Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000369-TA|BGIBMGA000369-PA|IPR000618|Insect cuticle
protein
(115 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21580| Best HMM Match : Flotillin (HMM E-Value=0) 29 1.2
SB_42269| Best HMM Match : efhand (HMM E-Value=4.8e-05) 29 1.2
SB_56699| Best HMM Match : ResIII (HMM E-Value=0.053) 28 2.2
SB_12465| Best HMM Match : Ery_res_leader2 (HMM E-Value=2.7) 28 2.2
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8
SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35) 27 5.0
SB_22904| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.03) 27 5.0
SB_19902| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 26 6.6
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 26 8.7
SB_50552| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00012) 26 8.7
SB_32577| Best HMM Match : PH (HMM E-Value=7e-17) 26 8.7
SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14) 26 8.7
>SB_21580| Best HMM Match : Flotillin (HMM E-Value=0)
Length = 393
Score = 28.7 bits (61), Expect = 1.2
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Query: 17 AQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVR 76
A+EA+ + K+D E+ GY E +T + TS+ T Q+
Sbjct: 142 AEEARLKAKYENDTQIAKAKRDFELKKAGYDIEVQTKNATSQMAYNLQAAVTKQKIKEEE 201
Query: 77 GSYKYVAPDGQQISVSFVADKNGYQPTEQNGTQQQPAQA 115
K V GQQI V + + E T +QPA+A
Sbjct: 202 MQIK-VVERGQQIKVQ--EQEIARRERELEATVRQPAEA 237
>SB_42269| Best HMM Match : efhand (HMM E-Value=4.8e-05)
Length = 901
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 67 DTDQQGLLVRGSYKYVAPDGQ-QISVSFVAD 96
D DQ G+L R Y+ + DG+ Q+ +++ AD
Sbjct: 606 DADQDGVLTRQEYRTLVVDGKLQLIINYTAD 636
>SB_56699| Best HMM Match : ResIII (HMM E-Value=0.053)
Length = 314
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/38 (26%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 14 IVCAQEAQNAPPQGQK-APVEIVKQDSEVDVDGYKFEY 50
+VC + PP G K P +++K+ ++ ++ ++F+Y
Sbjct: 245 VVCCGDCGQVPPWGDKEGPHDMLKEWAQANIRWFEFDY 282
>SB_12465| Best HMM Match : Ery_res_leader2 (HMM E-Value=2.7)
Length = 712
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 26 QGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEY 64
Q QKA ++ V ++ E + +G + + TS G QE EY
Sbjct: 356 QRQKATIQDVIEEEEEEQEGKEDKDTTSTGKPPQESSEY 394
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 38 DSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVADK 97
+ EV+V F +E DGT G Y +G+ +G+ P +++ ++
Sbjct: 167 NEEVEVS-IMFSFENGDGTQDLTAGHYNESFCCKGVHCKGNVDQGGPSASKVANHIHMEQ 225
Query: 98 NGYQP 102
N +P
Sbjct: 226 NHVKP 230
>SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)
Length = 916
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 39 SEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVADKN 98
SE DG + E E + S +E+ E + D D +G+LV+ S + G V+ V D N
Sbjct: 223 SEEPQDGEEEEEEEEEEESEEEEEE-EEDEDGEGVLVK-SDEAGYDSGTTAIVALVKDNN 280
>SB_22904| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.03)
Length = 294
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 37 QDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVAD 96
Q S+V +G E +T + ++EQG + T +QG +G+ + +
Sbjct: 165 QGSKVH-EGNALESKTKENKVQEEQGTGEQGTGEQGTGEQGTGEQGTGEQGTEEQGTGEQ 223
Query: 97 KNGYQPTEQNGTQQQ 111
G Q TE+ GT +Q
Sbjct: 224 GAGEQGTEEQGTGEQ 238
>SB_19902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 37 QDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVAD 96
Q S+V +G E +T + ++EQG + T +QG +G+ + +
Sbjct: 183 QGSKVH-EGNALESKTKENKVQEEQGTGEQGTGEQGTGEQGTGEQGTGEQGTEEQGTGEQ 241
Query: 97 KNGYQPTEQNGTQQQ 111
G Q TE+ GT +Q
Sbjct: 242 GAGEQGTEEQGTGEQ 256
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 26.2 bits (55), Expect = 6.6
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 33 EIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKND---TDQQGLLVRGSYKYVAPDGQQI 89
+I DS +DVD F S G R E K++ ++ Q RGS Y D
Sbjct: 71 DIENNDSLLDVDVTNFTKNASRGRRRSEDKRSKSNRQSSNGQNRGKRGSRAYQNFDNNSS 130
Query: 90 SVSFVADKNGYQPTEQN 106
+ + D NG + N
Sbjct: 131 NGNSGGDGNGEDNDDSN 147
>SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 23 APPQGQKAPVEIVKQDSEVDVDGY 46
APP+G +A V VK +SE Y
Sbjct: 423 APPKGHEAKVRTVKSESEAGKKNY 446
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 63 EYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVADKNGYQPTEQNGTQQQP 112
+Y+ + QQG+ ++ Y++ QQ + + + Q +Q QQQP
Sbjct: 212 QYQGNVTQQGVSMQQQYQWQQQPYQQQTQQWQQQTSYQQQQQQQHHQQQP 261
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 1 MMKTTLFVLAALAIVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFE 49
M+ TT+ +L L V + + P + + PVE E +V +FE
Sbjct: 205 MIMTTMIMLPVLRFVAPVQFEAMPVEFEAMPVEFEAMHVEFEVMPVEFE 253
>SB_50552| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00012)
Length = 966
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 14 IVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGE 63
I C + NA VKQ ++VDVDG+ E D + + E
Sbjct: 197 ITCQKPVDNADLLVLVNRQPYVKQTNQVDVDGFPLENFVDDNLNDDDDTE 246
>SB_32577| Best HMM Match : PH (HMM E-Value=7e-17)
Length = 1248
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 23 APPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQE 60
APP ++ P VKQD E +V + +++D S E
Sbjct: 987 APPAPRRPPPPAVKQDGEKEVLPVLLKGDSTDSESDDE 1024
>SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14)
Length = 869
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 20 AQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYK 65
A+ P + + EIV+ DS V Y E SDG ++ YK
Sbjct: 10 ARVKPTKAKTGTYEIVEDDSGSSVIEYTIPKELSDGYINNKREVYK 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.308 0.126 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,034,461
Number of Sequences: 59808
Number of extensions: 162635
Number of successful extensions: 362
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 355
Number of HSP's gapped (non-prelim): 15
length of query: 115
length of database: 16,821,457
effective HSP length: 73
effective length of query: 42
effective length of database: 12,455,473
effective search space: 523129866
effective search space used: 523129866
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 54 (25.8 bits)
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