Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000369-TA|BGIBMGA000369-PA|IPR000618|Insect cuticle
protein
(115 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0284 + 21909758-21913645 31 0.17
04_04_0936 + 29512562-29512576,29513009-29513336,29514117-295142... 29 1.2
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 28 1.6
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 28 1.6
12_02_0854 + 23697826-23698033,23699111-23699276,23699430-236994... 28 2.1
04_04_0442 - 25229186-25229568,25229740-25232671 28 2.1
12_01_0022 + 165056-165408,165477-165624,166248-166248,166305-16... 27 2.8
07_03_1049 + 23566140-23566403,23567453-23567525,23567591-235677... 27 3.6
09_06_0080 + 20736778-20737005,20737104-20737482,20737572-207376... 26 6.4
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 26 6.4
05_03_0043 - 7702940-7703077,7703361-7703420,7703562-7703612,770... 26 6.4
03_05_0127 + 21069312-21069668,21070023-21072830,21072975-21073178 26 6.4
07_03_1094 + 23919878-23920520,23921297-23921363,23921364-239214... 26 8.4
05_04_0132 + 18303925-18307164 26 8.4
03_01_0530 + 3971990-3972331,3972415-3972489,3972608-3972661,397... 26 8.4
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 26 8.4
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 18 QEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTD 69
+E QN +G+K E K+D + D D +Y+ D +E+ +Y +D D
Sbjct: 492 EEGQNEEKEGRKEVGEEEKEDDDDDYDD-DDDYDDDDYDDNEEEKKYDDDDD 542
>04_04_0936 +
29512562-29512576,29513009-29513336,29514117-29514245,
29514451-29514965
Length = 328
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 31 PVEIVKQDSEVDVDGYKFEYET-SDGTSRQEQ--GEYKNDTDQQGL 73
P + K++S D Y+FEYE S G+ Q + GE D +GL
Sbjct: 151 PSLVEKEESTDDESNYEFEYEVLSHGSDEQWEFIGESSTSRDLEGL 196
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 62 GEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVADKNGYQPTEQNG 107
G+ K TD +G+L Y A DG+ S + K+ + ++NG
Sbjct: 121 GDPKTSTDNEGILCEEEDSYAADDGKDNGYSRIC-KDAHTSRKRNG 165
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 15 VCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLL 74
V ++ A+ P G + E V+QD E E+ DG + +E+ E + + L
Sbjct: 136 VQSKPAEPEPEPGTELEEEEVEQDQEEKEAELPMPEESGDGKAPEEESEKAPELELDELS 195
Query: 75 VRGSYKYVAPDGQQ 88
Y A +GQ+
Sbjct: 196 EGDGYGEEAEEGQK 209
>12_02_0854 +
23697826-23698033,23699111-23699276,23699430-23699466,
23699531-23700145
Length = 341
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 13 AIVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQG 72
A A P +G+K P D + + SD S +E+ EY ++ +Q+G
Sbjct: 11 AAAAAAATSTDPGRGRKRPPSPSTPTPSDDGEDSDDGWAVSDSGSEEEEEEYDDEEEQEG 70
Query: 73 L 73
+
Sbjct: 71 M 71
>04_04_0442 - 25229186-25229568,25229740-25232671
Length = 1104
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 29 KAPVEIVK--QDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGS----YKYV 82
+ P+E V QD ++ G + T D + QE N+ D+ ++ RG+ Y+ +
Sbjct: 765 RKPLETVAPLQDKQIFSAGSNMQVSTKDAYTFQELVSATNNFDESCVIGRGACGTVYRAI 824
Query: 83 APDGQQISVSFVADKNGYQPTEQN 106
GQ I+V +A T+ +
Sbjct: 825 LKAGQTIAVKKLASNREGSNTDNS 848
>12_01_0022 +
165056-165408,165477-165624,166248-166248,166305-166602,
166819-167387,167554-168377
Length = 730
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 10 AALAIVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDG 55
AA A A EA P Q A E ++D + D D Y ++ +T G
Sbjct: 399 AAEAAARAAEAAARPSQAAAAEAEEEEEDDDDDEDEYPWQCQTRAG 444
>07_03_1049 +
23566140-23566403,23567453-23567525,23567591-23567742,
23567835-23568524,23568643-23568869,23569118-23569208
Length = 498
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 38 DSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGL 73
D + D D + E+E +G +E G Y+ D D GL
Sbjct: 60 DHDEDEDDDEAEFEFEEGEEEEEDG-YETDDDLSGL 94
>09_06_0080 +
20736778-20737005,20737104-20737482,20737572-20737615,
20738491-20738612,20738701-20738809,20738933-20739046
Length = 331
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 37 QDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVAD 96
+ SE + +G+ EY+ + + EY++D L + VA + ++++ ++D
Sbjct: 145 EGSEFEEEGFDEEYDEEEVEPELDPAEYEDDEAYARALQDAEEREVA--ARLMALAGISD 202
Query: 97 KNGYQPTEQNGTQQQ 111
+P E++ Q
Sbjct: 203 WRPVEPVEEHANDPQ 217
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 33 EIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQG 72
+ V + EV+ D + EY DG S ++ E + D D +G
Sbjct: 226 DFVADEEEVE-DTKEDEYTDEDGDSDDDEDEGEEDDDDEG 264
>05_03_0043 -
7702940-7703077,7703361-7703420,7703562-7703612,
7705355-7705408,7707260-7707325,7707552-7707629,
7708568-7708970,7710492-7710493,7711076-7711078
Length = 284
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 57 SRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVADKNGYQPTEQNG 107
S Q K ++ G + ++ V+P G+ +S ++ D NG P QNG
Sbjct: 154 SSSAQSTLKVRKERLGDRITALHQIVSPFGKALSYPYMGDANGTGPM-QNG 203
>03_05_0127 + 21069312-21069668,21070023-21072830,21072975-21073178
Length = 1122
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 7 FVLAALAIVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEY 50
F+ A I+C Q + PP G+ + I+ + DV+ + E+
Sbjct: 816 FMHLAKIILCQQSCKFLPPLGELPRLRILSMECMTDVEHVRQEF 859
>07_03_1094 +
23919878-23920520,23921297-23921363,23921364-23921453,
23922220-23922284,23922372-23922470,23922851-23922992,
23923100-23923139
Length = 381
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 9 LAALAIVCAQEAQNAPPQGQKAPVEIVKQDSEVD 42
L A A EA+++PP+ ++A + K SE D
Sbjct: 193 LPAAATTAGDEAESSPPEAKRARLISNKNRSETD 226
>05_04_0132 + 18303925-18307164
Length = 1079
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 33 EIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDG 86
E ++S+ DG++ +Y + Q++GE DT + G G+ + DG
Sbjct: 828 EDAHEESDPTQDGHEEDYSVGINSGAQKEGEL--DTSESGGASEGTTVHQEDDG 879
>03_01_0530 +
3971990-3972331,3972415-3972489,3972608-3972661,
3972747-3972825,3972927-3973054,3973178-3973261,
3973344-3973427,3973518-3973669,3973810-3973960,
3974675-3974746,3975708-3975749
Length = 420
Score = 25.8 bits (54), Expect = 8.4
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 42 DVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVADKNGYQ 101
+++G E ET D + +QGL + G YV G Q +V FV+ +N Y
Sbjct: 295 EMEGVLLEAETGDYLGTHRGFWFYTIGQRQGLRLPGGPWYVVEKGVQNNVVFVS-RNYYS 353
Query: 102 PTEQNGT 108
++ T
Sbjct: 354 LDKRRRT 360
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 17 AQEAQNAPPQGQKAP 31
+Q + APPQGQKAP
Sbjct: 627 SQGSYGAPPQGQKAP 641
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.308 0.126 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,450,651
Number of Sequences: 37544
Number of extensions: 136670
Number of successful extensions: 320
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 314
Number of HSP's gapped (non-prelim): 17
length of query: 115
length of database: 14,793,348
effective HSP length: 73
effective length of query: 42
effective length of database: 12,052,636
effective search space: 506210712
effective search space used: 506210712
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 54 (25.8 bits)
- SilkBase 1999-2023 -