GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000369-TA|BGIBMGA000369-PA|IPR000618|Insect cuticle
protein
         (115 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical pr...    29   0.61 
AC024788-3|AAF60614.2|   98|Caenorhabditis elegans Caenacin (cae...    29   0.61 
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    29   0.61 
Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical pr...    29   0.81 
Z47358-7|CAA87435.1|  369|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z66521-5|CAA91396.2|  793|Caenorhabditis elegans Hypothetical pr...    27   2.5  
AF188715-1|AAF05590.1|  793|Caenorhabditis elegans alanyl-tRNA s...    27   2.5  
Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical pr...    27   4.3  
U23510-5|AAY55872.1|  110|Caenorhabditis elegans Hypothetical pr...    27   4.3  
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr...    27   4.3  
AC024847-5|AAN73850.1|  792|Caenorhabditis elegans Ww domain pro...    26   5.7  
AC024847-4|AAN73849.1|  794|Caenorhabditis elegans Ww domain pro...    26   5.7  
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    26   7.6  
Z80223-6|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    25   10.0 
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr...    25   10.0 
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr...    25   10.0 
U97005-11|AAB52288.1|  891|Caenorhabditis elegans Hypothetical p...    25   10.0 

>Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical
          protein F23A7.7 protein.
          Length = 965

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 33 EIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQG 72
          E+V++  EV+V+ Y  + ETSD     E G+++   D+ G
Sbjct: 57 EVVREGEEVEVNSYLDDEETSDFI--DENGDFRYPVDELG 94


>AC024788-3|AAF60614.2|   98|Caenorhabditis elegans Caenacin
          (caenorhabditis bacteriocin)protein 6 protein.
          Length = 98

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 1  MMKTTLFVLAALAIVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDG 45
          M  T+L +L    +     A  AP +GQ A  E V+   +V++DG
Sbjct: 1  MRSTSLLILLFCILATVFSAPKAPERGQLAQAEQVQGPYDVELDG 45


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 11/54 (20%), Positives = 29/54 (53%)

Query: 14   IVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKND 67
            + C +E++  P   +K+P++I ++ SE+D +          G+  ++  +Y ++
Sbjct: 2860 VSCGEESEELPESPEKSPIKIPRRISELDENDESRRNSLRKGSPNKQMMKYYSE 2913


>Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical
           protein T21B6.3 protein.
          Length = 821

 Score = 29.1 bits (62), Expect = 0.81
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 1/97 (1%)

Query: 18  QEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRG 77
           Q+ Q  PPQ Q  P     Q        +   +E      R++Q + +    QQ    + 
Sbjct: 255 QQQQQRPPQPQPQPQPQPPQRPPQQPQSFSGTHELHLQRQREQQQQQQQQQQQQQQRQQN 314

Query: 78  SYKYVAPDGQQISVSFVADKNGYQPTEQNGTQQQPAQ 114
             +       Q   S +  ++G  P +Q+  QQQP Q
Sbjct: 315 PQQQ-PQQTTQFGQSQIQLQSGPVPPQQHPQQQQPQQ 350


>Z47358-7|CAA87435.1|  369|Caenorhabditis elegans Hypothetical
           protein ZK1307.9 protein.
          Length = 369

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 16/45 (35%), Positives = 22/45 (48%)

Query: 41  VDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPD 85
           +  D   F+YE  +G SRQE      D  Q G + RG  + +A D
Sbjct: 100 IRTDPKNFDYELVEGCSRQELRFDPTDIAQIGAVDRGFTQKLAAD 144


>Z66521-5|CAA91396.2|  793|Caenorhabditis elegans Hypothetical
           protein W02B12.6 protein.
          Length = 793

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 28  QKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQ 61
           QK  V   ++ S VD D ++F+Y T D    +EQ
Sbjct: 605 QKLGVGSGQKGSSVDCDRFRFDYSTGDEDLSKEQ 638


>AF188715-1|AAF05590.1|  793|Caenorhabditis elegans alanyl-tRNA
           synthetase protein.
          Length = 793

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 28  QKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQ 61
           QK  V   ++ S VD D ++F+Y T D    +EQ
Sbjct: 605 QKLGVGSGQKGSSVDCDRFRFDYSTGDEDLSKEQ 638


>Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical
           protein F37D6.1 protein.
          Length = 1227

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 32  VEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISV 91
           VE VKQ   + V+GY++   T+D  S+  Q + +    Q   L R S K   P G+    
Sbjct: 571 VECVKQRKMISVEGYQWTENTAD-ESQSSQSQLQPVRPQP--LPRTSSKSTIPYGKTSGP 627

Query: 92  SFVADKNG 99
           S  + + G
Sbjct: 628 SSTSTQVG 635


>U23510-5|AAY55872.1|  110|Caenorhabditis elegans Hypothetical
          protein R12C12.10 protein.
          Length = 110

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 22 NAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGE-YKNDTDQQGLLV-RGSY 79
          N  P G  A  E   + S     GY  +Y   +G    + G  Y  D + + LL+ +GSY
Sbjct: 38 NGCPSGDGAAAEATTESSASTTLGYYEQYWQGNGWKTDDAGNVYVGDDNAKLLLIQQGSY 97


>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
           protein T26A5.5a protein.
          Length = 1076

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 14  IVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEY 64
           I+  Q+  + P +   AP + +K+D     + ++ EYE       QE+ EY
Sbjct: 566 IILPQQPSSGPLEYLPAPKDEIKEDINGFEEEFEEEYEGIGQRDDQEEEEY 616


>AC024847-5|AAN73850.1|  792|Caenorhabditis elegans Ww domain
           protein (e3 ubiquitinligase) protein 1, isoform b
           protein.
          Length = 792

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 57  SRQEQGEYKNDTDQQGLLVRGSYK 80
           +R E GE+KND +   LL + S K
Sbjct: 115 TRNENGEFKNDINNISLLAKDSSK 138


>AC024847-4|AAN73849.1|  794|Caenorhabditis elegans Ww domain
           protein (e3 ubiquitinligase) protein 1, isoform a
           protein.
          Length = 794

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 57  SRQEQGEYKNDTDQQGLLVRGSYK 80
           +R E GE+KND +   LL + S K
Sbjct: 115 TRNENGEFKNDINNISLLAKDSSK 138


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 28  QKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTD 69
           +K+ +     DSEV V G K E   SDG S +E+ +   D D
Sbjct: 166 KKSTIGFSYDDSEV-VKGGKDEKYNSDGDSEEEEMDDMQDLD 206


>Z80223-6|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9 protein.
          Length = 613

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 8/28 (28%), Positives = 17/28 (60%)

Query: 27  GQKAPVEIVKQDSEVDVDGYKFEYETSD 54
           G  AP+   + D ++++D Y  ++ET +
Sbjct: 463 GNDAPIFFPESDDKLELDNYNTQFETEN 490


>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
           protein K08E4.1 protein.
          Length = 1208

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 17  AQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKND 67
           +  A N   + ++A  E+  + S+ + D YKF+  T D   +  + +YK D
Sbjct: 107 SMNAMNEREEAERAMKEM--ELSQRNRDRYKFQNMTEDEVQKYFENKYKGD 155


>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
           protein K08E4.1 protein.
          Length = 1208

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 17  AQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKND 67
           +  A N   + ++A  E+  + S+ + D YKF+  T D   +  + +YK D
Sbjct: 107 SMNAMNEREEAERAMKEM--ELSQRNRDRYKFQNMTEDEVQKYFENKYKGD 155


>U97005-11|AAB52288.1|  891|Caenorhabditis elegans Hypothetical
           protein F19F10.10 protein.
          Length = 891

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 13/54 (24%), Positives = 22/54 (40%)

Query: 47  KFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVADKNGY 100
           K +Y       ++  G   N      L    ++KY+  +G  + V+  AD  GY
Sbjct: 828 KIDYRKDMANIQKHAGRLANCMKSGTLEAPATWKYMELNGSNLIVALEADTEGY 881


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.308    0.126    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,048,883
Number of Sequences: 27539
Number of extensions: 127736
Number of successful extensions: 381
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 370
Number of HSP's gapped (non-prelim): 17
length of query: 115
length of database: 12,573,161
effective HSP length: 72
effective length of query: 43
effective length of database: 10,590,353
effective search space: 455385179
effective search space used: 455385179
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 53 (25.4 bits)