Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000365-TA|BGIBMGA000365-PA|IPR013753|Ras,
IPR002078|Sigma-54 factor, interaction region, IPR003579|Ras small
GTPase, Rab type, IPR001806|Ras GTPase
(181 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 2e-41
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 64 5e-11
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 64 8e-11
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 61 6e-10
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 58 3e-09
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 58 3e-09
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 54 9e-08
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 50 8e-07
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 50 8e-07
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 48 3e-06
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 46 1e-05
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 46 2e-05
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 44 6e-05
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 44 1e-04
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 43 1e-04
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 41 5e-04
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 41 7e-04
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 40 0.001
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 40 0.002
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 38 0.005
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 37 0.011
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 37 0.011
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 36 0.015
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 36 0.019
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 35 0.034
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 35 0.045
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 34 0.059
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 34 0.059
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.078
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.078
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 33 0.10
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 33 0.10
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 33 0.10
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_55465| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 33 0.18
SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 33 0.18
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 33 0.18
SB_30948| Best HMM Match : NACHT (HMM E-Value=0.0023) 33 0.18
SB_27497| Best HMM Match : Death (HMM E-Value=0.028) 33 0.18
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 33 0.18
SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_3097| Best HMM Match : NACHT (HMM E-Value=2e-10) 33 0.18
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 33 0.18
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 33 0.18
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 32 0.24
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 32 0.24
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 32 0.32
SB_56690| Best HMM Match : NACHT (HMM E-Value=0.015) 31 0.42
SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09) 31 0.42
SB_46341| Best HMM Match : UPF0079 (HMM E-Value=0.18) 31 0.42
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 31 0.42
SB_37187| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_27098| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_4410| Best HMM Match : NACHT (HMM E-Value=0.014) 31 0.42
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 31 0.55
SB_17545| Best HMM Match : NACHT (HMM E-Value=6.7e-10) 31 0.55
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 31 0.73
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 30 0.97
SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.97
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 29 1.7
SB_55554| Best HMM Match : AAA (HMM E-Value=0.022) 29 1.7
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 29 1.7
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10) 29 1.7
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 29 2.2
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 29 2.2
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 29 2.2
SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2) 29 2.9
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 28 3.9
SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 28 5.2
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 28 5.2
SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061) 27 6.8
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 27 6.8
SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_45651| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 27 9.0
SB_20720| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 27 9.0
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 165 bits (401), Expect = 2e-41
Identities = 85/174 (48%), Positives = 110/174 (63%), Gaps = 7/174 (4%)
Query: 1 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
MAA+EKV++ V+GDSGVGKTSL HLI H + I S WT+GC+VEVKL+ YKEG TF
Sbjct: 1 MAAVEKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTF 60
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQ 120
F+E WD+GGS H N+R +FY +G+ILVHDLTNRKS NL+KWLAE+LN +S
Sbjct: 61 FLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEVLN--ASKDLYG 118
Query: 121 HVDVDPEQFLGSTQVIERRYYSRVSPFSDKRRIPPYIMATSTPLSNNRPSQYMS 174
+ + + G T I Y F+ +IP ++ T L RPS+ S
Sbjct: 119 ANNKQKDSWFGFTTDIIEEY--DPEQFAG-NQIP--VIVVGTKLDQARPSRLTS 167
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 64.5 bits (150), Expect = 5e-11
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 7 VKVVVLGDSGVGKTSLTHLI--AHNKPILSPGWTVGCSVEVK------LHKYKEGTQAQN 58
+K + LGDSGVGKTSL + +H P P T+G K L+ E +
Sbjct: 107 IKFLALGDSGVGKTSLLYQYTDSHFNPRFVP--TIGIDFREKRVVHHPLNPDGERSTRGQ 164
Query: 59 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI-LNQDSSNP 117
++LWD G R+ F++ G +LV DLT+ +S VN++ WL+++ + NP
Sbjct: 165 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHAYCENP 224
Query: 118 TL--QHVDVDPEQF 129
+ ++D+D ++
Sbjct: 225 DIGSPYIDIDVNEY 238
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 63.7 bits (148), Expect = 8e-11
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
KVV +GDSGVGK+S H H++ P +T V+ ++ Q ++LWD
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQ--WKPSFTATIGVDFQIKTMNVNGQC---IAIQLWDT 952
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G R+ +++ GI++ +D+T S NL+KW+ +
Sbjct: 953 AGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSV 994
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 60.9 bits (141), Expect = 6e-10
Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K+V++GDSGVGK+SL N+ + T+G + + EG + ++WD
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQV-EGKIIK----AQVWDT 68
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 119
G +R +Y+ G +LV+DLT +K+ ++++WL E+ ++ ++PT+
Sbjct: 69 AGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEV--REHADPTI 118
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++GDSGVGK+SL L+ S + V+ K+ T T +++WD
Sbjct: 10 KLLLIGDSGVGKSSL--LLRFADDTFSNTYISTIGVDFKIRTL---TVDGKTIKLQIWDT 64
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G R +Y+ HGI+L++D+ ++ ++L +WL E+
Sbjct: 65 AGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEV 106
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 58.4 bits (135), Expect = 3e-09
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNKPILSP--GWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
+K++++G+SGVGK+SL L+ P G T+G +VK EG +A+ + +
Sbjct: 9 LKILIVGESGVGKSSL--LLRFTDDTFDPDIGATIGVDFKVKTLTV-EGNKAK----LAI 61
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
WD G R +Y+ G+ILV+D +R++ L++WL E+
Sbjct: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEV 106
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 58.4 bits (135), Expect = 3e-09
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
+++++GDS VGK+SL + + TVG V++ + K + + +++WD
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIK----LQIWDT 70
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAE 108
G R+ +Y+ T G ++++D+TNR S VN+ W E
Sbjct: 71 AGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKE 111
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 54.4 bits (125), Expect = 5e-08
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++GD+ VGKT L + G T+G +K +G + + +++WD
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDV-DGEKVK----LQIWDT 63
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWL 106
G R+ +Y G+I+ +D+TN+KS +L +WL
Sbjct: 64 AGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWL 102
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 54.4 bits (125), Expect = 5e-08
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
KV+V+GD GVGKTSL + TVG V ++ G + + ++ WD
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDI-HGDRVK----LQCWDT 67
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPE 127
G R +Y+ +ILV D+TNR + ++ +WL + + N L+ + +
Sbjct: 68 AGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKN-ILKVLVGNKT 126
Query: 128 QFLGSTQVIERRYYSRVSPFSD 149
G+++ + R + ++ F +
Sbjct: 127 DLKGASRKVNTRSAANLAEFEE 148
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 53.6 bits (123), Expect = 9e-08
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 1 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
MA+ K+KVV+ GD+ VGKTS + N+ +P T + E+ L + G+Q F
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNELEGTP--TAFANYELGL---EVGSQK---F 52
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQ-KWLAE 108
++LWD G+ + R + YQ + I+L D++NR++ ++ KWL E
Sbjct: 53 LLDLWDTEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPE 101
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 50.4 bits (115), Expect = 8e-07
Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K+V+ GD+ VGK+S + N+ + T+G ++K +G T+ ++LWD
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKT-LVVDG----KTYALQLWDT 498
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNP 117
G R+ +++ G++L++D+T S ++++ W+ E + + S P
Sbjct: 499 AGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWV-EAIEESCSKP 547
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 50.4 bits (115), Expect = 8e-07
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 62 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
+++WD G R +Y+ THG+I+V+D+T+ + VN+++WL EI
Sbjct: 28 LQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEI 75
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 59 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
T +++WD G R +Y+ HGII+V+D+T+++S N+++WL EI
Sbjct: 77 TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEI 127
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 48.4 bits (110), Expect = 3e-06
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 1 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
M I + K+V+LG+S VGK+SL + T+G + + + T
Sbjct: 16 MGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-----TTV 70
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 116
E+WD G + + ++Y+ I+V+D+TN+ + + W+ E+ Q S N
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPN 126
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++G+S VGKTS A + + TVG +VK ++ + + +++WD
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKT-VFRNDKRVK----LQIWDT 77
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKS 98
G +R +Y+ G IL++D+TN +S
Sbjct: 78 AGQERYRTITTAYYRGAMGFILMYDITNEES 108
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 62 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
+++WD G +Y+ GI+LV+D+TN KS N+ KWL +I
Sbjct: 7 LQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKI 54
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 44.4 bits (100), Expect = 6e-05
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVE 63
+++ KVVVLG GVGK++LT + + T+ KE N +E
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYR------KEIEVDNNPSILE 54
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSS 115
+ D G+ + RD++ + G +LV+ L NR++ +L+ A+IL S
Sbjct: 55 ILDTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGS 106
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
KVV+LG++GVGKTSL + + N +PG ++ K+ + + Q T + +WD
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENH--FTPGRRNTIGID-SCSKFVKIGEKQVT--LSVWDT 67
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWL 106
G R +Y+ H IL+ ++ + S L W+
Sbjct: 68 AGVERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWI 106
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFF-VELWD 66
K++++GDS VGKT L + + K T+G +++ + F ++LWD
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDF------WEKSLELNGEFVKLQLWD 101
Query: 67 VGGSNGHRNTRDV-FYQPTHGIILVHDLTNRKSQVNLQKWLAE 108
G R + +Y+ + ++ ++D+T + S L W+ E
Sbjct: 102 TAGQERFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVE 144
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
W+ G R +Y+ HG+++V+D+T R+S NL KWL E+
Sbjct: 374 WEAGQER-FRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEV 417
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 42.3 bits (95), Expect = 2e-04
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
+ VK+VV+GD GVGK++ N PG + + +A N V L
Sbjct: 4 QNVKLVVVGDGGVGKSAFLITATTN---AFPGEYIPTVFDNYSSNIMLDGKAYN---VGL 57
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQ-KWLAEILNQDSSNPTL 119
WD G + R + Y T ++ D+ +R S N++ KWL E+ + P +
Sbjct: 58 WDTAGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKI 113
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 41.1 bits (92), Expect = 5e-04
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYK-EGTQAQNTFFVELWD 66
KV+VLGD VGK+SL ++ T+G V+ +H + +G + + ++LWD
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIG--VDFFIHDFDLDGKKVK----LQLWD 65
Query: 67 VGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQK-WLAE 108
G +R F++ G +LV D++ ++S +++ WL E
Sbjct: 66 TAGEEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHE 108
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 40.7 bits (91), Expect = 7e-04
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
++ V+++GDS GKT+L + N+ TV S+ + +G + + T LW
Sbjct: 232 RIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVE--VDGERIELT----LW 285
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVN-LQKWLAEILNQDSSNPTL 119
D G + + R + Y +++ D++ K+ + L+KW+ E+ + + P L
Sbjct: 286 DTSGHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVL 340
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 14 DSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGH 73
D GVGK+SL + K T+G K K +G ++ +++WD G
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKL-DG----ESYTLQIWDTAGQERF 273
Query: 74 RNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEIL 110
++ R FY+ + +LV+ + + KS NL W E L
Sbjct: 274 KSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFL 310
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/109 (24%), Positives = 60/109 (55%), Gaps = 10/109 (9%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
++++++++G GKT++ + + ++P+ + T+G +VEV +K N F +
Sbjct: 89 DELRLLMVGLDAAGKTTILYHLKLDEPVNTIP-TIGFNVEVVEYK--------NIKFT-V 138
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
WD+GG + R +++Q T G+I V D +R ++ L ++L ++
Sbjct: 139 WDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEE 187
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/109 (26%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
++++++++G GKT++ + + + I++ T+G +VE +K N F +
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGE-IVTTIPTIGFNVETVEYK--------NISFT-V 65
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
WDVGG + R ++Q T G+I V D +R+ ++ L +LN+D
Sbjct: 66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNED 114
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 37.9 bits (84), Expect = 0.005
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 1 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
MAAI K K+V++GD GKT L LI +K + +G Q +
Sbjct: 5925 MAAIRK-KLVIVGDGACGKTCL--LIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE--- 5978
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNL-QKWLAEI 109
+ LWD G + R + Y T I++ + + S N+ +KW E+
Sbjct: 5979 -LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV 6027
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 62 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 116
+++WD G R+ +Y+ G +LV+D+++R++ +L WL + S N
Sbjct: 146 LQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPN 200
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 36.7 bits (81), Expect = 0.011
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
+V++V+LG GKT++ + + K +S T+G +VE Q + +W
Sbjct: 19 QVRIVMLGLDAAGKTTILYKLKL-KETVSTIPTIGFNVET--------LQPTKNVTLTIW 69
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
DVGG + R ++Q T G++ V D ++ ++ L +L+ D
Sbjct: 70 DVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSD 117
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 77 RDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 118
R+ FY+ T G +LV+D+T+R+S L WL EI +D +P+
Sbjct: 7 RNEFYKDTQGALLVYDVTSRESFEALDIWLDEI-KKDIGSPS 47
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 77 RDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 118
R+ FY+ T G +LV+D+T+R+S L WL EI +D +P+
Sbjct: 2 RNEFYKDTQGALLVYDVTSRESFEALDIWLDEI-KKDIGSPS 42
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 36.3 bits (80), Expect = 0.015
Identities = 27/109 (24%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
++++++++G GKT++ + + + I++ T+G +VE + +N F +
Sbjct: 16 KQMRILMVGLDAAGKTTILYKLKLGE-IVTTIPTIGFNVE--------SVEYKNISFT-V 65
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
WDVGG + R ++Q T G+I V D +R+ ++ L ++L +D
Sbjct: 66 WDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQED 114
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 36.3 bits (80), Expect = 0.015
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
KV+V+GD GK S +N P+ P T+G +K ++ + T T +++W
Sbjct: 20 KVLVVGDILTGKQSFVKRYVNNIWHPLYKP--TIGVDFALKTIQWAQNT----TIRLQIW 73
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
+ G + V+Y+ +++ DL + + KW ++
Sbjct: 74 LIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDL 117
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 36.3 bits (80), Expect = 0.015
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 11 VLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGS 70
++G GKT++ + + + ++S T+G +VE +K N F +WD+GG
Sbjct: 1 MIGLDNAGKTTILYRLKLEE-VVSTVPTLGFNVETVTYK--------NISFT-VWDIGGQ 50
Query: 71 NGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
+ R V+YQ GII V D +R+ + L ++L ++
Sbjct: 51 DKIRALWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEE 93
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 35.9 bits (79), Expect = 0.019
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 1 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
MA + K+ V+G VGK+SLT + + S T+ + K KYK G + F
Sbjct: 1 MAPPKSRKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIE-NTFTKNIKYK-GQE----F 54
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRK 97
F+EL D G + + + HG ILV+ +T+ K
Sbjct: 55 FLELVDTAGQDEYSIFPQSYSMGIHGYILVYAVTSAK 91
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 35.9 bits (79), Expect = 0.019
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWD 66
+K++++G GKT+L H + + T G S+E + K+ + F ++WD
Sbjct: 552 MKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISME-EFRLKKDFLHRE--FIFKIWD 608
Query: 67 VGGSNGHRNTRDVFYQPTHGIILVHDL-TNRKSQVNLQKWLAEI 109
GG + T F ILV +L + L+ WL I
Sbjct: 609 FGGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTI 652
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 35.1 bits (77), Expect = 0.034
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 52 EGTQAQNTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILN 111
E + +N F +WDVGG + R ++Q T G+I V D +R+ ++ L+ +L
Sbjct: 503 ETVEYKNISFT-VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLA 561
Query: 112 QDSSNPTLQHVDVDPEQFLGSTQVI 136
+D + V + + F T+ +
Sbjct: 562 EDELRDAVLLVFANKQLFCVETRYV 586
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 34.7 bits (76), Expect = 0.045
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 5 EKVKVVVLGDSGVGKTSLT------HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQN 58
++ K+VV+G GVGK++LT H ++ P + + C ++ +
Sbjct: 10 KQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVID------------ER 57
Query: 59 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEIL 110
+++ D G R+ + + G +LV +T+R S + K+ +IL
Sbjct: 58 VAHLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQIL 109
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 34.3 bits (75), Expect = 0.059
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 78 DVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
D+ Y+ GI+LV+D+TN KS Q W+ I
Sbjct: 79 DIIYEDDKGIMLVYDITNDKSFEKHQNWIRNI 110
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 34.3 bits (75), Expect = 0.059
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 62 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKW 105
+++WD G R +Y+ +G+I+ +D+T + N+ +W
Sbjct: 97 LQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRW 140
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 33.9 bits (74), Expect = 0.078
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFV--ELW 65
K+V LGD GVGK+SL ++ T+G K T + F V ++W
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTK-------TVLLDDFEVRLQIW 217
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQ 112
D G R + + + ++V D+TN S ++ W+ + ++
Sbjct: 218 DTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDE 264
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 33.9 bits (74), Expect = 0.078
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSP--GW---TVGCSVEVK---LHKYKEGTQA 56
+ +K+V++GD+G+GK++L P + G+ T S E K L Y +
Sbjct: 4 QALKLVLVGDAGIGKSTLIAKCHETHPTSAECGGFFAKTFDRSAEYKPTALKAYSTNVYS 63
Query: 57 QNTFFV------ELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNL-QKWLAEI 109
T V + D GGS R + Y IL D+TNR S N+ KW EI
Sbjct: 64 NPTGVVYSVYQANIVDTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEI 123
Query: 110 LNQDSSNPTL 119
+ P +
Sbjct: 124 RLYEKKVPLM 133
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 33.5 bits (73), Expect = 0.10
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 8 KVVVLGDSGVGKTS-LTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQN-TFFVELW 65
++ +LGD GVGKT+ L + H +G KY++ + T +E+
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHR--------FLGEYDPTIEDKYRKSINIDDVTVTLEIL 58
Query: 66 DVG--GSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI-LNQDSSNPTLQHV 122
D G N + RD F + G I+V+ +R + NL ++ + L++D++ P+ +
Sbjct: 59 DTASRGQNSCK-LRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKLSRDTNLPSNRTR 117
Query: 123 DVDPEQFLG 131
D P+ G
Sbjct: 118 DTRPDSCPG 126
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 33.5 bits (73), Expect = 0.10
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
+WD G ++ ++Y+ ILV+D+T + +L+ W+ E+
Sbjct: 13 IWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIREL 58
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 33.5 bits (73), Expect = 0.10
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 73 HRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGS 132
+R +Y+ G +LV+D+ S +NL KW+ E L Q +S+ L + + + L
Sbjct: 5 YRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEE-LRQHASD-DLSIILIGNKSDLKH 62
Query: 133 TQVIERRYYSRVSPFSDKRRI--PPYIMATSTPLSNN 167
++IE R S D + PP ++++P S +
Sbjct: 63 LRMIENRRGSNSCSPGDPLVLERPPPRWSSNSPYSES 99
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG Q F
Sbjct: 759 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNQGGGVF 816
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 33.1 bits (72), Expect = 0.14
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 7 VKVVVLGDSGVGKTSLTH-LIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
+KVV +GD VGKTS + HN P G+ S+ K E + T V L
Sbjct: 10 IKVVFVGDKNVGKTSFLYAATTHNFP---TGFI--ASIFDGYSKTMEIDGKRYT--VLLC 62
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQK-WLAEILNQDSSNP 117
D G+ R ++Q +L D+ NR+S N++ WL + + S P
Sbjct: 63 DTPGTMHPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLETSDVP 115
>SB_55465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 32.7 bits (71), Expect = 0.18
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG Q F
Sbjct: 69 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNQGGGIF 126
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 32.7 bits (71), Expect = 0.18
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 7 VKVVVLGDSGVGKTSLT--HLIAH-NKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVE 63
V + +GD G GKT+ HL K ++ T+G V + G N
Sbjct: 33 VSFLQVGDGGTGKTTFVKRHLTGEFEKKYIA---TLGVEVHPLIFFTSRGPIKFN----- 84
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKW 105
+WD G RD +Y I++ D+T+R + N+ W
Sbjct: 85 VWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNW 126
>SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 32.7 bits (71), Expect = 0.18
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG Q F
Sbjct: 52 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNQGGGIF 109
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 32.7 bits (71), Expect = 0.18
Identities = 27/147 (18%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K +++G+SGVGK+ L + + + L V +V + ++ + + D
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLK---FVTSTVSMNDIFWEYFLYDNKKIKLTIGDT 408
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPE 127
G + + +++ G+ LV D+T + + L +W+ ++ +Q + V +
Sbjct: 409 AGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGNK 468
Query: 128 QFLGSTQVIERRYYSRVSPFSDKRRIP 154
+ + + + YSR F+ P
Sbjct: 469 KDMEDNRAVT---YSRAKEFAAMNGFP 492
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 73 HRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGS 132
+R +Y+ G +LV+D+ S +NL KW+ E L Q +S+ L + + + L
Sbjct: 5 YRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEE-LRQHASD-DLSIILIGNKSDLKH 62
Query: 133 TQVIERR 139
++IE R
Sbjct: 63 LRMIENR 69
>SB_30948| Best HMM Match : NACHT (HMM E-Value=0.0023)
Length = 180
Score = 32.7 bits (71), Expect = 0.18
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNT 59
E KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG +
Sbjct: 66 EACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGVGI 125
Query: 60 F 60
F
Sbjct: 126 F 126
>SB_27497| Best HMM Match : Death (HMM E-Value=0.028)
Length = 892
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 43 VEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLT 94
V+ L + + + N ++ +WD G + T VF P +LVHDL+
Sbjct: 19 VQQLLQDVGKDSSSTNNIYIMIWDFAGQPTYCATHPVFMSPRALYLLVHDLS 70
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/97 (19%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 80 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPE-QFLGSTQVIER 138
+Y+ G +LV+D+ + N+++WL E+ + SN + V + + L + E
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEA 61
Query: 139 RYYSRVSPFSDKRRIPPYIMATSTPLSNNRPSQYMSP 175
+ ++ + +++I + + SNN + +++P
Sbjct: 62 KAFAEIYHIVSQKQIHDSPSSDGSHPSNNVQTIHVAP 98
>SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 32.7 bits (71), Expect = 0.18
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG Q F
Sbjct: 308 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNQGGGIF 365
>SB_3097| Best HMM Match : NACHT (HMM E-Value=2e-10)
Length = 295
Score = 32.7 bits (71), Expect = 0.18
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNT 59
E KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG +
Sbjct: 49 EACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGI 108
Query: 60 F 60
F
Sbjct: 109 F 109
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVD 123
+WD+GG + R ++Q GII V D +++ +++ L +L N V
Sbjct: 158 VWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNGVPVVVV 217
Query: 124 VDPEQFLGS 132
+ + LG+
Sbjct: 218 ANKQDLLGA 226
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 32.7 bits (71), Expect = 0.18
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNT 59
E KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG +
Sbjct: 615 EACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGI 674
Query: 60 F 60
F
Sbjct: 675 F 675
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 32.7 bits (71), Expect = 0.18
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVE 63
+++ KVVVLG GVGK++LT + G VE KY + +
Sbjct: 1 MKEYKVVVLGSGGVGKSALT-----------VQFVTGQFVE----KYDPTIE-------D 38
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSS 115
+ G+ + RD++ + G +LV+ L NR++ +L+ A+IL S
Sbjct: 39 FYHTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGS 90
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 32.3 bits (70), Expect = 0.24
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 9/107 (8%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF-FVE 63
E++K V++GD GVGKTSL L+++ + G+ V Y + +E
Sbjct: 17 EQLKCVIVGDGGVGKTSL--LVSY----MMDGFP-NSYVPTAFDTYHVTVEVNKKLCMIE 69
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNL-QKWLAEI 109
D G R + Y I+ + + S N+ KW+ EI
Sbjct: 70 FCDTAGQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEI 116
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 86 GIILVHDLTNRKSQVNLQKWLAEI 109
GI+LV+D+T RKS NLQ WL I
Sbjct: 58 GILLVYDITCRKSFDNLQFWLESI 81
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 31.9 bits (69), Expect = 0.32
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGC-----SVEVK---LHKYKEGTQAQ 57
++K++V+G G GKT+L + +P+ S TVG SV++ L + +
Sbjct: 666 RMKLMVVGIQGYGKTTLLAAL-KGQPLPSNLSTVGIVVDEWSVQISTSLLSRIGITSGIG 724
Query: 58 NTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQV-NLQKWLAEI 109
T + WD+ G + + +F P+ + V + T + V NL+ WL I
Sbjct: 725 PTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNI 777
>SB_56690| Best HMM Match : NACHT (HMM E-Value=0.015)
Length = 180
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 69 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 126
>SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09)
Length = 818
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 246 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 303
>SB_46341| Best HMM Match : UPF0079 (HMM E-Value=0.18)
Length = 156
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 69 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 126
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 31.5 bits (68), Expect = 0.42
Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
++ KVV++GD+GVGK+ + S W + + A N+ + L
Sbjct: 12 KQYKVVLVGDAGVGKS----FVIDRLNSTSEHWQGSRLYKPTTGGHASYFTASNSCHLYL 67
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILN 111
D G +R ++ + ++ L + S +L+KW + L+
Sbjct: 68 LDTSGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLD 114
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 31.5 bits (68), Expect = 0.42
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDS 114
+WD G ++ FY+ +LV D+T S L W E L Q S
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQAS 51
>SB_37187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 69 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 126
>SB_27098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 33 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 90
>SB_4410| Best HMM Match : NACHT (HMM E-Value=0.014)
Length = 127
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 16 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 73
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVG 40
KVV++GDSGVGK++L N+ L T+G
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIG 45
>SB_17545| Best HMM Match : NACHT (HMM E-Value=6.7e-10)
Length = 321
Score = 31.1 bits (67), Expect = 0.55
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 60
KV + GDSG GKT+LT +A + K +LS T V + +K + KEG Q F
Sbjct: 52 KVHLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNQGGGIF 109
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 31.1 bits (67), Expect = 0.55
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 60 FFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 119
F + +WDVGG R+ +++ T G+I V D +++ + + L +L ++ + +
Sbjct: 2 FKLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEELYHVLI 61
Query: 120 QHV 122
Q V
Sbjct: 62 QAV 64
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 30.7 bits (66), Expect = 0.73
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 5 EKVKVVVLGDSGVGKTSLTH 24
+++K+V+LG+SG GKTS H
Sbjct: 259 KRIKLVLLGESGAGKTSCAH 278
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 30.3 bits (65), Expect = 0.97
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 86 GIILVHDLTNRKSQVNLQKWLAEI 109
GI+LV+D+T K+ N+ KWL I
Sbjct: 127 GIMLVYDITQEKTFDNISKWLRNI 150
>SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 30.3 bits (65), Expect = 0.97
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 96 RKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQV-IERRYYS 142
R S +L W + + + PT QH+ V PE L S+ E R YS
Sbjct: 570 RDSHTSLDDWKKSVKRGNRALPTPQHLIVSPEDILASSPFDSESRRYS 617
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVG 40
K+V++GDSGVGK++L N+ L T+G
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIG 52
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 8 KVVVLGDSGVGKTSLTHLIAH 28
KV+V+GD GVGKTSL H
Sbjct: 673 KVLVIGDLGVGKTSLIKRYVH 693
>SB_55554| Best HMM Match : AAA (HMM E-Value=0.022)
Length = 1681
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 9 VVVLGDSGVGKTSLTHLIA 27
VVVLGD+G GKT+L H ++
Sbjct: 270 VVVLGDAGSGKTTLLHALS 288
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 29.5 bits (63), Expect = 1.7
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
+VVVLG GVGKTSL TVG E + K+ F+E+ D
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNA-----FLEIMDT 163
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKS 98
GS + + Q +LV+ + + S
Sbjct: 164 AGSYPFPAMKKLTIQNADAFVLVYSVDEKAS 194
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/60 (23%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 62 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLT---NRKSQVNLQKWLAEILNQDSSNPT 118
+++WD G + + T VF+ +L H+L+ N +++ +++ +A+I +++N T
Sbjct: 474 LDVWDFAGQHLYYATHPVFFSSRAVYVLTHNLSKNLNERAEPCMRQGVADIKLDNANNET 533
>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
Length = 280
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 9 VVVLGDSGVGKTSLTHLIAHNKPILS 34
+V+ G+SG GKT T LI H+ LS
Sbjct: 235 IVISGESGSGKTESTKLIVHHLTALS 260
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNT 59
E KV++ GDS GKT+LT +A + K +LS T V + +K + KEG +
Sbjct: 303 EACKVLLEGDSVAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGVGI 362
Query: 60 F 60
F
Sbjct: 363 F 363
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/17 (64%), Positives = 16/17 (94%)
Query: 7 VKVVVLGDSGVGKTSLT 23
VKVV++G+ GVGK++LT
Sbjct: 862 VKVVIIGEDGVGKSALT 878
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGW--TVGCSVEVKLHKYKEGTQA 56
+ KV+V GDS VGK++L + + + TVG V VKL E T +
Sbjct: 5 RAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIPETTDS 57
>SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2)
Length = 393
Score = 28.7 bits (61), Expect = 2.9
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWTV--GCSVEV-KLHKYKEGTQAQNTF 60
KV++ GDSG GKT+LT +A + K +LS T G + V K + KEG + F
Sbjct: 318 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEGELLLVWKCSEMKEGNEVVGIF 375
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 86 GIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 119
GI+LV+D+T S ++ +WL I +D+++P +
Sbjct: 4 GILLVYDITTEDSFKHISQWLQNI--EDNASPNV 35
>SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1627
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 9 VVVLGDSGVGKTSLTHLIAHNKPILSPGWT 38
+V+ GDSG GKTSL + A L P WT
Sbjct: 386 LVLYGDSGCGKTSLVAMTAK----LVPSWT 411
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 IEKVKVVVLGDSGVGKTSLT 23
+ ++VVVLG GVGK++LT
Sbjct: 14 VRSLRVVVLGQDGVGKSALT 33
>SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIA 27
++ V+V+V+G GVGKT + + +A
Sbjct: 12 VKAVRVMVMGQDGVGKTDIRYTLA 35
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 5 EKVKVVVLGDSGVGKTSL 22
E +K VV+G+SGVGKT L
Sbjct: 13 ELIKCVVVGNSGVGKTRL 30
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 5 EKVKVVVLGDSGVGKTSLT 23
E KV++ GDSG GKT+LT
Sbjct: 238 EACKVLLEGDSGAGKTTLT 256
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 7 VKVVVLGDSGVGKTSLT 23
V+VVVLG GVGK++LT
Sbjct: 17 VRVVVLGKDGVGKSALT 33
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 10 VVLGDSGVGKTSLTHLIAHNKPILSPGWTV---GCSVEVKLHKYKEGTQAQNTFFVELWD 66
VV G+SGVGKT++ A GW V C + +E TQ+ +++D
Sbjct: 649 VVFGESGVGKTTVIAKAARELQERHSGWVVLFRFCGITPTCSTGRELTQSLCEQIKQIYD 708
Query: 67 V 67
+
Sbjct: 709 I 709
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 75 NTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
+T + Y+ G ++V D+T+RKS + WL ++
Sbjct: 37 STVPLIYRALSGAVIVFDVTDRKSFERVPTWLDKV 71
>SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061)
Length = 152
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 9 VVVLGDSGVGKTSLTHLIAH 28
V V+G SG GKT+L +++AH
Sbjct: 51 VAVMGASGSGKTTLINVLAH 70
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 5 EKVKVVVLGDSGVGKTSL 22
EK +VVLG +GVGKT+L
Sbjct: 323 EKYSMVVLGAAGVGKTAL 340
>SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 5 EKVKVVVL-GDSGVGKTSLTHLIAHN 29
+KV+ V+L GDSG GKT+L IA++
Sbjct: 355 KKVRSVLLEGDSGAGKTTLCKKIAYD 380
>SB_45651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 60 FFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDL-TNRKSQVNLQKWLAEI 109
F ++WD GG + T F ILV +L + L+ WL I
Sbjct: 18 FIFKIWDFGGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTI 68
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNKPILS 34
+++V+LGDS VGKT L + + +S
Sbjct: 19 IRIVILGDSTVGKTCLLLQLCYKSNTMS 46
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNKP 31
+K+V+ GD GKT + H + H KP
Sbjct: 226 MKIVIKGDRNTGKTCMFHRL-HGKP 249
>SB_20720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 9 VVVLGDSGVGKTSLTHLIAHNKP 31
V+V+G S GKT+ TH + H P
Sbjct: 12 VMVVGPSQSGKTTWTHALLHQAP 34
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 63 ELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 116
++WD+GG +R + + T +I V D T+ + L +LN N
Sbjct: 69 KVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLN 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,457,962
Number of Sequences: 59808
Number of extensions: 256896
Number of successful extensions: 676
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 566
Number of HSP's gapped (non-prelim): 114
length of query: 181
length of database: 16,821,457
effective HSP length: 78
effective length of query: 103
effective length of database: 12,156,433
effective search space: 1252112599
effective search space used: 1252112599
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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