Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000373-TA|BGIBMGA000373-PA|undefined
(405 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 36 0.044
SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0) 34 0.24
SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.55
SB_20015| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.55
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.72
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 32 0.72
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 32 0.72
SB_22380| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.96
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 32 0.96
SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07) 31 1.3
SB_40632| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 31 1.3
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 31 1.7
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 31 1.7
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 31 2.2
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 31 2.2
SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 3.9
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 30 3.9
SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.9
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 30 3.9
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.9
SB_44796| Best HMM Match : Cornifin (HMM E-Value=1.7) 30 3.9
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_19950| Best HMM Match : AIP3 (HMM E-Value=1.7) 29 5.1
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_19120| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 29 6.7
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 29 8.9
SB_31639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 8.9
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_25887| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 8.9
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_7878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_6709| Best HMM Match : PCNA_C (HMM E-Value=9.8) 29 8.9
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 29 8.9
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 36.3 bits (80), Expect = 0.044
Identities = 19/51 (37%), Positives = 20/51 (39%)
Query: 76 QQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQP 126
QQ PN N +P P Q G YQ QP Y QS Q P P
Sbjct: 577 QQQQPYMPNQMPNQMPNQMPNQMPNQGGPQMGYQMQPAGYQQSGYQQQPTP 627
Score = 30.3 bits (65), Expect = 2.9
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Query: 74 IPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQP-LTQRXX 132
+P + PPP R PG +P+Q+QQ + QQP ++ + P+P +T+
Sbjct: 504 VPHPQHPPPPYQRSASYPGYSPEQYQQ-VPPPHSQMQQP--NQPPNMMKGPRPQMTRNQY 560
Query: 133 XXXXXXXXXRQVALYNGQRMVLTEYKRLQQTPQNIISQQSRETGRQ 178
+ Y Q+ + Q P + +Q + G Q
Sbjct: 561 LQEYMMKRAQMQQHYKQQQQPYMPNQMPNQMPNQMPNQMPNQGGPQ 606
>SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 438
Score = 33.9 bits (74), Expect = 0.24
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 308 PNVMSQTQSSEMSTP-----EKSN-SNDHVNNSPESPGQRSPPPRHVDGMLALCKSCGYT 361
P+++S S S P E S+ S D +N P+SP S P ++D + KS G
Sbjct: 31 PSIVSSCAESTGSLPSPDTVESSHPSEDFSDNDPDSPASSSSKPLYIDCAVCGDKSSG-K 89
Query: 362 GFNFSKCERCKRVF 375
+ CE CK F
Sbjct: 90 HYGVYTCEGCKSFF 103
>SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 32.7 bits (71), Expect = 0.55
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 64 QKHPVTDGVNIPQQFNTPPPNMRQNH-VPG-PAPQQHQQNLGYTQHYQQ 110
Q++P P FN PPP+ VPG P Q ++N+G+ H QQ
Sbjct: 156 QQNPGQFPPTAPPGFNQPPPSFGIGQAVPGQPQGYQQEENVGHASHDQQ 204
>SB_20015| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 32.7 bits (71), Expect = 0.55
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 283 GATTRIEEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQRS 342
G R E ++HP + SSP +QT S + + NNSP +P R
Sbjct: 310 GDVHRRERSRDSHPRP-SSTAGVSSPASGAQTSGSSTRNASTAVTASAGNNSPLAPPSRP 368
Query: 343 PPP 345
PPP
Sbjct: 369 PPP 371
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 308 PNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQRSPPP 345
P S+ Q + S P ++ N H+N P P R P P
Sbjct: 163 PRSESKRQEQQNSKPTETRGNSHLNTLPPVPAHRPPQP 200
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 32.3 bits (70), Expect = 0.72
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 242 LPKESCTLQEVLEQVNVPFSEDTQIQCMQNTSSEIDYFVSVGATTRIEEMLENHPMLLGD 301
+P+E T EV +P +T+++ M+ EI+ V T+I E +E +
Sbjct: 1933 IPEEIET--EVKPMTQIPEEIETEVKPMKQIPEEIE--TEVKPMTQIPEEIETEVKPMTQ 1988
Query: 302 ISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSPE 336
I V TQ+S+ PE N + + PE
Sbjct: 1989 IPEEIETEVKPVTQTSKEIAPEVDNISSSPEHLPE 2023
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 288 IEEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQRS 342
+E E + GD + P + + Q ++ ++ ++DHVN+S ++P S
Sbjct: 1566 LEHSAEGSAIKPGDGKTEQEPKHLEEVQQDSLNLTSEAKNSDHVNSSEQNPSNDS 1620
>SB_22380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 31.9 bits (69), Expect = 0.96
Identities = 31/117 (26%), Positives = 42/117 (35%), Gaps = 5/117 (4%)
Query: 66 HPVTDGVNIPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQ 125
HP+ D + T Q HV Q+ + +H Q Q HV Q
Sbjct: 372 HPLRDRYWKQRHVTTQCHVTIQRHVTTQRQVTTQRQVTTQRHVTIQRHVTTQRHVTTQRQ 431
Query: 126 PLTQRXXXXXXXXXXXRQVALYNGQRMVLTEYKRLQQTPQNIISQQSRETGRQTLVR 182
TQR RQV QR V+T+ R TP+ + +Q+ T R R
Sbjct: 432 VTTQRHVTTRRQVTTQRQVTT---QRQVITQ--RHVTTPRKVTTQRHVTTQRHVTTR 483
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 31.9 bits (69), Expect = 0.96
Identities = 28/110 (25%), Positives = 38/110 (34%), Gaps = 4/110 (3%)
Query: 67 PVTDGVNIPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQP 126
P +N P TPPP RQ G + Q Q QQP Y + QH QP
Sbjct: 128 PSNQVLNGPSSRGTPPPGSRQMDQTGASQQTRQPPRSGPP--VQQP--YGMASSGQHAQP 183
Query: 127 LTQRXXXXXXXXXXXRQVALYNGQRMVLTEYKRLQQTPQNIISQQSRETG 176
+QR Q A G + + + + P + S +G
Sbjct: 184 QSQRPVQSIAGSTATGQHATPTGHGIPPSSTPQARAPPHSSTQPLSSHSG 233
>SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07)
Length = 232
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 318 EMSTPEKSNSNDHVNNSPESPGQRSPP-PRHVDGMLALCKSCGYTGFNFSKC 368
++ TP KS ND N P +PG + PP P+ G + G T N+ +C
Sbjct: 48 QLGTPGKSG-NDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPGTTHVNWKQC 98
>SB_40632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 31.5 bits (68), Expect = 1.3
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 265 QIQCMQNTSSEIDYFVSVGATTRIEEMLENHPMLLGDISSTSSP--NVM--SQTQS-SEM 319
+I C ++T S+ + VS + +I S SP NV+ S+ +S S+
Sbjct: 548 EITCPKDTGSDDEVIVSENTPPSSVSRHRSRSRSRLEIVSKKSPAVNVLCSSRIESPSQQ 607
Query: 320 STPEKSNSNDHVNNSPESP 338
S PE+S +V+N+P+SP
Sbjct: 608 SIPEESLKRSYVSNNPKSP 626
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 48 ANDMDDLEESITAAIVQKHPVTDGVNIPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQH 107
AND D + A + H VT+ + PQ+ P +++ PQ+ +Q
Sbjct: 138 ANDAPDRPQETNDAPERSHEVTNTPDKPQEVTDSPDRLQEEDDAPDRPQEATDESDRSQE 197
Query: 108 YQQQP-ITYDQSHVPQHPQPLT 128
+P +++ + P PQ T
Sbjct: 198 ATDEPDRSHEATDEPDRPQETT 219
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 31.5 bits (68), Expect = 1.3
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 74 IPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQPLTQRXXX 133
+PQQ TP P + P P QQ Q G QQQ + Q PQ + Q+
Sbjct: 1070 VPQQPGTPQPASQPQQKPSPTIQQPPQQ-GQPAQLQQQQLQKPQQQ--SQPQ-IAQQQQL 1125
Query: 134 XXXXXXXXRQVALYNGQRMVLTEYKRLQQTPQNIISQQSRETGRQ 178
+Q + Q+ + +++QQ Q + QQ ++ +Q
Sbjct: 1126 HEMQRQQIQQQQMQQQQQQ--QQQQQIQQQQQQMQQQQLQQQMQQ 1168
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 76 QQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQPLTQ 129
QQ +Q + Q QQ L Q QQQP ++PQ QP TQ
Sbjct: 1136 QQMQQQQQQQQQQQIQQQQQQMQQQQL-QQQMQQQQPPQQMPQNMPQQQQPATQ 1188
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 69 TDGVNIPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHP 124
T G P N PPP R + P P P + + +T P + DQ+ P P
Sbjct: 258 TSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPP 313
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 69 TDGVNIPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHP 124
T G P N PPP R + P P P + + +T P + DQ+ P P
Sbjct: 170 TSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPP 225
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 31.1 bits (67), Expect = 1.7
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Query: 207 NNETPSGPSEQTSEPQSAKMLIFLQNGEQRLVTFTLPKESCTLQEVLEQVNVPFSEDTQI 266
++E PS ++ +S++M +++ L+ F +P +CT N S +
Sbjct: 81 SSEQPSNQKSESWRFKSSRMFVYI------LIAFLVPYVTCTSSS---SSNSSRSSSSSS 131
Query: 267 QCMQNTSSEIDYFVSVGATTRIEEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSN 326
N+SS S + + ++ SS SS N S + SS S+ SN
Sbjct: 132 NSNSNSSSSSSSSSSSSSGSSSSSNSNSNSNSNSSSSSNSSSNSNSNSSSSSNSS---SN 188
Query: 327 SNDHVNNSPES 337
SN N+S S
Sbjct: 189 SNSSSNSSSSS 199
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 30.7 bits (66), Expect = 2.2
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 208 NETPSGPSEQTSEPQSAKMLIFLQNGEQRLVTFTLPKESCTL----QEVLEQVNVPF-SE 262
NET S P TS P + + N EQ+ TF +P ES T +E E V+V F ++
Sbjct: 1614 NETVSVPLRNTSAPLPIRNISVNFNREQQAKTFNVP-ESTTRGWGGREPQENVSVSFRAK 1672
Query: 263 DTQIQCMQNTSS 274
D + QN +
Sbjct: 1673 DNYVIVQQNNQA 1684
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 30.7 bits (66), Expect = 2.2
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 271 NTSSEIDYFVSVGATTRIEEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDH 330
+TS++ D F S+ RIEE + S ++ SQ+ S ST S+S D
Sbjct: 777 STSADADKFCSMNG--RIEEQQPQEGVEENKSESENNQKDNSQSSSPNGST---SSSKDE 831
Query: 331 VNNSPESPGQRSPPPRH 347
++ E P + + PRH
Sbjct: 832 CESTKEKPEKHTSRPRH 848
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 30.7 bits (66), Expect = 2.2
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 64 QKHPVTDGVNIPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQH 123
Q+HP + QQ + P + Q+ + P Q QQN G Q QQQP Q H P
Sbjct: 215 QQHPGQSLLG--QQPQSGPGQLGQS-LQQQLPGQQQQNPGQQQSNQQQP-PQQQQHGPGQ 270
Query: 124 PQPLTQ 129
QP Q
Sbjct: 271 MQPNQQ 276
>SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 294 NHPMLLGDISSTSSPNVMSQTQS-SEMSTPEKSNSNDHVN--NSPESPGQRSPP 344
N P I+S +SPN + T S + ++P NS + N NSP SP + P
Sbjct: 84 NSPNSPNSINSPNSPNSPNSTNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSP 137
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 306 SSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQRSPPPRHV 348
S +V S E+ +P+ S N P+SPG+R PP R+V
Sbjct: 63 SDDSVSLLNDSGELLSPKTSKLEHLTKNRPKSPGRR-PPHRNV 104
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.9 bits (64), Expect = 3.9
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 257 NVPFSEDTQI-QCMQNTSSEIDYFVSVGATTRIEEMLENHPMLLGDISSTSSPNVMSQTQ 315
+VP + D Q+ Q N + D V+ A+ + ++ D+ +TS V +Q+
Sbjct: 903 DVPTASDDQVTQSASNVPTASDNQVTPSASDVLTAKDDHVTPSASDVPTTSDDQV-TQSA 961
Query: 316 SSEMSTPEKSNSNDHVNNSPESPGQRSPPPRHV 348
S ST + + + +P S Q +P P HV
Sbjct: 962 SDVTSTSDNQITPFASDFTPTSDNQVTPSPSHV 994
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 29.9 bits (64), Expect = 3.9
Identities = 22/109 (20%), Positives = 35/109 (32%)
Query: 18 QQNALLSQRSSXXXXXXXXXXXXXXXXXNNANDMDDLEESITAAIVQKHPVTDGVNIPQQ 77
QQ LL Q+ NN + + P + P
Sbjct: 696 QQQQLLQQQQQQQSQMPPQSSQSMTGGQNNTQSLTGQGQGKNQMPSPATPQSMSSEKPSY 755
Query: 78 FNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQP 126
+P P+ + VP P+PQ+ ++G ++Q IT QP
Sbjct: 756 PQSPKPSTGKGAVPSPSPQRPASSMGKPDTIEKQGITPVSESASSTSQP 804
>SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 29.9 bits (64), Expect = 3.9
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 71 GVNIPQQFNTP--PPNMRQN--HVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQ 125
G+ QQ P PP M+Q H+ G + Q QQ + Q QQ+ + Y Q++ Q PQ
Sbjct: 92 GLPQQQQAGMPRHPPQMKQQPAHMMGGSQQASQQYI--MQQQQQRQMQYRQTNAQQVPQ 148
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 321 TPEKSNSNDHVNNSPESPGQRSPP-PRHVDGMLALCKSCGYTGFNFSKC 368
TP KS ND N P +PG + PP P+ G + G T N+ +C
Sbjct: 51 TPGKSG-NDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPGTTHVNWKQC 98
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 321 TPEKSNSNDHVNNSPESPGQRSPP-PRHVDGMLALCKSCGYTGFNFSKC 368
TP KS ND N P +PG + PP P+ G + G T N+ +C
Sbjct: 51 TPGKSG-NDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPGTTHVNWKQC 98
>SB_44796| Best HMM Match : Cornifin (HMM E-Value=1.7)
Length = 165
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Query: 74 IPQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQPLTQR 130
IPQ NT P R P QHQ N QH Y + +PQH TQ+
Sbjct: 12 IPQHNNTAIPQHRTTKTP-----QHQ-NTAKPQHRNTTTPRYHNTAIPQHRDTATQQ 62
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 76 QQFNTPPPNMRQNHVPGPAPQQHQ----QNLGYTQHYQQQ-PITYDQSHVPQ 122
QQ P P+ +Q + P P+ QQ Q Q Y +H QQQ P T + +P+
Sbjct: 216 QQQRHPRPSQQQRY-PRPSQQQRQPRPSQQQRYPRHNQQQTPETQSTTEIPE 266
>SB_19950| Best HMM Match : AIP3 (HMM E-Value=1.7)
Length = 427
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 288 IEEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSP-ESPGQRSPPPR 346
++E+ ++ G + +T + Q+Q++ + + S D + P SPG P R
Sbjct: 73 LDELTDSLSKFSGSVRTTDQQRTLDQSQTAHHTPSVRRGSGDQTDTKPRSSPGAYPPTMR 132
Query: 347 H---VDGMLALCKSCGYTGFNF 365
+ +D +++ + TG F
Sbjct: 133 NSYSLDDVVSALEKSYETGVQF 154
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.1 bits (62), Expect = 6.7
Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 9/136 (6%)
Query: 210 TPSGPSEQTSEPQSAKMLIFLQNGEQRLVTFTLPKESCTLQEV-LEQVNVPFSEDTQIQC 268
TPSG + TS P +A + GE T +PK++ Q ++ P E +
Sbjct: 189 TPSGSTSPTS-PNNASPQSSTRPGE----TTAIPKQTGPTQPPGSTKITTPQHETKPGET 243
Query: 269 MQNTSSEIDYFVSVGATTRIEEMLENHPMLLGDISSTSS-PNVMSQTQSSEMSTPEKSNS 327
+T G T E P G +ST P TQ+ + +T S
Sbjct: 244 TVSTPKAPGPTQPAGTTKNTAPQPETQPE--GTTASTPEVPGPTQPTQTKKTTTKPVSQP 301
Query: 328 NDHVNNSPESPGQRSP 343
+ ++P++PG P
Sbjct: 302 GETTASTPKAPGPTQP 317
>SB_19120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 29.1 bits (62), Expect = 6.7
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 215 SEQTSEPQSAKMLIFLQNGEQRLVTFTLPKESCTLQEVLEQVNVPFSEDTQIQCMQNTSS 274
+E S K+L ++ R+V +T P+++ LE V V F+ ++TS
Sbjct: 713 NENESSWSLFKLLQKMEENRNRIVFWT-PRDNFPRSVSLEAVTVTFAV-----LSKSTSK 766
Query: 275 EIDYFV-SVGATTRIEEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSND--HV 331
E D+F + RI + E GDI +T +P+ + S TPE ++ +
Sbjct: 767 EKDFFDHKLAMDARI--LTER----FGDIMTTFNPSYRLKFTQSTTETPETQSTTETPET 820
Query: 332 NNSPESPGQRS 342
++ E+P +S
Sbjct: 821 QSTTETPENQS 831
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 29.1 bits (62), Expect = 6.7
Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 9/137 (6%)
Query: 214 PSEQTSEPQSAKMLIFLQNGEQRLVTFTLPKESCTLQEVLEQVNVPFSEDTQIQCMQNTS 273
P +Q ++ +S K G+ R + P +S + Q E++ Q +TS
Sbjct: 511 PEQQENQQESGKSGKQPTEGDAREQS---PSQSGSKQPNSEELQSTHQNTPQSSSSSSTS 567
Query: 274 SEIDYFVSVGATTRIEEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNN 333
+ I T+ E P G S SSP + + + + S P N +
Sbjct: 568 N-ISGVDQQKQATQQESQTSVSPQTSGTDQSQSSP--LEKEVAKQESQP---NVSPQSGG 621
Query: 334 SPESPGQRSPPPRHVDG 350
ESP SP P V+G
Sbjct: 622 KQESPANTSPSPERVEG 638
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 75 PQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQ 109
PQQFN PP H+ AP Q +GY Q Q
Sbjct: 579 PQQFNQYPPGYTPPHLT-RAPMGGPQGIGYPQGVQ 612
>SB_31639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 28.7 bits (61), Expect = 8.9
Identities = 27/126 (21%), Positives = 40/126 (31%), Gaps = 6/126 (4%)
Query: 97 QHQQNLGYTQHYQQQPITYDQSHVPQHPQPLTQRXXXXXXXXXXXRQVALYNGQRMVLTE 156
Q QQ Q QQQ Q PQ Q + + +N ++ +
Sbjct: 21 QQQQQKKQQQQPQQQQQQQQQQQQPQQQQQQQPQQQATTTTTTTTSNNSNHNNKQQQQPQ 80
Query: 157 YKRLQQTPQNIISQQSRETGRQTLVRSKEXXXXXXXXXXXXXXXXLSQHENNETPSGPSE 216
++ QQ PQ QQ+ T T + S H NN+ +
Sbjct: 81 QQQ-QQQPQ---QQQATTTTATTTTAT--TTTTTTTSNNNNSNHNNSNHNNNKQQQQQQQ 134
Query: 217 QTSEPQ 222
Q +PQ
Sbjct: 135 QQQQPQ 140
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 306 SSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQRSPP 344
S P++ TQ E + P ++SN + PE PP
Sbjct: 2 SPPSMQPSTQQVEKTAPVSTHSNQEIVEEPEESDNDVPP 40
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 28.7 bits (61), Expect = 8.9
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 80 TPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQP 126
TP P QN P PAP Q Q Q QP S P QP
Sbjct: 725 TPAPTQAQNPAPTPAPTQAQNPAPTPAPTQAQPPV--PSPAPTQAQP 769
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 76 QQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQPLTQR 130
QQ++ P +Q P Q QQ YTQ+YQ Y Q + Q Q+
Sbjct: 849 QQYS-PTATAQQAAYSSPQTTQAQQQAAYTQYYQNYQQQYGQQWSAYYQQQQQQQ 902
>SB_25887| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1378
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 282 VGATTRIEEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHV 331
+G +T IE+ HP+L G SS N + QT TP + D++
Sbjct: 592 IGISTDIEKAFL-HPVLFGSASSPFMLNAVLQTHLDNHKTPVAQDMKDNL 640
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 28.7 bits (61), Expect = 8.9
Identities = 18/71 (25%), Positives = 27/71 (38%)
Query: 96 QQHQQNLGYTQHYQQQPITYDQSHVPQHPQPLTQRXXXXXXXXXXXRQVALYNGQRMVLT 155
QQHQ + + H QQ Y Q H QH Q+ +Q Q+
Sbjct: 286 QQHQLHQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 345
Query: 156 EYKRLQQTPQN 166
+ ++ QQ Q+
Sbjct: 346 QLQQQQQQQQH 356
>SB_7878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/51 (27%), Positives = 19/51 (37%)
Query: 75 PQQFNTPPPNMRQNHVPGPAPQQHQQNLGYTQHYQQQPITYDQSHVPQHPQ 125
P+Q N H+ P PQQ Q + Q Q + Q +P Q
Sbjct: 12 PRQINNQYTQAMPMHIMQPNPQQQQAQVQQVQQQMQSLRVHQQPQMPSQQQ 62
>SB_6709| Best HMM Match : PCNA_C (HMM E-Value=9.8)
Length = 279
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 289 EEMLENHPMLLGDISSTSSPNVMSQTQSSEMSTPEKSNSNDHVNNSPESPGQRSP 343
E + P+ ISSTSS + + SS + P S+S SP SPG +P
Sbjct: 111 EFFFNSAPISNSTISSTSSNSYNKRVSSSSVIMPPSSHS-----RSPNSPGSPNP 160
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 75 PQQFNTPPPNMRQNHVP--GPAPQQHQQNL 102
PQ + PPP +Q P GP PQ+ +L
Sbjct: 857 PQYYGGPPPQQQQQRQPQSGPPPQRQMSDL 886
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.125 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,503,103
Number of Sequences: 59808
Number of extensions: 503879
Number of successful extensions: 1832
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1691
Number of HSP's gapped (non-prelim): 167
length of query: 405
length of database: 16,821,457
effective HSP length: 84
effective length of query: 321
effective length of database: 11,797,585
effective search space: 3787024785
effective search space used: 3787024785
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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