GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000370-TA|BGIBMGA000370-PA|undefined
         (73 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   1.0  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   1.8  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    20   2.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   2.3  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    19   4.1  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    19   4.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    19   4.1  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    19   5.4  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    18   9.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    18   9.4  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 10  VLIINGENFLRSKPKKVENLCYE 32
           +LII G + + S  +K   +CY+
Sbjct: 226 ILIIMGCDVVASNSRKTAEMCYK 248


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
          protein 13 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 14 NGENFLRSKPKKVENLCYEEYDKDGKLVNRVMMY 47
          +GE   +  P  ++N C +  DK  + + +V+ Y
Sbjct: 54 SGEELKKDIPDALKNECAKCNDKHKEGIRKVIHY 87


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
          protein 14 protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 9/37 (24%), Positives = 21/37 (56%)

Query: 15 GENFLRSKPKKVENLCYEEYDKDGKLVNRVMMYNLQD 51
          GE   R  P+ ++N C +  +K  + V +V+ + +++
Sbjct: 57 GEELKRDIPEALQNECAKCNEKHKEGVRKVLHHLIKN 93


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)

Query: 48  NLQDVASFIENYLNPEI 64
           +L+DV   ++  LNP++
Sbjct: 369 SLKDVIEIVDKLLNPDL 385


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 15  GENFLRSKPKKVENLCYEEYDKDGKLVNRVMMYNLQDVASF---IENYLNPEICYGK 68
           GE   +  P+ ++N C +  +K  + V +V+ + +++  ++   +E+  +P+  Y K
Sbjct: 57  GEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHLIENKPNWWQELESKFDPQGEYKK 113


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 15  GENFLRSKPKKVENLCYEEYDKDGKLVNRVMMYNLQDVASF---IENYLNPEICYGK 68
           GE   +  P+ ++N C +  +K  + V +V+ + +++  ++   +E+  +P+  Y K
Sbjct: 57  GEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHLIENKPNWWQELESKFDPQGEYKK 113


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 16  ENFLRSKPKKVENLCY 31
           ENFL+ + +K E+  Y
Sbjct: 340 ENFLQCQDEKFESFVY 355


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
          protein 17 protein.
          Length = 124

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 15 GENFLRSKPKKVENLCYEEYDKDGKLVNRVMMYNLQDVASF 55
          GE   +  P  ++N C +  +K  + V +V+ + +++  S+
Sbjct: 56 GEELKKDIPDALQNECAKCNEKHKEGVRKVIRHLIKNKPSW 96


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
          protein protein.
          Length = 135

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 28 NLCYEEYDKDGKL 40
          NL  EE+D+ G+L
Sbjct: 34 NLIKEEFDELGRL 46


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 19  LRSKPKKVENLCYEEYDKDGKLVNRVMMYN 48
           L  K  K+  + YE +    +L +  + YN
Sbjct: 145 LNLKGNKIATIAYETFQNLPELEDLDLAYN 174


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.140    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,952
Number of Sequences: 317
Number of extensions: 727
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 73
length of database: 114,650
effective HSP length: 45
effective length of query: 28
effective length of database: 100,385
effective search space:  2810780
effective search space used:  2810780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.0 bits)
S2: 35 (18.2 bits)