GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000370-TA|BGIBMGA000370-PA|undefined
         (73 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              20   2.7  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     20   2.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   4.7  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    19   8.2  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 20.2 bits (40), Expect = 2.7
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 10 VLIINGENFLRSKPKKVENLCYEEYDKDGKLVNRV 44
          +L ++ E+   +K +K+E++C EE   D K  + V
Sbjct: 15 ILAVSEESI--NKLRKIESVCAEENGIDLKKADDV 47


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 20.2 bits (40), Expect = 2.7
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 24  KKVENLCYEEYDKDGKLVNRVMMYNLQDVASFIENYL 60
           +++  L  E   +   +    +    +D+ASF+EN L
Sbjct: 154 EEIRTLLDESIQRKSDITELDVSKRCKDLASFMENLL 190


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 19.4 bits (38), Expect = 4.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 8    RRVLIINGENFLRSKPKKVE 27
            RRVLI+   NFL ++  + E
Sbjct: 1125 RRVLIVLTRNFLLTEWSRFE 1144


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
          carboxykinase protein.
          Length = 118

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 27 ENLCYEEYDKDGKLVNRVMMYNLQDVASFIENYLNP 62
          +++ + ++DK+G+L      Y    VA    +  NP
Sbjct: 44 DDIAWMKFDKEGRLRAINPEYGFFGVAPGTSSATNP 79


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.140    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,686
Number of Sequences: 429
Number of extensions: 801
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 73
length of database: 140,377
effective HSP length: 46
effective length of query: 27
effective length of database: 120,643
effective search space:  3257361
effective search space used:  3257361
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.5 bits)
S2: 36 (18.6 bits)