Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000371-TA|BGIBMGA000371-PA|IPR000618|Insect cuticle
protein
(303 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24225| Best HMM Match : TF_Otx (HMM E-Value=7.2) 33 0.38
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 31 1.5
SB_31102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 29 3.6
SB_39538| Best HMM Match : VWA (HMM E-Value=0) 29 3.6
SB_33075| Best HMM Match : Big_2 (HMM E-Value=1.7) 29 3.6
SB_21621| Best HMM Match : FKBP_N (HMM E-Value=7.3) 29 3.6
SB_36407| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_30915| Best HMM Match : cNMP_binding (HMM E-Value=6.3e-10) 28 8.2
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_57442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 28 8.2
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_22824| Best HMM Match : Herpes_gI (HMM E-Value=1.8) 28 8.2
>SB_24225| Best HMM Match : TF_Otx (HMM E-Value=7.2)
Length = 205
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 107 VQSVTVANAFKVQVDDTIVGKNRIVTRKPSKGRRRQQQETIGPLKSKPSSSTVKPFTITP 166
+Q+ ++ + K D I+ + + P K +RQ Q+ + P+++ P S+++KP T +
Sbjct: 110 IQTAPISTSIKPHTDGAIINQQQA----PYK--QRQYQQALSPIQTAPISTSIKPHTNSA 163
Query: 167 SQNE 170
+ N+
Sbjct: 164 NINQ 167
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 139 RRRQQQETIGPLKSKPSSSTVKPFT 163
+RRQ Q+ + P+++ P S+++KP T
Sbjct: 62 KRRQYQQALSPIQTAPISTSIKPHT 86
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
Query: 80 TKEDTSTESLNFKTELKPKGRSLFDGTVQSVTVANAFKVQVDDTIVGKNRIVTRKPSKGR 139
T+E+ E + KTE KP R + + V V+ + K KP R
Sbjct: 5720 TREEKKVEEVKPKTE-KPTEREAKPLKEKPLVEEKELTVSVEKAVEEKP---LEKPIT-R 5774
Query: 140 RRQQQETIGPLKSKPSSSTVKPFTITPSQNERISLLPVQENQ 181
+ ++ E + P K KP+ KP + P E+ LPV Q
Sbjct: 5775 KEKKVEEVKPKKEKPTEREAKPREVKPFVEEK--ELPVSAGQ 5814
Score = 28.3 bits (60), Expect = 8.2
Identities = 33/135 (24%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 37 PNVDYNPLPVDVVYEQKKLEEKSSDDVITTTXXXXXXXXXXXXTKEDTSTESLNFKTELK 96
P V+ LPV +K +EEK ++ T+E+ E L K E K
Sbjct: 5906 PLVEEKELPVSA---EKAVEEKELP--VSAKKAVEEKPLEKPITREEKKVEELKPKKE-K 5959
Query: 97 PKGRSLFDGTVQSVTVANAFKVQVDDTIVGKNRIVTRKPSKGRRRQQQETIGPLKSKPSS 156
R V+ + V T+ K KP R+ ++ E + P K KP+
Sbjct: 5960 ATEREAKPREVKPLVEEKELPVSAGQTVEEKP---LEKPI-ARKEKKVEEVQPKKEKPTE 6015
Query: 157 STVKPFTITPSQNER 171
KP P E+
Sbjct: 6016 REAKPLEEKPLVEEK 6030
>SB_31102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 133 RKPSKGRRRQQQETIG-PLKSKPSSSTVKPFTI--TPSQNERISLLPVQENQRNINKR 187
++ KGR ++ + PL S PS S PF I TP N S +P RN+ +R
Sbjct: 77 KESGKGRSKETDAQLRTPLPSPPSESPSTPFGILPTPPTNTPKSRIPRPFPWRNVKRR 134
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 132 TRKPSKGRRRQQQETIGPLKSKPSSSTVKPFTITPSQ 168
T +PS+ + Q I P +KP+ ST P +PS+
Sbjct: 740 TTRPSEATAKPQATAIPPATTKPTGSTQSPTDNSPSE 776
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 121 DDTIVGKNRIVTRKPSKGRRRQQQETIGPLKSKPSSSTV----KPFTITPSQNERISLLP 176
++T+ G + V + +QE IGP K+KP + T KP Q + +
Sbjct: 179 ENTLPGDKKAVKSNNGSTKLANKQENIGPNKTKPDAKTPANANKPGKEITKQTKTLEESE 238
Query: 177 VQENQR-NINKRTRERDPVVPI----IESENYIY-SHKGNFHYSYEGGDGTKAFEQG 227
+ + R ++ ++ + RD I I +N+ + + GNF + + F G
Sbjct: 239 IGTDIRASVKEKEKNRDKTQSIDCSSIAPDNFTFTAPTGNFKFKPLSPSSAEGFFSG 295
>SB_39538| Best HMM Match : VWA (HMM E-Value=0)
Length = 3208
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 104 DGTVQSVTVANAFKVQVDDTIVGKNRIVTRKPSKGRRRQQQETIGPLKSKPSSSTVKPFT 163
DG + +N V + + G ++ + K +GR + P SK S+T PF
Sbjct: 577 DGIASTPADSNVLTVASYNDLPGISQTLINKIEEGRTEFLKPQSTPSTSKEQSTTPSPFA 636
Query: 164 ITPSQNE-RISLLPVQENQRNINKRTR 189
+ N+ +I+ QE + +N+ +
Sbjct: 637 VNQMVNQLQINREINQEASQEVNREIK 663
>SB_33075| Best HMM Match : Big_2 (HMM E-Value=1.7)
Length = 334
Score = 29.5 bits (63), Expect = 3.6
Identities = 25/130 (19%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 86 TESLNFKTELKPKGRSLFDGTVQSVTVANAFKVQVDDTIVGKNRIVTRKPSKGRRRQQQE 145
T S + +++PKG F + V +AN+F + T + + + K + G+ + +
Sbjct: 13 TNSQSAIIQVEPKGTPSFRDVARQVLIANSFTRR--KTPSTTSSLASSKRNNGKEKTNEV 70
Query: 146 TIGPLKSKPSSSTVKPFTITPSQN----ERISLLPVQENQRNINKRTRERDPV-VPIIES 200
P + + + P + + ++ LLP +E +++ + T+ R + +I
Sbjct: 71 IRPPSVKRRGTPEIFPMSSEMKKTLLLLGKMDLLPEEEEKKHKSATTKFRQKTRMRVINP 130
Query: 201 ENYIYSHKGN 210
+ +I S K +
Sbjct: 131 QRFIRSMKSS 140
>SB_21621| Best HMM Match : FKBP_N (HMM E-Value=7.3)
Length = 272
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 7/120 (5%)
Query: 49 VYEQKKLEEKSSDDVITTTXXXXXXXXXXXXTKEDTSTESLNFKTELKPKGRSLFDGTVQ 108
+Y KK +S+D I TT E+ S+ KTE K K + L +
Sbjct: 82 LYTNKKAVPVASEDAIATTSITGSHLAMTAMQSEEEPGASMGHKTERK-KAKELKEMKKA 140
Query: 109 SVTV-----ANAFKVQVDDTIVGKNRIVTRKPSKGRRRQQQE-TIGPLKSKPSSSTVKPF 162
+T+ N + + ++R+ +G +Q +E + P +++ + KPF
Sbjct: 141 GLTLRPPPHRNTMEDDDGHKVSDRSRMKGTMGEQGSDKQAKESSYSPCQNRVNPEVSKPF 200
>SB_36407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 150 LKSKPSSSTVKPFTITPSQNERISLLPVQENQR-NINKRTRERDPVVPIIESE 201
LKSKP++ T + + PSQN R+SL+ + + R I + P+ E +
Sbjct: 276 LKSKPNTRTSSSY-MGPSQNRRLSLMQLLQAMRGTIGSALTPNTRLTPVDEEQ 327
>SB_30915| Best HMM Match : cNMP_binding (HMM E-Value=6.3e-10)
Length = 673
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 151 KSKPSSSTVKPFTITPSQNERISLLPVQENQ-RNINKRTRERDPVVPIIESENYIYSHKG 209
KS+PS S P+TI+ + N +S + + R+++ R PII E Y+ +
Sbjct: 477 KSEPSPSGPSPWTISLAANRWMSSVRKKRAMVRSMSDRRSSSPSPTPIIVIEEYVATSDS 536
Query: 210 N 210
N
Sbjct: 537 N 537
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 134 KPSKGRRRQQQETIGPLKSKPSSSTVKPFTITPSQNERISLLPVQENQRNINKRTRERDP 193
KP R RQ +++ P+ + +S+ T+T + E + + ++N N + + E
Sbjct: 366 KPRSSRLRQLRDSPAPIDLEMDNSSETADTVTSGEKEEPTNMNDEDNDENKKENSPEEQQ 425
Query: 194 VVP 196
P
Sbjct: 426 QTP 428
>SB_57442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 4 LFCLLVVTSLASSDNSSQDEGFR 26
LF +LV++ LAS NS+Q FR
Sbjct: 128 LFAMLVMSDLASKPNSAQSSAFR 150
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 135 PSKGRRRQQQETIGPLKSKPSSSTVKPFTITPSQNERISLLPVQENQRNINKR 187
P +++ T GP K+KP++ +P T P++ LLP +E + +R
Sbjct: 395 PEVESAEEERATPGPTKAKPTTIKRRP-TERPTKKTTKPLLPEEEEEEEEEER 446
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 133 RKPSKGRRRQQQETIGPLKSKPSSSTVKPFTITPSQNERISLLPVQENQRNINKRTRERD 192
+K S G+R+ +E K+ P+ +T FT P QN S + + + R +
Sbjct: 1151 KKSSIGKRKVAREGPSQSKASPTLTTRSNFTTRPDQNNSWSQCGLLSSPTTTSPAKRRKT 1210
Query: 193 P 193
P
Sbjct: 1211 P 1211
>SB_22824| Best HMM Match : Herpes_gI (HMM E-Value=1.8)
Length = 1255
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 4 LFCLLVVTSLASSDNSSQDEGFR 26
LF +LV++ LAS NS+Q FR
Sbjct: 22 LFAMLVMSDLASKPNSAQSSAFR 44
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.130 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,807,509
Number of Sequences: 59808
Number of extensions: 416575
Number of successful extensions: 797
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 770
Number of HSP's gapped (non-prelim): 34
length of query: 303
length of database: 16,821,457
effective HSP length: 82
effective length of query: 221
effective length of database: 11,917,201
effective search space: 2633701421
effective search space used: 2633701421
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -