Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000367-TA|BGIBMGA000367-PA|IPR000504|RNA-binding region
RNP-1 (RNA recognition motif), IPR012677|Nucleotide-binding,
alpha-beta plait
(274 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 41 0.001
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 41 0.001
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 40 0.002
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 39 0.003
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 39 0.003
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 39 0.003
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 39 0.003
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 39 0.003
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 39 0.003
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 39 0.003
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 38 0.006
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 38 0.006
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.008
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.008
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 38 0.010
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 37 0.014
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 37 0.014
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 37 0.018
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 36 0.024
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 36 0.024
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 36 0.024
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 36 0.024
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 36 0.024
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 36 0.031
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 36 0.031
AL117204-23|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 36 0.031
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 36 0.031
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 36 0.031
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 36 0.031
Z78536-3|CAB01717.1| 270|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.055
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 35 0.055
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 34 0.095
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 34 0.13
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 34 0.13
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 32 0.51
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 32 0.51
Z99270-1|CAB16470.3| 497|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 31 0.89
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 31 0.89
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 31 0.89
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.89
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 0.89
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.89
Z66521-9|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.2
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 31 1.2
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 31 1.2
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 30 2.1
Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70270-1|CAB61007.1| 407|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF029887-1|AAC48376.1| 407|Caenorhabditis elegans UNC-129 protein. 29 2.7
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81494-4|CAB04050.2| 319|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 29 4.7
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 4.7
AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical... 29 4.7
AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical... 29 4.7
Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical pr... 28 6.3
U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein. 28 6.3
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 28 6.3
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 6.3
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 28 8.3
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 28 8.3
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 28 8.3
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 28 8.3
AL032646-11|CAE46682.1| 193|Caenorhabditis elegans Hypothetical... 28 8.3
AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical... 28 8.3
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 120 bits (288), Expect = 1e-27
Identities = 84/262 (32%), Positives = 124/262 (47%), Gaps = 17/262 (6%)
Query: 10 SWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRK 69
SWA+ VE D P + +G + T + + D + K+V +K+ + V K +A RK
Sbjct: 9 SWAEAVEQDNA---PHIQEGADGTRTETAFT-EVDGVRWKVVTQFKVINKRVPKVVADRK 64
Query: 70 TWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCR 129
W KFG + GP ATT VAE+V MQF ++ Q D E +S CR
Sbjct: 65 KWVKFGSCKGEPAGPQVATTYVAEEVDMQFTRNRAGEQILDVQEDKQTAKTTSRE--HCR 122
Query: 130 TCQG-DHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXXSNKYIPPSSAGRIPGRDQPPVRR 188
C+G DH + +CP+K + + G P Q R
Sbjct: 123 HCKGNDHWSTHCPYK----------VMYQLDEEADADKDTEKDRMAMGMRPDGRQIDRNR 172
Query: 189 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 248
D R++NL E ++ DL G V ++++A++K TG KGFA+V F+ R DAA+
Sbjct: 173 SDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAAR 232
Query: 249 AIQSLNGHGYDHLILNVEWSKP 270
AI LN H++L VEW++P
Sbjct: 233 AIAELNDIRMYHMVLKVEWTRP 254
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 196 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 255
+ NL E D+ L K +G V ++ + +K TG CKGFA V F F A A +L+G
Sbjct: 283 LRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDG 342
Query: 256 HGYDHLILNV 265
+ + ++++
Sbjct: 343 YVFKGRMMHI 352
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 192 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 251
T + + NL + E + + +G + L K G +GFA+V F A+ A+
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALA 61
Query: 252 SLNGHGYDHLILNVEWSKP 270
N ++ L VE +P
Sbjct: 62 KSNQTFFNSKKLTVEECRP 80
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 196 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 255
+ NLS++ E D+ D+ FG ++K L ++ +G+ +GF +++F DA A L
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 256 HGYDHLILNVEWS 268
D + V++S
Sbjct: 140 TDLDGHKIRVDFS 152
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 193 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQS 252
++ + N+ E +I + G V+ + + ++ TG +GFA+V F A A +A++
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 253 LNGHGYDHLILNVEWS 268
LNG ++ L V ++
Sbjct: 67 LNGVAFNGRNLRVNYA 82
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 173 SSAGRIPGRDQPPVRREDVTAIRISNLSNFAV---EADIDDLVKGFGPVHKLYLAKEKST 229
SS GR + Q V+++ + I + + E ++ + FG V ++ +A+ + T
Sbjct: 10 SSGGRKQPQKQDKVQKKQLKKIYVVKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRT 69
Query: 230 GHCKGFAYVHFKFRADAAKAIQSLNGH 256
G+ KG+AYV F +A A A +S+NG+
Sbjct: 70 GNHKGWAYVGFDNKAVAEIAAESMNGY 96
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 189 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 248
E T + I+ L + ++ L G + L ++K TG G+ +V++ DA +
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 249 AIQSLNGHGYDHLILNVEWSKP 270
A+ S NG + + V +++P
Sbjct: 99 AVSSFNGLRLQNKTIKVSYARP 120
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 207 DIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 255
+++ + + FG + + + TG KG +V F + +A AI++LNG
Sbjct: 143 ELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNG 191
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 196 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 255
+ NLS+ + + L FG + + + ++ T CKG+A+V +A A+ SLNG
Sbjct: 378 VYNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYAFVSMSNYTEAYNAMLSLNG 436
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 189 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 248
+D I I LS E D+ + +G V + L ++K TG KGFA++ +K +
Sbjct: 35 KDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTIL 94
Query: 249 AIQSLNGHGYDHLILNVE 266
A+ + NG ++ V+
Sbjct: 95 AVDNFNGISLHKRMIRVD 112
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 191 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 250
+T+++I NLS D+ + +G + +++ ++K + KGF +V F R DA A+
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 251 QSLNGHGYDHLILNVEWSK 269
+G D L V +K
Sbjct: 78 DRTDGKLVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 191 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 250
+T+++I NLS D+ + +G + +++ ++K + KGF +V F R DA A+
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 251 QSLNGHGYDHLILNVEWSK 269
+G D L V +K
Sbjct: 78 DRTDGKLVDGRELRVTLAK 96
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 181 RDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 240
RDQ R T + + NLS + E + +L G V ++ + ++ GF +V +
Sbjct: 27 RDQETALRTSCT-LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEY 85
Query: 241 KFRADAAKAIQSLNGHGYDHLILNVEW 267
R DA A+Q+++ D ++ +W
Sbjct: 86 YTREDAELALQNISNTRMDDRVIRADW 112
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/90 (21%), Positives = 41/90 (45%)
Query: 179 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 238
PG+ Q + + + +LS+ + + + FG V + ++ +T KG+ +V
Sbjct: 9 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 68
Query: 239 HFKFRADAAKAIQSLNGHGYDHLILNVEWS 268
+ R +A +AI+ +NG + W+
Sbjct: 69 SYPKREEAERAIEQMNGQWLGRRTIRTNWA 98
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 190 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 249
D T++ + N+++ E +I FG + ++ + K +G+A+V F + AAKA
Sbjct: 126 DNTSVYVGNIASLT-EDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKA 178
Query: 250 IQSLNGHGYDHLILNVEWSK 269
I +N ++ W K
Sbjct: 179 IVQMNNQDVGGQLVRCSWGK 198
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/90 (21%), Positives = 41/90 (45%)
Query: 179 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 238
PG+ Q + + + +LS+ + + + FG V + ++ +T KG+ +V
Sbjct: 19 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 78
Query: 239 HFKFRADAAKAIQSLNGHGYDHLILNVEWS 268
+ R +A +AI+ +NG + W+
Sbjct: 79 SYPKREEAERAIEQMNGQWLGRRTIRTNWA 108
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 190 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 249
D T++ + N+++ E +I FG + ++ + K +G+A+V F + AAKA
Sbjct: 136 DNTSVYVGNIASLT-EDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKA 188
Query: 250 IQSLNGHGYDHLILNVEWSK 269
I +N ++ W K
Sbjct: 189 IVQMNNQDVGGQLVRCSWGK 208
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/90 (21%), Positives = 41/90 (45%)
Query: 179 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 238
PG+ Q + + + +LS+ + + + FG V + ++ +T KG+ +V
Sbjct: 122 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 181
Query: 239 HFKFRADAAKAIQSLNGHGYDHLILNVEWS 268
+ R +A +AI+ +NG + W+
Sbjct: 182 SYPKREEAERAIEQMNGQWLGRRTIRTNWA 211
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 190 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 249
D T++ + N+++ E +I FG + ++ + K +G+A+V F + AAKA
Sbjct: 239 DNTSVYVGNIASLT-EDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKA 291
Query: 250 IQSLNGHGYDHLILNVEWSK 269
I +N ++ W K
Sbjct: 292 IVQMNNQDVGGQLVRCSWGK 311
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/90 (21%), Positives = 41/90 (45%)
Query: 179 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 238
PG+ Q + + + +LS+ + + + FG V + ++ +T KG+ +V
Sbjct: 90 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 149
Query: 239 HFKFRADAAKAIQSLNGHGYDHLILNVEWS 268
+ R +A +AI+ +NG + W+
Sbjct: 150 SYPKREEAERAIEQMNGQWLGRRTIRTNWA 179
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 190 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 249
D T++ + N+++ E +I FG + ++ + K +G+A+V F + AAKA
Sbjct: 207 DNTSVYVGNIASLT-EDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKA 259
Query: 250 IQSLNGHGYDHLILNVEWSK 269
I +N ++ W K
Sbjct: 260 IVQMNNQDVGGQLVRCSWGK 279
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 184 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 243
P +RR I I NL I D FG + +A ++ G KG+ +VHF+
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETE 170
Query: 244 ADAAKAIQSLNG 255
A AIQ +NG
Sbjct: 171 EAAQNAIQKVNG 182
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 179 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 238
PG++Q + ++ + +L E+ + + GPV + + ++ +T G+AYV
Sbjct: 20 PGQNQTG-SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYV 78
Query: 239 HFKFRADAAKAIQSLNGHGYDHLILNVEWSK 269
+F+ ADA +A+ ++N + + WS+
Sbjct: 79 NFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 184 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 243
P +RR I I NL I D FG + +A ++ G KG+ +VHF+
Sbjct: 49 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETE 107
Query: 244 ADAAKAIQSLNG 255
A AIQ +NG
Sbjct: 108 EAAQNAIQKVNG 119
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 184 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 243
P +RR I I NL I D FG + +A ++ G KG+ +VHF+
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETE 170
Query: 244 ADAAKAIQSLNG 255
A AIQ +NG
Sbjct: 171 EAAQNAIQKVNG 182
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 179 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 238
PG++Q + ++ + +L E+ + + GPV + + ++ +T G+AYV
Sbjct: 20 PGQNQTG-SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYV 78
Query: 239 HFKFRADAAKAIQSLNGHGYDHLILNVEWSK 269
+F+ ADA +A+ ++N + + WS+
Sbjct: 79 NFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 196 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
+ NLS E I + + FG + + K K +GH KG A+VHF +A+ I+ +
Sbjct: 267 LRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGV 324
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 196 ISNLSNFAVEADIDDLVKGFGPVHKLYLA-KEKSTGHCKGFAYVHFKFRADAAKAIQSLN 254
I NL + D+ +L G ++ L K C GF ++ F +ADA K + N
Sbjct: 99 IRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGREFFN 158
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/75 (20%), Positives = 37/75 (49%)
Query: 191 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 250
+ ++ + N E ++ + G ++ + + ++ TG +GFA++ F A +A+
Sbjct: 4 IFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Query: 251 QSLNGHGYDHLILNV 265
+ +NG ++ L V
Sbjct: 64 EQMNGAEFNGRPLRV 78
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 191 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 250
V + I N+ E +++L K + + ++ K+ +A++HF R D KA+
Sbjct: 376 VKVLYIRNIKEAVTEEKLNELFKEYASLDRVKKVKD--------YAFIHFNERDDCLKAM 427
Query: 251 QSLNGHGYDHLILNVEWSKPPQ 272
+ NG + ++ +KPPQ
Sbjct: 428 EEWNGKELEGTVVEASLAKPPQ 449
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
I + ++ E + L + G + L L + +G +G+A+V + + DAA A ++
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 254 NGH 256
+GH
Sbjct: 262 DGH 264
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 184 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 243
P V R I + L E+ + +L+ GPV + + K++ T + +GF +V F
Sbjct: 5 PIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGE 64
Query: 244 ADAAKAIQSLN 254
DA AI+ LN
Sbjct: 65 EDADYAIKILN 75
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 190 DVTA-IRISNLSNFAVEADIDDLVKGFGPVHKL-YLAKEKSTGHCKGFAYVHFKFRADAA 247
DV A I + NL E + D FG + ++ + ++ +G KGFA+++F +
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASD 156
Query: 248 KAIQSLNG 255
A++++NG
Sbjct: 157 TALEAMNG 164
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 184 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 243
P V R I + L E+ + +L+ GPV + + K++ T + +GF +V F
Sbjct: 15 PIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGE 74
Query: 244 ADAAKAIQSLN 254
DA AI+ LN
Sbjct: 75 EDADYAIKILN 85
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 190 DVTA-IRISNLSNFAVEADIDDLVKGFGPVHKL-YLAKEKSTGHCKGFAYVHFKFRADAA 247
DV A I + NL E + D FG + ++ + ++ +G KGFA+++F +
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASD 166
Query: 248 KAIQSLNG 255
A++++NG
Sbjct: 167 TALEAMNG 174
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 193 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQS 252
++ + N E D+ + G V + + ++ TG +GFA+V F A A +A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 253 LNGHGYDHLILNVEWSKPPQN 273
NG ++ L V ++ N
Sbjct: 65 FNGVDFNGRALRVNLAQNRNN 85
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/86 (24%), Positives = 43/86 (50%)
Query: 184 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 243
PP + ++ I +L EA + + GPV + + ++ ++ G+AYV+F+
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 244 ADAAKAIQSLNGHGYDHLILNVEWSK 269
ADA +A+ ++N + + WS+
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQ 134
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 184 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 243
P RR I I NL + D FG + +A + G+ KG+ +VHF+
Sbjct: 137 PAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETE 195
Query: 244 ADAAKAIQSLNG 255
A AI+ +NG
Sbjct: 196 HSAQTAIEKVNG 207
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/86 (24%), Positives = 43/86 (50%)
Query: 184 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 243
PP + ++ I +L EA + + GPV + + ++ ++ G+AYV+F+
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 244 ADAAKAIQSLNGHGYDHLILNVEWSK 269
ADA +A+ ++N + + WS+
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQ 134
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 184 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 243
P RR I I NL + D FG + +A + G+ KG+ +VHF+
Sbjct: 137 PAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETE 195
Query: 244 ADAAKAIQSLNG 255
A AI+ +NG
Sbjct: 196 HSAQTAIEKVNG 207
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 196 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC-KGFAYVHFKFRADAAKAIQSLN 254
I NLS ++ ++++ +G + + L ++ H +G+ YV + DA K+I+ ++
Sbjct: 137 IKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMD 196
Query: 255 GHGYDHLILNVE 266
G D + ++VE
Sbjct: 197 GGQIDGMAVHVE 208
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 190 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 249
D T++ + N++N E +I FGP++ E T +G+A+V F+ + AA+A
Sbjct: 254 DNTSVYVGNIANLG-EDEIRRAFDRFGPIN------EVRTFKIQGYAFVKFETKESAARA 306
Query: 250 IQSLNGHGYDHLILNVEWSK 269
I +N I+ W K
Sbjct: 307 IVQMNNADIGGQIVRCSWGK 326
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 215 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS--KPPQ 272
FG V + + ++ +T KG+ +V + R DA +AI +NG + W+ KP +
Sbjct: 155 FGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDE 214
Query: 273 N 273
+
Sbjct: 215 D 215
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Query: 189 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 248
ED + ++NL + + L G V K + E G +A+V F A
Sbjct: 37 EDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHNQATL 93
Query: 249 AIQSLNGHGYDHLILNVEWSKPPQ 272
A+QS NG ++V W+ P+
Sbjct: 94 ALQSHNGRELLEKEMHVTWAFEPR 117
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 179 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 238
PG++Q + ++ + +L E+ + + GPV + + ++ +T G+AYV
Sbjct: 20 PGQNQTG-SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYV 78
Query: 239 HFKFRADAAKAIQSLNGHGYDHLILNVEWSK 269
+F+ ADA +A+ ++N + + WS+
Sbjct: 79 NFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 193 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQS 252
++ + N+S E I + G V + + ++ TG KG+ ++ F A AI++
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 253 LNGHGYDHLILNVE 266
LNG+ IL V+
Sbjct: 79 LNGYELSGRILRVD 92
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 190 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 240
D ++ + N+ A +I+ G G V ++ + ++ +GH KGFAYV F
Sbjct: 76 DAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEF 126
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 189 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 248
+ I I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 346
Query: 249 AIQSLNG 255
AI LNG
Sbjct: 347 AIAGLNG 353
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 189 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 248
+ I I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 346
Query: 249 AIQSLNG 255
AI LNG
Sbjct: 347 AIAGLNG 353
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 189 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 248
+ I I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 321
Query: 249 AIQSLNG 255
AI LNG
Sbjct: 322 AIAGLNG 328
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 189 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 248
+ I I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 324
Query: 249 AIQSLNG 255
AI LNG
Sbjct: 325 AIAGLNG 331
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 185 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 244
PV+ D + + + E D+ L + FG +++ + K+K TG KG A++ + R
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 245 DAAKAIQSLN 254
A + +L+
Sbjct: 82 SAVRCQATLH 91
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 181 RDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 240
R P + D + I LS E ++ L FG + ++ + + + G KG A+V +
Sbjct: 113 RPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADGASKGCAFVKY 171
Query: 241 KFRADAAKAIQSLNG 255
K DA AI +L+G
Sbjct: 172 KHGLDAHMAISALHG 186
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 185 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 244
PV+ D + + + E D+ L + FG +++ + K+K TG KG A++ + R
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 245 DAAKAIQSLN 254
A + +L+
Sbjct: 82 SAVRCQATLH 91
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 181 RDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 240
R P + D + I LS E ++ L FG + ++ + + + G KG A+V +
Sbjct: 113 RPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADGASKGCAFVKY 171
Query: 241 KFRADAAKAIQSLNG 255
K DA AI +L+G
Sbjct: 172 KHGLDAHMAISALHG 186
>AL117204-23|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 215 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQ 272
FG V + + + +G +GF +V F DAA AI ++N + V +++PP+
Sbjct: 34 FGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPK 91
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 215 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 255
FGP+ + ++ + +TGH K FA+V ++ A A +S+NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
+ +S++ E D+ + + FG + K LA+ + +GF Y+ F ++AI +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 254 N 254
N
Sbjct: 269 N 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 215 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 255
FGP+ + ++ + +TGH K FA+V ++ A A +S+NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
+ +S++ E D+ + + FG + K LA+ + +GF Y+ F ++AI +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 254 N 254
N
Sbjct: 269 N 269
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 215 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 255
FGP+ + ++ + +TGH K FA+V ++ A A +S+NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
+ +S++ E D+ + + FG + K LA+ + +GF Y+ F ++AI +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 254 N 254
N
Sbjct: 269 N 269
>Z78536-3|CAB01717.1| 270|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 270
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 188 REDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 247
+ D T++ + N+S +AD+ DL +G + ++ + K + +A+V ++ + A
Sbjct: 125 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQR------YAFVRYEKKECAT 178
Query: 248 KAIQSLNG 255
KAI +NG
Sbjct: 179 KAIMEMNG 186
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 215 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 268
FG V + + ++ T KG+ +V F + +A AI +NG + W+
Sbjct: 50 FGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWA 103
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 221 LYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNV 265
++L ++ +G KGFAYV F+ AI LNG + + +L V
Sbjct: 41 IHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKV 85
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 35.1 bits (77), Expect = 0.055
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 12 ADEVEIDQGVLPPPSEVVE-NGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKT 70
AD I +GV P E+ + NGL V E Y+ND +K +T + +V S K K
Sbjct: 321 ADASIILKGVHPKAPEIFQSNGLDSVIEKYYNNDFEKSAQQKTSSSKNKVAEPSFKKSKR 380
Query: 71 WSKFGDSASD 80
+ D SD
Sbjct: 381 QEESDDEESD 390
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.1 bits (77), Expect = 0.055
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
I I L++ E DI+ +G+G + + L GF +V F + DA A+ L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDL 56
Query: 254 NGH--GYDHLILNVEWSKP 270
NG G + +IL ++SKP
Sbjct: 57 NGKELGGERVIL--DYSKP 73
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.1 bits (77), Expect = 0.055
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
I I L++ E DI+ +G+G + + L GF +V F + DA A+ L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDL 56
Query: 254 NGH--GYDHLILNVEWSKP 270
NG G + +IL ++SKP
Sbjct: 57 NGKELGGERVIL--DYSKP 73
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.1 bits (77), Expect = 0.055
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
I I L++ E DI+ +G+G + + L GF +V F + DA A+ L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDL 56
Query: 254 NGH--GYDHLILNVEWSKP 270
NG G + +IL ++SKP
Sbjct: 57 NGKELGGERVIL--DYSKP 73
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 225 KEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVE 266
K K H +AYV F+ DA KAI ++G+ Y IL+ +
Sbjct: 55 KSKKVRHMSDYAYVTFETPEDAQKAINLVDGYDYKKFILSAQ 96
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 34.3 bits (75), Expect = 0.095
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 199 LSNFAVEADIDDLVKGF----GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 250
+ N E D L+ F GPV + + ++K TG KGFA+V+FK + + A+
Sbjct: 250 VGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 210 DLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHG 257
++ +G + +K+T +CKG+ +V F+ AA A+ LN G
Sbjct: 125 EMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLNTEG 172
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 210 DLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHG 257
++ +G + +K+T +CKG+ +V F+ AA A+ LN G
Sbjct: 99 EMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLNTEG 146
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 184 PPVRRE----DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVH 239
PP E D ++ I N+ + +I++ KG G + K + K+K T K FAY+
Sbjct: 43 PPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIE 102
Query: 240 FKFRADAAKAIQSLNG 255
F + A+ +NG
Sbjct: 103 FDDSSSIENAL-VMNG 117
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 184 PPVRRE----DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVH 239
PP E D ++ I N+ + ++++ KG G + + + K+K T K FAY+
Sbjct: 49 PPTEEEQKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIE 108
Query: 240 FKFRADAAKAIQSLNG 255
F + A+ +NG
Sbjct: 109 FDDSSSIENAL-VMNG 123
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 188 REDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 241
+ D ++ + N+ + ++I++ G V ++ + K+K TG+ K FA+V F+
Sbjct: 42 KTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
>Z99270-1|CAB16470.3| 497|Caenorhabditis elegans Hypothetical
protein Y37A1A.3 protein.
Length = 497
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 89 TNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVI 125
TN A+ F++F+ + + S PDD EL L+ S ++
Sbjct: 46 TNPAQGAFIKFLNASKHSNNPDDNELSHLENEWSFIV 82
>Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical
protein M03B6.4 protein.
Length = 306
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 51 VRTYKIEKRVVSKSIAKRKTWSKFGDSASDKP----GPNPATTNVAE 93
+ YKI +S + KRKT KFGD A D P NP TT+ E
Sbjct: 6 ISQYKINISSLSSPL-KRKTTRKFGDDAYDSPKYFMEGNPTTTSTFE 51
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical
protein ZC373.4 protein.
Length = 1211
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 172 PSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVK-----GFGPVHKLYLAKE 226
PS +G+I + P ++ + + N D L + G G K+Y E
Sbjct: 5 PSGSGKIKVDEHYPSELDEPPVFDVKKIENIRANVKFDTLYQVTKLLGDGKFGKVYCVIE 64
Query: 227 KSTGHCKGFAYVHFKFRADAAKA 249
K TG K FA K R +A +A
Sbjct: 65 KETG--KEFAAKFIKIRKEADRA 85
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/83 (26%), Positives = 35/83 (42%)
Query: 172 PSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGH 231
PS+A P D + + + E D L + +G V + ++KST
Sbjct: 35 PSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQA 94
Query: 232 CKGFAYVHFKFRADAAKAIQSLN 254
KG +V F R DA +A +L+
Sbjct: 95 SKGCCFVTFYHRKDAIEAQGALH 117
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/83 (26%), Positives = 35/83 (42%)
Query: 172 PSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGH 231
PS+A P D + + + E D L + +G V + ++KST
Sbjct: 35 PSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQA 94
Query: 232 CKGFAYVHFKFRADAAKAIQSLN 254
KG +V F R DA +A +L+
Sbjct: 95 SKGCCFVTFYHRKDAIEAQGALH 117
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
+ + L + A +++++ FG + K+++A+ GFA+V + DA A+++L
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP-----GFAFVEYDDVRDAEDAVRAL 59
Query: 254 NG 255
+G
Sbjct: 60 DG 61
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
+ + L + A +++++ FG + K+++A+ GFA+V + DA A+++L
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP-----GFAFVEYDDVRDAEDAVRAL 59
Query: 254 NG 255
+G
Sbjct: 60 DG 61
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
+ + L + A +++++ FG + K+++A+ GFA+V + DA A+++L
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP-----GFAFVEYDDVRDAEDAVRAL 59
Query: 254 NG 255
+G
Sbjct: 60 DG 61
>Z66521-9|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 253
+ I L N A + D++ +G+G + + + GF +V F+ + DA A+ L
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKN--------GFGFVDFQDQRDADDAVHDL 55
Query: 254 NG 255
NG
Sbjct: 56 NG 57
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 182 DQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 241
D PP R+ + I LS+ + + + +GPV + ++ +T H +GF +V F
Sbjct: 43 DSPPQLRK----LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFA 98
Query: 242 --FRADAA 247
F A++A
Sbjct: 99 SIFSAESA 106
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 182 DQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 241
D PP R+ + I LS+ + + + +GPV + ++ +T H +GF +V F
Sbjct: 63 DSPPQLRK----LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFA 118
Query: 242 --FRADAA 247
F A++A
Sbjct: 119 SIFSAESA 126
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 182 DQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 241
D PP R+ + I LS+ + + + +GPV + ++ +T H +GF +V F
Sbjct: 64 DSPPQLRK----LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFA 119
Query: 242 --FRADAA 247
F A++A
Sbjct: 120 SIFSAESA 127
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 13 DEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTY-KIEKRVVSKSIAKRKTW 71
D V+ID+ + +E+V+ +IVT++ + +V I+ Y K+ ++ K IA R+ W
Sbjct: 90 DLVDIDEIIPKTKTEIVDEKEQIVTDF----ERYRVLIINDYKKVSEKHYLKKIADREFW 145
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 183 QPPVRREDV--TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 240
+P V D T I + L + + + + FG + + + +++T +G+ +V
Sbjct: 24 EPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTM 83
Query: 241 KFRADAAKAIQSLN 254
K RA A +A + N
Sbjct: 84 KDRASAERACKDPN 97
>Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 30 ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATT 89
E LK T D+ KK +T+ + K + +RK + K S K G +P
Sbjct: 414 EQELKPTTIAPGDSKVKKPHKAKTFSTGNKKDQKKVEERKLYVK----KSSKLGSSPLDV 469
Query: 90 NVAEDVFMQFITSKEESQRPDDGELDG 116
++ FI+ K PD+ L G
Sbjct: 470 KISTQCTFGFISVKVSPGNPDNHNLVG 496
>Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 30 ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATT 89
E LK T D+ KK +T+ + K + +RK + K S K G +P
Sbjct: 414 EQELKPTTIAPGDSKVKKPHKAKTFSTGNKKDQKKVEERKLYVK----KSSKLGSSPLDV 469
Query: 90 NVAEDVFMQFITSKEESQRPDDGELDG 116
++ FI+ K PD+ L G
Sbjct: 470 KISTQCTFGFISVKVSPGNPDNHNLVG 496
>Z70270-1|CAB61007.1| 407|Caenorhabditis elegans Hypothetical
protein C53D6.2 protein.
Length = 407
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 42 DNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFIT 101
DND+++ ++ +K +S+ I+ W FG+ S + A +A DV + +
Sbjct: 250 DNDDREP--IKRKNGKKNSLSEEISSEDVWQGFGEETSREERERIANEELANDVRVVLLQ 307
Query: 102 SKEESQRPDDGELDGLK 118
+K + +G L LK
Sbjct: 308 NKNRCHK--EGVLVSLK 322
>AF029887-1|AAC48376.1| 407|Caenorhabditis elegans UNC-129 protein.
Length = 407
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 42 DNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFIT 101
DND+++ ++ +K +S+ I+ W FG+ S + A +A DV + +
Sbjct: 250 DNDDREP--IKRKNGKKNSLSEEISSEDVWQGFGEETSREERERIANEELANDVRVVLLQ 307
Query: 102 SKEESQRPDDGELDGLK 118
+K + +G L LK
Sbjct: 308 NKNRCHK--EGVLVSLK 322
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 190 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 249
D T ++N + +A I+ + GP+ +++AK GFA+V FK A A
Sbjct: 27 DATEKELNNDALTIYDA-IEAVFSVMGPIKSIWMAKRPP-----GFAFVTFKRTVHAFDA 80
Query: 250 IQSLNGHGYDHLILNVE 266
++ LNG L VE
Sbjct: 81 VKYLNGKKICDLEAKVE 97
>Z81494-4|CAB04050.2| 319|Caenorhabditis elegans Hypothetical
protein F02E9.3 protein.
Length = 319
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 13 DEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWS 72
D + + PPS LK + K D +K+ K + K KR+ S++I K WS
Sbjct: 47 DSLRSSKSSSSPPSRNSSLNLKTL---KKDRKSKEGKPKSSSKHGKRMTSRAIHVSKKWS 103
Query: 73 KFGDSASDKPGPNPATTNVAEDV 95
+F + T + ED+
Sbjct: 104 QFNRREDKTDYLDDETMQILEDL 126
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 27 EVVENGLKIVTEYKYDNDNKKVKIV 51
+ V+ K+V +YKY NDN +V I+
Sbjct: 394 QYVDFAKKLVAQYKYGNDNTRVGII 418
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 27 EVVENGLKIVTEYKYDNDNKKVKIV 51
+ V+ K+V +YKY NDN +V I+
Sbjct: 407 QYVDFAKKLVAQYKYGNDNTRVGII 431
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 4.7
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 173 SSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADI----DDLVKGF-GPVHKLYLAKEK 227
+S R G D +E V IS +N A AD+ D+ K GP K+Y ++
Sbjct: 185 ASGNREFGSDGRVELKETVFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYT--DR 242
Query: 228 STGHCKGFAYVHFKFRADAAKAIQSLNGHGY 258
+TG KG + F + A +AI NG +
Sbjct: 243 NTGEPKGECMITFVDASAAQQAITMYNGQPF 273
>AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical
protein Y37E3.17a protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 185 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 244
P RE ++A+ S++S+ +++ GPV + STG +Y F RA
Sbjct: 605 PKSREVLSALTKSDVSDEGFPQKSTRMIR-LGPVGVVCARSSTSTGQ---LSYELFHNRA 660
Query: 245 DAAKAIQSLNGHGYDHLILN 264
+ AK ++ G +H I+N
Sbjct: 661 ETAKLYNAVMSAGREHGIVN 680
>AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical
protein Y37E3.17b protein.
Length = 837
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 185 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 244
P RE ++A+ S++S+ +++ GPV + STG +Y F RA
Sbjct: 612 PKSREVLSALTKSDVSDEGFPQKSTRMIR-LGPVGVVCARSSTSTGQ---LSYELFHNRA 667
Query: 245 DAAKAIQSLNGHGYDHLILN 264
+ AK ++ G +H I+N
Sbjct: 668 ETAKLYNAVMSAGREHGIVN 687
>Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical
protein Y57G11A.1b protein.
Length = 500
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 27 EVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 86
E ++ G+ + +K DN + + R++ ++ S + RK++ SA D P
Sbjct: 125 EALKGGVSVKDRFKERGDNDEQVVERSWNKDELSTSAAAEARKSF--MAGSAYDAANPVE 182
Query: 87 ATTNVAEDV-FMQFITSKEESQRPDDG 112
T +D+ F Q K++ ++ ++G
Sbjct: 183 KTVKDLDDLKFGQLKGFKDKFEKGEEG 209
>Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical
protein Y57G11A.1a protein.
Length = 598
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 27 EVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 86
E ++ G+ + +K DN + + R++ ++ S + RK++ SA D P
Sbjct: 125 EALKGGVSVKDRFKERGDNDEQVVERSWNKDELSTSAAAEARKSF--MAGSAYDAANPVE 182
Query: 87 ATTNVAEDV-FMQFITSKEESQRPDDG 112
T +D+ F Q K++ ++ ++G
Sbjct: 183 KTVKDLDDLKFGQLKGFKDKFEKGEEG 209
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 13 DEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAK----- 67
DEVE+ + V+N KIV + K++ + + +R K+E ++ K IAK
Sbjct: 331 DEVEVQDEEIKESRADVDNLRKIVNDLKHEIKMSESQ-MRRKKVEIMLIRKEIAKAQKQL 389
Query: 68 RKTWSKFG 75
R+ KFG
Sbjct: 390 REALGKFG 397
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 30 ENGLKIVTEYKYDNDNKKV----KIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPN 85
+N K + E K ++ +K + K V+ + ++ +K + + WSK + ++ P
Sbjct: 165 DNKFKKMAEAKKEDGSKNLRNNLKTVKKESVFTQIANKKKSDKPEWSKKKEEKKEESAPE 224
Query: 86 PATTNVAEDVFMQFITSKEESQRPDD 111
P V E+ +EE + ++
Sbjct: 225 PVIEPVEEEETAASEGEEEEEEADEE 250
>Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical
protein D2045.6 protein.
Length = 780
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 6 EFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSI 65
E A + D++ +P +E+ E KI+ +KY +D T KR++S+
Sbjct: 424 ELLARYCDQLLRKSSKMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELS 483
Query: 66 AKRKTWSKF 74
A + + F
Sbjct: 484 ASDEAEANF 492
>U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein.
Length = 780
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 6 EFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSI 65
E A + D++ +P +E+ E KI+ +KY +D T KR++S+
Sbjct: 424 ELLARYCDQLLRKSSKMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELS 483
Query: 66 AKRKTWSKF 74
A + + F
Sbjct: 484 ASDEAEANF 492
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 194 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQS 252
IR+ L A E DI + G ++ +TG G AYV FK +A KA+++
Sbjct: 66 IRLRGLPFNATEKDIHEFFAGLTIERVKFVC---TTGRPNGEAYVEFKNTEEAGKAMEN 121
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 30 ENGLKIVTEYKYDNDNKKV----KIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPN 85
+N K + E K ++ +K + K V+ + ++ +K + + WSK + ++ P
Sbjct: 165 DNKFKKMAEAKKEDGSKNLRNNLKTVKKESVFTQIANKKKSDKPEWSKKKEEKKEESAPE 224
Query: 86 PATTNVAEDVFMQFITSKEESQRPDD 111
P V E+ +EE + ++
Sbjct: 225 PVIEPVEEEETAASEGEEEEEEADEE 250
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 82 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDG 116
P P P TT V E+ ++ S + PDDG DG
Sbjct: 79 PTPEPTTTPVEEEK-VKVSPSSSTKEYPDDGGYDG 112
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 196 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 255
+ N+ A + ++ L FG V + K G KG A+V F A A K + S +
Sbjct: 687 VRNVHFQATDDELKALFSKFGTVTSVRRVTHKD-GKPKGIAFVDFDTEASAQKCVASGDK 745
Query: 256 HGYDHLILNVEWSKPP 271
L V S PP
Sbjct: 746 LMLRERELEVALSNPP 761
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 203 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD--- 259
A E D++ +KG+G ++ + + GFA+V F+ DA A L+G +
Sbjct: 13 ARERDVERFLKGYGKINNISMKY--------GFAFVDFEDSRDAEDACHDLDGKTMEGSS 64
Query: 260 -HLILNVEWSKPPQNN 274
L++ + KP N+
Sbjct: 65 MRLVVEMARGKPRGND 80
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 203 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD--- 259
A E D++ +KG+G ++ + + GFA+V F+ DA A L+G +
Sbjct: 13 ARERDVERFLKGYGKINNISMKY--------GFAFVDFEDSRDAEDACHDLDGKTMEGSS 64
Query: 260 -HLILNVEWSKPPQNN 274
L++ + KP N+
Sbjct: 65 MRLVVEMARGKPRGND 80
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 203 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD--- 259
A E D++ +KG+G ++ + + GFA+V F+ DA A L+G +
Sbjct: 13 ARERDVERFLKGYGKINNISMKY--------GFAFVDFEDSRDAEDACHDLDGKTMEGSS 64
Query: 260 -HLILNVEWSKPPQNN 274
L++ + KP N+
Sbjct: 65 MRLVVEMARGKPRGND 80
>AL032646-11|CAE46682.1| 193|Caenorhabditis elegans Hypothetical
protein Y54E2A.11b protein.
Length = 193
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 204 VEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD 259
+++ + +++ P KLY+ G C G + + A A++SLNG+ +D
Sbjct: 64 LQSVLKKVLERLDPAVKLYIPPSPEGG-CLGVLLTEWADQRSAQFAVKSLNGYAFD 118
>AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical
protein Y54E2A.11a protein.
Length = 725
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 204 VEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD 259
+++ + +++ P KLY+ G C G + + A A++SLNG+ +D
Sbjct: 64 LQSVLKKVLERLDPAVKLYIPPSPEGG-CLGVLLTEWADQRSAQFAVKSLNGYAFD 118
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.133 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,228,950
Number of Sequences: 27539
Number of extensions: 291625
Number of successful extensions: 746
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 649
Number of HSP's gapped (non-prelim): 127
length of query: 274
length of database: 12,573,161
effective HSP length: 80
effective length of query: 194
effective length of database: 10,370,041
effective search space: 2011787954
effective search space used: 2011787954
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
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