Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000369-TA|BGIBMGA000369-PA|IPR000618|Insect cuticle
protein
(115 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch... 27 0.99
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 0.99
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 26 1.7
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 25 2.3
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 25 4.0
SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces pombe... 25 4.0
SPBC27.01c |||secretory pathway protein Pga2 |Schizosaccharomyce... 24 5.3
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 24 7.0
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 23 9.2
SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|ch... 23 9.2
>SPAC26H5.04 |||vacuolar import and degradation protein
Vid28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 729
Score = 26.6 bits (56), Expect = 0.99
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 15 VCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTD 69
+ QEAQ P+ V + DSE+D+ F+ E E+ Y+ +++
Sbjct: 608 IMLQEAQRLKPEQMSTNVSSPESDSEMDLQEDDFDREMRPPFDIYEEDTYEPNSE 662
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 26.6 bits (56), Expect = 0.99
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 34 IVKQDSEVDVDGYKF-EYETSDGTSRQEQGEYKNDTDQQGLLV 75
I + ++E D YKF +YE S S E E+K++ D +G ++
Sbjct: 610 IQQNNAEQDEPSYKFHKYEYSSEESGSED-EFKSEKDTKGYVI 651
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 25.8 bits (54), Expect = 1.7
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 32 VEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISV 91
+ V+++SE ++ ++SD ++ +N+ D + V GS++ + P +I
Sbjct: 37 INSVEKESESKLNSKSTTLQSSDS---EDWDSEENEDDITDVGVPGSHEIMFPGHSKIVT 93
Query: 92 SFVADKNG 99
+ DKNG
Sbjct: 94 TTTFDKNG 101
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.4 bits (53), Expect = 2.3
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 53 SDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVADKNGYQPTEQNGT 108
S+ + +GE + +D L S K + DG S+ V++ + PTE G+
Sbjct: 375 SNVSDESPKGEGSSHSDNVVLSDGNSVKKMNEDGADTSLLSVSEVTSHPPTEWTGS 430
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 24.6 bits (51), Expect = 4.0
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 13 AIVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKN 66
A+V + A P+ +K P + V D EVD +S G + ++ E K+
Sbjct: 6 AVVDQIDLNGALPEKKKKPKKSVAFDDEVDAVSKDGPEASSAGATDEDDSERKS 59
>SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 24.6 bits (51), Expect = 4.0
Identities = 16/44 (36%), Positives = 18/44 (40%)
Query: 72 GLLVRGSYKYVAPDGQQISVSFVADKNGYQPTEQNGTQQQPAQA 115
GL + G AP G S + QN TQ QPAQA
Sbjct: 80 GLNLFGQNPQAAPGGSLFGASTTKPQAPGGLFNQNQTQAQPAQA 123
>SPBC27.01c |||secretory pathway protein Pga2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 132
Score = 24.2 bits (50), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 40 EVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
E +VDG + E + GT +E GE+ D +++
Sbjct: 52 EGEVDG-TLDPEMTHGTKPKEHGEFDTDDEEE 82
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 23.8 bits (49), Expect = 7.0
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 5 TLFVLAALAIVCAQEAQNAPPQGQKAPVEIVKQDSEVDVD-GYKFEYETS 53
T+ L A I A P + VEI++Q+ +V+VD KF E++
Sbjct: 1159 TIVSLTAGGIKLATNNTALSPYSAEVTVEILRQNFQVNVDIACKFPNESN 1208
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 23.4 bits (48), Expect = 9.2
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 52 TSDGTSRQ-EQGEYKNDTDQQGLLVRGSYKYVAPDGQ 87
TSD T E+G ND++ Q LL K + P Q
Sbjct: 42 TSDSTVHLFERGNTLNDSNDQILLTCNDIKNITPANQ 78
>SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 274
Score = 23.4 bits (48), Expect = 9.2
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 46 YKFEYETSDGTSRQEQGEYKNDTDQQ 71
YKF+ + + S + G +++D DQ+
Sbjct: 40 YKFKRASKEHNSSPDDGPWQHDLDQE 65
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.308 0.126 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,975
Number of Sequences: 5004
Number of extensions: 20952
Number of successful extensions: 53
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 47
Number of HSP's gapped (non-prelim): 10
length of query: 115
length of database: 2,362,478
effective HSP length: 64
effective length of query: 51
effective length of database: 2,042,222
effective search space: 104153322
effective search space used: 104153322
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 48 (23.4 bits)
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