH---QQPHQHPQSQSQSQPQPHLQAL 74
Query: 112 PITYDQSH 119
P + SH
Sbjct: 75 PHPHSHSH 82
>At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 28.3 bits (60), Expect = 9.7
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 59 TAAIVQKHPVTDGVNIPQ---QFNTPPP-NMRQNHVPGPAPQQHQQNLGYTQ---HYQQQ 111
+++ V K+P D + P+ Q TPPP + NH P QH Q+ +Q H Q
Sbjct: 18 SSSSVAKYPHEDSGSYPKSPHQPVTPPPAQVHHNH---QQPHQHPQSQSQSQPQPHLQAL 74
Query: 112 PITYDQSH 119
P + SH
Sbjct: 75 PHPHSHSH 82
>At1g26780.1 68414.m03260 myb family transcription factor (MYB117)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 280
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 79 NTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPI-TYDQSHVPQHPQPLT 128
N P++ NH P P P H + T HY QP ++ +H + P+T
Sbjct: 215 NPLKPHLTNNHHPNPNPNYH--SFISTNHYFAQPFPEFNLTHHLVNNAPIT 263
>At1g22335.1 68414.m02794 expressed protein ; expression supported
by MPSS
Length = 139
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 71 GVNIPQQFNTPPPNMRQNHVPGPAPQ-QHQQNLGYTQHYQQQ 111
G P N P P P P HQQ+ Y H QQQ
Sbjct: 24 GATSPSSSNIMPSPYYYLQAPSPRPYLHHQQHYQYHHHQQQQ 65
>At1g07460.1 68414.m00796 legume lectin family protein contains
Legume lectins beta-chain signature, PROSITE:PS00307
Length = 258
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 282 VGATTRIEEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQR 341
VG + + NH +L S P +STP S+ +D ++ P+ P
Sbjct: 176 VGFSASTGNITSNHDVLGWSFSREGKPQDFDLKLLPSLSTPSPSDFDD-LDPIPDPPSDS 234
Query: 342 SP-PPRHVDGMLALC 355
+ P H M+ +C
Sbjct: 235 ATVKPNHTKTMIIIC 249
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.310 0.125 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,572,780
Number of Sequences: 28952
Number of extensions: 346891
Number of successful extensions: 1281
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1229
Number of HSP's gapped (non-prelim): 70
length of query: 405
length of database: 12,070,560
effective HSP length: 83
effective length of query: 322
effective length of database: 9,667,544
effective search space: 3112949168
effective search space used: 3112949168
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 60 (28.3 bits)
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