SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000369-TA|BGIBMGA000369-PA|IPR000618|Insect cuticle
protein
         (115 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063578-1|AAH63578.1|  584|Homo sapiens SRCAP protein protein.        29   2.6  
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ...    29   2.6  
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat...    29   2.6  
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.             29   2.6  
AF053356-3|AAC78792.1|  817|Homo sapiens ORF2 protein.                 29   3.4  
AY505489-1|AAS48457.1|  181|Homo sapiens MHC class I antigen pro...    28   8.0  
AY061759-1|AAL33802.1| 3270|Homo sapiens nesprin-2 gamma protein.      28   8.0  
AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.            28   8.0  
AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.               28   8.0  
AB023228-1|BAA76855.3| 3541|Homo sapiens KIAA1011 protein protein.     28   8.0  

>BC063578-1|AAH63578.1|  584|Homo sapiens SRCAP protein protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 19  EAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
           EA+  P +   +  + V+  SE + D +  E ETS G+S  E+ E +   D Q
Sbjct: 484 EAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETS-GSSASEESESEESEDAQ 535


>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46149 fis, clone TESTI4000621, moderately
           similar to Homo sapiens Snf2-related CBP activator
           protein (SRCAP). ).
          Length = 2427

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 19  EAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
           EA+  P +   +  + V+  SE + D +  E ETS G+S  E+ E +   D Q
Sbjct: 484 EAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETS-GSSASEESESEESEDAQ 535


>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
           SRCAP protein.
          Length = 2971

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 19  EAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
           EA+  P +   +  + V+  SE + D +  E ETS G+S  E+ E +   D Q
Sbjct: 287 EAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETS-GSSASEESESEESEDAQ 338


>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
          Length = 3053

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 19  EAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
           EA+  P +   +  + V+  SE + D +  E ETS G+S  E+ E +   D Q
Sbjct: 465 EAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETS-GSSASEESESEESEDAQ 516


>AF053356-3|AAC78792.1|  817|Homo sapiens ORF2 protein.
          Length = 817

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)

Query: 22  NAPPQG--QKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKND 67
           +AP  G  QK P E + ++ E+D  G + E E S+G   +E+G   +D
Sbjct: 229 SAPHPGPMQKGPKEPIPEEQELDFQGLEEEEEPSEGL--EEEGPEADD 274


>AY505489-1|AAS48457.1|  181|Homo sapiens MHC class I antigen
           protein.
          Length = 181

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 27  GQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDG 86
           G+   V+   Q   VD+   +  Y  S+  S   Q  Y  D    G  +RG ++Y A DG
Sbjct: 61  GETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDGRFLRGYHQY-AYDG 119

Query: 87  Q 87
           +
Sbjct: 120 K 120


>AY061759-1|AAL33802.1| 3270|Homo sapiens nesprin-2 gamma protein.
          Length = 3270

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 29  KAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQ 88
           KA V  + Q  + + +G   E +     + +E G  + D  ++ L  RGS  Y+A   ++
Sbjct: 446 KATVLNLHQHLKQEQEGV--ERDRLPAVTSEEGGVAERDASERKLNRRGSMSYLAAVEEE 503

Query: 89  ISVSFVADKNGYQPTE 104
           +  S V   NG +  E
Sbjct: 504 VEESSVKSDNGDEKAE 519


>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
          Length = 6884

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 29   KAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQ 88
            KA V  + Q  + + +G   E +     + +E G  + D  ++ L  RGS  Y+A   ++
Sbjct: 4060 KATVLNLHQHLKQEQEGV--ERDRLPAVTSEEGGVAERDASERKLNRRGSMSYLAAVEEE 4117

Query: 89   ISVSFVADKNGYQPTE 104
            +  S V   NG +  E
Sbjct: 4118 VEESSVKSDNGDEKAE 4133


>AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.
          Length = 6885

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 29   KAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQ 88
            KA V  + Q  + + +G   E +     + +E G  + D  ++ L  RGS  Y+A   ++
Sbjct: 4061 KATVLNLHQHLKQEQEGV--ERDRLPAVTSEEGGVAERDASERKLNRRGSMSYLAAVEEE 4118

Query: 89   ISVSFVADKNGYQPTE 104
            +  S V   NG +  E
Sbjct: 4119 VEESSVKSDNGDEKAE 4134


>AB023228-1|BAA76855.3| 3541|Homo sapiens KIAA1011 protein protein.
          Length = 3541

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 29  KAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQ 88
           KA V  + Q  + + +G   E +     + +E G  + D  ++ L  RGS  Y+A   ++
Sbjct: 695 KATVLNLHQHLKQEQEGV--ERDRLPAVTSEEGGVAERDASERKLNRRGSMSYLAAVEEE 752

Query: 89  ISVSFVADKNGYQPTE 104
           +  S V   NG +  E
Sbjct: 753 VEESSVKSDNGDEKAE 768


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.308    0.126    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,170,274
Number of Sequences: 224733
Number of extensions: 698103
Number of successful extensions: 1437
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1437
Number of HSP's gapped (non-prelim): 14
length of query: 115
length of database: 73,234,838
effective HSP length: 80
effective length of query: 35
effective length of database: 55,256,198
effective search space: 1933966930
effective search space used: 1933966930
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 59 (27.9 bits)

- SilkBase 1999-2023 -