Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000369-TA|BGIBMGA000369-PA|IPR000618|Insect cuticle
protein
(115 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein... 29 0.58
At4g16680.1 68417.m02519 RNA helicase, putative similar to SP|Q1... 28 1.3
At1g56210.1 68414.m06460 copper chaperone (CCH)-related low simi... 27 3.1
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 27 4.1
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 27 4.1
At1g69250.1 68414.m07936 nuclear transport factor 2 (NTF2) famil... 27 4.1
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 26 5.4
At4g04350.1 68417.m00622 leucyl-tRNA synthetase, putative / leuc... 26 5.4
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 26 5.4
At3g28110.1 68416.m03508 hypothetical protein 26 5.4
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 26 5.4
At5g63550.1 68418.m07976 expressed protein 26 7.1
At4g18150.1 68417.m02697 hypothetical protein 26 7.1
At4g17690.1 68417.m02642 peroxidase, putative similar to peroxid... 26 7.1
At3g28270.2 68416.m03531 expressed protein similar to At14a prot... 25 9.4
At3g28270.1 68416.m03530 expressed protein similar to At14a prot... 25 9.4
At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,... 25 9.4
>At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 275
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 36 KQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
K DSE D + FE + SDG+S + EY + +D +
Sbjct: 178 KSDSESDSEASVFETD-SDGSSGESSSEYSSSSDSE 212
>At4g16680.1 68417.m02519 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 883
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 14 IVCAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDG----TSRQEQGEYK 65
+V QEA Q QKA V +D + VDGY+F ++ G +S E G+++
Sbjct: 150 VVTEQEAWE-DHQAQKARVRFGAKDKKQVVDGYEFVFDDLTGFVEESSEAETGKHR 204
>At1g56210.1 68414.m06460 copper chaperone (CCH)-related low
similarity to copper homeostasis factor
[GI:3168840][PMID:9701579] and farnesylated proteins
ATFP3 [GI:4097547] and GMFP7 [Glycine max][GI:4097573];
contains PF00403 Heavy-metal-associated domain
Length = 364
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 92 SFVADKNGYQPTEQNGTQQQPAQA 115
S+ NGYQP++QN Q +P+ +
Sbjct: 326 SYAYMHNGYQPSDQNPCQPRPSDS 349
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 75 VRGSYKYVAPDGQQISVSFVADK--NGYQPTEQNGTQQQP 112
VRG+ + + +GQ + ++ V DK NG + QQQP
Sbjct: 500 VRGTVRTLTENGQAVDLNVVLDKLMNGDRGAMMQQQQQQP 539
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 30 APVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTD 69
+P EI+ +++ D KF+YETS S + ++ D
Sbjct: 1458 SPTEIIPENNYEDPTLCKFQYETSSVGSHGDMDDFSGRKD 1497
>At1g69250.1 68414.m07936 nuclear transport factor 2 (NTF2) family
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF02136: Nuclear transport factor
2 (NTF2) domain, PF00076: RNA recognition motif (a.k.a.
RRM, RBD, or RNP domain)
Length = 427
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 18 QEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRG 77
Q A+N P A ++ ++ EVD DG K +T G+++ + G + + G
Sbjct: 341 QAAKNTP--FMLADRKLRVKEKEVDYDGSKPSGKTKGGSNKTQNGSADSSKTENGSADDS 398
Query: 78 SYKYVAPDGQQ 88
A DG++
Sbjct: 399 KTNGSAEDGEK 409
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/37 (24%), Positives = 22/37 (59%)
Query: 38 DSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLL 74
++E +++ EY+ + ++GEY+ D D++ +L
Sbjct: 410 EAESNMNDLVSEYQQYQDATADDEGEYEEDEDEEEIL 446
>At4g04350.1 68417.m00622 leucyl-tRNA synthetase, putative /
leucine--tRNA ligase, putative similar to SP|P36430
Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA
ligase) (LeuRS) {Bacillus subtilis}; contains Pfam
profile PF00133: tRNA synthetases class I (I, L, M and
V)
Length = 973
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 44 DGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVADK 97
+G + + DG R+ E T + L +Y VAP+ Q +S A++
Sbjct: 310 EGAELNFSILDGEGRETDKEITVYTTRPDTLFGATYMVVAPEHQLLSYFVTAEQ 363
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 61 QGEYKNDTDQQGLLVRGSYKYVAPD 85
QGE+ D+D+ G LV G + PD
Sbjct: 78 QGEHSGDSDEVGPLVLGYTDFSTPD 102
>At3g28110.1 68416.m03508 hypothetical protein
Length = 354
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 33 EIVKQDSEVDVD-GYKFEYETSDGTSRQEQGEYKNDTD 69
E + D E D+D G + EYE D ++ + +DTD
Sbjct: 132 EDINVDEEDDIDEGDENEYEDEDNEEDEDMDVHDDDTD 169
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 55 GTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQQISVSFVADKNGYQPTEQNG 107
G+S E GE++N Q G G + Y G S S +A+ + + E NG
Sbjct: 57 GSSVVESGEFRNTLMQSGSQATGWFPYRDLYGLGASQSEIAEPSSFSDPE-NG 108
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 36 KQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQ 71
K + + D +G +E D +E K DTD +
Sbjct: 292 KDEGDADSEGTNDPHEEDDAAPEEESDHEKTDTDDE 327
>At4g18150.1 68417.m02697 hypothetical protein
Length = 762
Score = 25.8 bits (54), Expect = 7.1
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 19 EAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGS 78
E A QGQ+A +V G++ + ++Q Q + ++ QQ G
Sbjct: 666 EKTTAWHQGQQANSRVVPGSGYYSYPGHQNQQPPGFRQAQQLQHQQQSSQQQQQQQHYGG 725
Query: 79 YKYVAPDGQQISVSFVADKNGYQPTEQN 106
+ YV+P Q +S + YQ +QN
Sbjct: 726 HGYVSPYHSQAVMSLEHLHHQYQ-QQQN 752
>At4g17690.1 68417.m02642 peroxidase, putative similar to peroxidase
[Spinacia oleracea] gi|1781336|emb|CAA71495
Length = 326
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 74 LVRGSYKYVAPDGQQISVSFVADKNGYQPTEQNGT 108
L + Y+ PD +I V K G QPT GT
Sbjct: 26 LTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGT 60
>At3g28270.2 68416.m03531 expressed protein similar to At14a protein
(GI:11994571 and GI:11994573) [Arabidopsis thaliana]
Length = 374
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 16 CAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETS--DGTSRQEQGE 63
C + A+ ++A E K+ +E DV G K +YE + D S +E G+
Sbjct: 117 CVENAEMGQLLIREALAEFEKESAEKDVGGKKKKYEKTLEDLKSFKEMGD 166
>At3g28270.1 68416.m03530 expressed protein similar to At14a protein
(GI:11994571 and GI:11994573) [Arabidopsis thaliana]
Length = 374
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 16 CAQEAQNAPPQGQKAPVEIVKQDSEVDVDGYKFEYETS--DGTSRQEQGE 63
C + A+ ++A E K+ +E DV G K +YE + D S +E G+
Sbjct: 117 CVENAEMGQLLIREALAEFEKESAEKDVGGKKKKYEKTLEDLKSFKEMGD 166
>At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase SP:P45582 from
[Asparagus officinalis]
Length = 815
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 40 EVDVDGYKFEYETSDGTSRQEQGEYKNDTDQQGLLVRGSYKYVAPDGQ 87
+V + G KF T DG+++ + +Y++ Q + S+ P+G+
Sbjct: 576 QVGLKGEKFHVYTEDGSAKVQWKQYRDSKSQPLTWYKASFD--TPEGE 621
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.308 0.126 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,774,639
Number of Sequences: 28952
Number of extensions: 112851
Number of successful extensions: 261
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 250
Number of HSP's gapped (non-prelim): 17
length of query: 115
length of database: 12,070,560
effective HSP length: 72
effective length of query: 43
effective length of database: 9,986,016
effective search space: 429398688
effective search space used: 429398688
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 53 (25.4 bits)
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