BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000369-TA|BGIBMGA000369-PA|IPR000618|Insect cuticle
protein
(115 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063578-1|AAH63578.1| 584|Homo sapiens SRCAP protein protein. 29 2.6
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 29 2.6
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 29 2.6
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 29 2.6
AF053356-3|AAC78792.1| 817|Homo sapiens ORF2 protein. 29 3.4
AY505489-1|AAS48457.1| 181|Homo sapiens MHC class I antigen pro... 28 8.0
AY061759-1|AAL33802.1| 3270|Homo sapiens nesprin-2 gamma protein. 28 8.0
AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein. 28 8.0
AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein. 28 8.0
AB023228-1|BAA76855.3| 3541|Homo sapiens KIAA1011 protein protein. 28 8.0
>BC063578-1|AAH63578.1| 584|Homo sapiens SRCAP protein protein.
Length = 584
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 19 EAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
EA+ P + + + V+ SE + D + E ETS G+S E+ E + D Q
Sbjct: 484 EAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETS-GSSASEESESEESEDAQ 535
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens
cDNA FLJ46149 fis, clone TESTI4000621, moderately
similar to Homo sapiens Snf2-related CBP activator
protein (SRCAP). ).
Length = 2427
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 19 EAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
EA+ P + + + V+ SE + D + E ETS G+S E+ E + D Q
Sbjct: 484 EAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETS-GSSASEESESEESEDAQ 535
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 19 EAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
EA+ P + + + V+ SE + D + E ETS G+S E+ E + D Q
Sbjct: 287 EAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETS-GSSASEESESEESEDAQ 338
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 19 EAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
EA+ P + + + V+ SE + D + E ETS G+S E+ E + D Q
Sbjct: 465 EAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETS-GSSASEESESEESEDAQ 516
>AF053356-3|AAC78792.1| 817|Homo sapiens ORF2 protein.
Length = 817
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 22 NAPPQG--QKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKND 67
+AP G QK P E + ++ E+D G + E E S+G +E+G +D
Sbjct: 229 SAPHPGPMQKGPKEPIPEEQELDFQGLEEEEEPSEGL--EEEGPEADD 274
>AY505489-1|AAS48457.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 27 GQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDG 86
G+ V+ Q VD+ + Y S+ S Q Y D G +RG ++Y A DG
Sbjct: 61 GETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDGRFLRGYHQY-AYDG 119
Query: 87 Q 87
+
Sbjct: 120 K 120
>AY061759-1|AAL33802.1| 3270|Homo sapiens nesprin-2 gamma protein.
Length = 3270
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 29 KAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQ 88
KA V + Q + + +G E + + +E G + D ++ L RGS Y+A ++
Sbjct: 446 KATVLNLHQHLKQEQEGV--ERDRLPAVTSEEGGVAERDASERKLNRRGSMSYLAAVEEE 503
Query: 89 ISVSFVADKNGYQPTE 104
+ S V NG + E
Sbjct: 504 VEESSVKSDNGDEKAE 519
>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
Length = 6884
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 29 KAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQ 88
KA V + Q + + +G E + + +E G + D ++ L RGS Y+A ++
Sbjct: 4060 KATVLNLHQHLKQEQEGV--ERDRLPAVTSEEGGVAERDASERKLNRRGSMSYLAAVEEE 4117
Query: 89 ISVSFVADKNGYQPTE 104
+ S V NG + E
Sbjct: 4118 VEESSVKSDNGDEKAE 4133
>AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.
Length = 6885
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 29 KAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQ 88
KA V + Q + + +G E + + +E G + D ++ L RGS Y+A ++
Sbjct: 4061 KATVLNLHQHLKQEQEGV--ERDRLPAVTSEEGGVAERDASERKLNRRGSMSYLAAVEEE 4118
Query: 89 ISVSFVADKNGYQPTE 104
+ S V NG + E
Sbjct: 4119 VEESSVKSDNGDEKAE 4134
>AB023228-1|BAA76855.3| 3541|Homo sapiens KIAA1011 protein protein.
Length = 3541
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 29 KAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQ 88
KA V + Q + + +G E + + +E G + D ++ L RGS Y+A ++
Sbjct: 695 KATVLNLHQHLKQEQEGV--ERDRLPAVTSEEGGVAERDASERKLNRRGSMSYLAAVEEE 752
Query: 89 ISVSFVADKNGYQPTE 104
+ S V NG + E
Sbjct: 753 VEESSVKSDNGDEKAE 768
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.308 0.126 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,170,274
Number of Sequences: 224733
Number of extensions: 698103
Number of successful extensions: 1437
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1437
Number of HSP's gapped (non-prelim): 14
length of query: 115
length of database: 73,234,838
effective HSP length: 80
effective length of query: 35
effective length of database: 55,256,198
effective search space: 1933966930
effective search space used: 1933966930
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 59 (27.9 bits)
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