Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000370-TA|BGIBMGA000370-PA|undefined
(73 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 25 1.6
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 24 2.8
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 23 3.7
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 23 3.7
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 23 4.9
SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 23 6.5
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 23 6.5
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 23 6.5
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 22 8.6
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 22 8.6
SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr ... 22 8.6
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 24.6 bits (51), Expect = 1.6
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 33 EYDKDGKLVNRVMMYNLQDVASFIENYLNPEICY 66
E + +L +++M N+ +E YL E CY
Sbjct: 230 EISQQAELFSKIMAQNVLMAKPALEKYLYHEFCY 263
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 23.8 bits (49), Expect = 2.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 3 LPAPLRRVLIINGENFLRSKP 23
LP RRV+IIN + RS+P
Sbjct: 2047 LPGLSRRVMIINSNDPSRSRP 2067
>SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1021
Score = 23.4 bits (48), Expect = 3.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 18 FLRSKPKKVENLCYEEYDKDGKLVNRVMMYNLQDV 52
F++ PK + Y E KDG++V + + L+ V
Sbjct: 975 FMKKLPKSSKEAAYLENLKDGEIVAPISVSRLKMV 1009
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 23.4 bits (48), Expect = 3.7
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 51 DVASFIENYLNPE 63
D AS+I NYL PE
Sbjct: 90 DSASYIRNYLGPE 102
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 23.0 bits (47), Expect = 4.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 16 ENFLRSKPKKVENLCYEEYDK 36
E FL+ +P ++ YE+YDK
Sbjct: 1071 EQFLQEQPLPIKLNPYEKYDK 1091
>SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 22.6 bits (46), Expect = 6.5
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 29 LCYEEYDK 36
+CYEEYDK
Sbjct: 16 ICYEEYDK 23
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 22.6 bits (46), Expect = 6.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 21 SKPKKVENLCYEEYDKDGKLVNR--VMMYNLQDVASFI 56
SK KK+ENL + KD +VN V+M ++ ++ S +
Sbjct: 835 SKKKKIENLSTVQKPKD-SVVNTPDVIMSSVDEIPSSV 871
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 22.6 bits (46), Expect = 6.5
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 38 GKLVNR-VMMYNLQDVASFIENYLNPEICYGKCVSGH 73
G+ V R V++ + + + S++E+ N EI C GH
Sbjct: 377 GRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDEGH 413
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 22.2 bits (45), Expect = 8.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 26 VENLCYEEYDKDGKLVNRVMMYNLQDVASFIENYLN 61
+ N + YD+ L N+ + QDVAS + L+
Sbjct: 333 IANTPFLAYDRSPSLTNQEAESSFQDVASISPHSLS 368
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 22.2 bits (45), Expect = 8.6
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Query: 42 NRVMMYNLQDVASF---IENYLN 61
NRV +YNL+D S+ EN+ N
Sbjct: 35 NRVSVYNLKDNTSYTFPFENHKN 57
>SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 339
Score = 22.2 bits (45), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 47 YNLQDVASFIENY 59
YN D+ASF+E Y
Sbjct: 52 YNFHDLASFLEVY 64
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.140 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,989
Number of Sequences: 5004
Number of extensions: 13358
Number of successful extensions: 32
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 11
length of query: 73
length of database: 2,362,478
effective HSP length: 53
effective length of query: 20
effective length of database: 2,097,266
effective search space: 41945320
effective search space used: 41945320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)
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