Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000371-TA|BGIBMGA000371-PA|IPR000618|Insect cuticle
protein
(303 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93377-11|CAM84803.1| 332|Caenorhabditis elegans Hypothetical p... 31 1.0
Z81513-15|CAM84808.1| 332|Caenorhabditis elegans Hypothetical p... 31 1.0
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 31 1.3
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 4.1
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 4.1
Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 28 9.5
U55375-6|AAC69046.2| 431|Caenorhabditis elegans Hypothetical pr... 28 9.5
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 28 9.5
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 28 9.5
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 28 9.5
>Z93377-11|CAM84803.1| 332|Caenorhabditis elegans Hypothetical
protein F13A7.14 protein.
Length = 332
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 134 KPSKGRRRQQQETIGPLKSKPSSSTVKPFTITPSQNERISLLPVQENQRNINKRTRERDP 193
+P+ RRR + P PS ++ FT Q E R KR R+R
Sbjct: 73 QPNLKRRRVHLDRSSPENQYPSEDSIYEFTQFTLQKWE------HEESRRQEKRKRKR-- 124
Query: 194 VVPIIESENYIYSHKGNFH 212
V IE ENY+++ NF+
Sbjct: 125 VAERIERENYVHNAMENFN 143
>Z81513-15|CAM84808.1| 332|Caenorhabditis elegans Hypothetical
protein F13A7.14 protein.
Length = 332
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 134 KPSKGRRRQQQETIGPLKSKPSSSTVKPFTITPSQNERISLLPVQENQRNINKRTRERDP 193
+P+ RRR + P PS ++ FT Q E R KR R+R
Sbjct: 73 QPNLKRRRVHLDRSSPENQYPSEDSIYEFTQFTLQKWE------HEESRRQEKRKRKR-- 124
Query: 194 VVPIIESENYIYSHKGNFH 212
V IE ENY+++ NF+
Sbjct: 125 VAERIERENYVHNAMENFN 143
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 30.7 bits (66), Expect = 1.3
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Query: 80 TKEDTSTESLNFKTELKPK-GRSLFDGTVQSVTVANAFKVQVDDTIVGKNRIVTRKPSKG 138
+K+ T+ +S++F + K RS V+ V + V ++ KN+ +K
Sbjct: 446 SKKPTADDSMDFLDFVTAKPDRSEVAAPVEVAKVDESTAVTSENR--KKNKKDKKKSESE 503
Query: 139 RRRQQQETIGPLKSKPSSSTVKPFT-ITPSQNERIS-LLPVQENQRNINKRTRERDPVVP 196
+ ++ P KP++ F ++ ER+ + PVQE + + E +PV
Sbjct: 504 KAVEEPVQAAPTSKKPTADDSMDFLDFVTAKEERVEEVAPVQEQVKEQKNESPESEPVAK 563
Query: 197 IIESEN 202
+I N
Sbjct: 564 LITVSN 569
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 128 NRIVTR-KPSKGRRRQQQETIGPLKSKPSSSTVKPFTITPSQNERISLLPVQENQRNINK 186
NR + R PS GR+ + T S + S K TP E I + QRN
Sbjct: 960 NRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYCKKSKETPMSYEEIEQQKKAKRQRNCKT 1019
Query: 187 R--TRERDPVVPIIESEN 202
R RER + + E E+
Sbjct: 1020 REENRERKRLAQLEELES 1037
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 128 NRIVTR-KPSKGRRRQQQETIGPLKSKPSSSTVKPFTITPSQNERISLLPVQENQRNINK 186
NR + R PS GR+ + T S + S K TP E I + QRN
Sbjct: 960 NRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYCKKSKETPMSYEEIEQQKKAKRQRNCKT 1019
Query: 187 R--TRERDPVVPIIESEN 202
R RER + + E E+
Sbjct: 1020 REENRERKRLAQLEELES 1037
>Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical
protein F44D12.6 protein.
Length = 290
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 133 RKPSKGRRRQQQETIGPL--KSKPSSSTVKPFTITPSQNE 170
RKP + RR +Q T GP+ K S + K + P+Q E
Sbjct: 212 RKPQETPRRSKQRTPGPMMPTQKSSKKSAKERKLEPTQEE 251
>Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical
protein R04F11.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 117 KVQVDDTIVGKNRIVTRKPSKGRRRQQQETIGPLKSKPSSSTVKPFTITPSQNERISLLP 176
KV+ + + K I SK ++ +I P K + + S T ++ S P
Sbjct: 142 KVEKEKSTEQKPTIEPSTSSKSAIETKKSSIAPPKKQGTLSMFSKKTEKKTEKTEKSQSP 201
Query: 177 VQENQRNINKRTRERDPVVPIIESENYIYSHK 208
V ++Q K+ R+R P++ + ESE I + K
Sbjct: 202 VPQDQ---EKKNRKR-PMIEVDESEELIKATK 229
>Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical
protein C01H6.7 protein.
Length = 636
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 117 KVQVDDTIVGKNRIVTRKPSKGRRRQQQETIGPLKSKPSSSTVKPFTITPSQNERISLLP 176
+ + D + K +I+ RK ++ ++++ + P T P PS + S LP
Sbjct: 95 RAPLTDYHLKKKKILARKAARDAEKEKEVEPEVQEEVPKEPTPPPPRKAPSFS---SYLP 151
Query: 177 VQENQRNINKRTRERDP 193
+Q Q +I ++ E+DP
Sbjct: 152 IQLMQDHILRKLVEKDP 168
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 26 RTIAAYNFNHPPNVDYNPLPVDVVYEQKKLEEKSSDD 62
R +A Y HPP ++ P V E++K ++K DD
Sbjct: 454 RNVADYVEAHPPPLEMFKAPPKVEIEKEKEKDKDEDD 490
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 219 DGTKAFEQGE----LRRFDDDTAGETVSGSFSYKDRDGNDFSLSYTADENGY 266
DG+ + GE ++R + + E + +F DRDGN F TADE Y
Sbjct: 83 DGSGTIDFGEFCQMMKRMNKENDSEMIREAFRVFDRDGNGF---ITADEFRY 131
>U55375-6|AAC69046.2| 431|Caenorhabditis elegans Hypothetical
protein K03E6.7 protein.
Length = 431
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 12 SLASSDNSSQDEGFRTIAAYNFNHPPNVDYNPLPVDVVYEQKKLEEKSSDDVI 64
S SSD Q F++ + N PP P P YE K + +K D ++
Sbjct: 260 SAVSSDQEDQKSDFKSSESLPGNPPPYAPTAPPP----YEDKYIIDKDDDSIV 308
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 107 VQSVTVANAFKVQVDDTIVGKNRIVTRKPSKGRRRQQQETIGPLKSKPSSSTVKPFTITP 166
+Q V N + ++D+ ++ +V P K + E LK + SSS V T+
Sbjct: 422 IQCFPVINRYSKRLDEFLICTVFLVNNLPKKILAQDFVEESRVLKPEGSSSAVSSTTVLE 481
Query: 167 SQNERIS 173
+++IS
Sbjct: 482 ESHQKIS 488
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 107 VQSVTVANAFKVQVDDTIVGKNRIVTRKPSKGRRRQQQETIGPLKSKPSSSTVKPFTITP 166
+Q V N + ++D+ ++ +V P K + E LK + SSS V T+
Sbjct: 424 IQCFPVINRYSKRLDEFLICTVFLVNNLPKKILAQDFVEESRVLKPEGSSSAVSSTTVLE 483
Query: 167 SQNERIS 173
+++IS
Sbjct: 484 ESHQKIS 490
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 219 DGTKAFEQGE----LRRFDDDTAGETVSGSFSYKDRDGNDFSLSYTADENGY 266
DG+ + GE ++R + + E + +F DRDGN F TADE Y
Sbjct: 83 DGSGTIDFGEFCQMMKRMNKENDSEMIREAFRVFDRDGNGF---ITADEFRY 131
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.311 0.130 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,343,351
Number of Sequences: 27539
Number of extensions: 325979
Number of successful extensions: 755
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 748
Number of HSP's gapped (non-prelim): 15
length of query: 303
length of database: 12,573,161
effective HSP length: 81
effective length of query: 222
effective length of database: 10,342,502
effective search space: 2296035444
effective search space used: 2296035444
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
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