Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000366-TA|BGIBMGA000366-PA|IPR006544|P-type ATPase of
unknown pump specificity (type V), IPR001757|ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter, IPR008250|E1-E2
ATPase-associated region, IPR000150|Cof protein, IPR006069|ATPase,
P-type cation exchange, alpha subunit
         (1088 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   3.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   3.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   4.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   6.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   8.6  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 646 NSLKTETTQIIRELHMANMRLVMVTGDNIMTAMSVARGCFMVQPQ 690
           N+LK+E  +   +L  AN+ LV+ T  ++   M     C +   Q
Sbjct: 263 NNLKSENEEFKEKLLAANLCLVIYTLVSVSLVMVTCDACTIASKQ 307


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 646 NSLKTETTQIIRELHMANMRLVMVTGDNIMTAMSVARGCFMVQPQ 690
           N+LK+E  +   +L  AN+ LV+ T  ++   M     C +   Q
Sbjct: 263 NNLKSENEEFKEKLLAANLCLVIYTLVSVSLVMVTCDACTIASKQ 307


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 410 TLDIITIVVPPALPAAMTAGVVYSQ 434
           TL  + + +PP LPAA  A ++  Q
Sbjct: 117 TLSPVGVALPPTLPAAAAAALLPPQ 141


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 845 LYSLIQFFSILILYKHHSTLGNNQF 869
           LY+++  F I+ LY  HS+ G   F
Sbjct: 27  LYTIVHIFIIIALYA-HSSYGRENF 50


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 15/56 (26%), Positives = 21/56 (37%)

Query: 540  GPENTRYDNLTPSIVKPVSPTESTQNLDNYDPYTMEIPYEISGMCAPETLPENFST 595
            GP +T +D  T       +       L  Y  Y+ME+    SG     T P +  T
Sbjct: 1141 GPSDTWFDENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDGVRTTPIHCQT 1196


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,351
Number of Sequences: 317
Number of extensions: 11029
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 5
length of query: 1088
length of database: 114,650
effective HSP length: 64
effective length of query: 1024
effective length of database: 94,362
effective search space: 96626688
effective search space used: 96626688
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 48 (23.4 bits)