Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000369-TA|BGIBMGA000369-PA|IPR000618|Insect cuticle
protein
         (115 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    31   0.008
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   1.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    22   4.8  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    22   4.8  
AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.      22   6.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    21   8.4  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 31.5 bits (68), Expect = 0.008
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 25  PQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAP 84
           P+ +  P   V+++  V V        T D  S+QE         + G +V+GSY  V P
Sbjct: 7   PRSRTRPARGVRREPAVLVLVRHLGALTGDSKSQQES--------RDGDVVQGSYSVVDP 58

Query: 85  DGQQISVSFVAD-KNGY 100
           DG + +V + AD  NG+
Sbjct: 59  DGTKRTVDYTADPHNGF 75


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/52 (15%), Positives = 25/52 (48%)

Query: 20  AQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
           +Q  PP       +   +  ++  + Y+ +++      +Q+Q +++++  QQ
Sbjct: 872 SQALPPHSMHTDCDYEPESHKLLAENYRQQHQQQQQQQQQQQQQHEHEQQQQ 923


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 97   KNGYQPTEQNGTQQQPAQA 115
            K+ YQ    +GT+Q P +A
Sbjct: 1447 KSSYQQQPDSGTEQAPREA 1465


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 73  LLVRG-SYKYVAPDGQQISVSFVADKNGYQPTEQNGTQQQPAQA 115
           LLV G S+     DGQ      V  K G    +  G QQQ +Q+
Sbjct: 123 LLVSGASFDPEGDDGQGSFAEVVRHKWGRNTGKPRGYQQQQSQS 166


>AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.
          Length = 73

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 2  MKTTLFVLAALAIVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQ 61
          M + LFVLA L +      Q+AP   Q A  ++   D E D D    +  +S  +   E+
Sbjct: 1  MASKLFVLAFLCLALVVVVQSAP---QYARGDVPTYDEE-DFDEESLKPHSSSSSDDGEE 56


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 8   VLAALAIVCAQEAQNAPPQGQKAPV 32
           +L+  A V A+   +AP  G+K PV
Sbjct: 135 LLSHNAFVLARPNLSAPASGEKVPV 159


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.308    0.126    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,083
Number of Sequences: 2123
Number of extensions: 5530
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 6
length of query: 115
length of database: 516,269
effective HSP length: 56
effective length of query: 59
effective length of database: 397,381
effective search space: 23445479
effective search space used: 23445479
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 43 (21.4 bits)