Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000365-TA|BGIBMGA000365-PA|IPR013753|Ras,
IPR002078|Sigma-54 factor, interaction region, IPR003579|Ras small
GTPase, Rab type, IPR001806|Ras GTPase
(181 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 46 9e-07
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 36 6e-04
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 26 0.59
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 26 0.59
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 26 0.59
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 25 1.8
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 5.5
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 23 7.3
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 23 7.3
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 45.6 bits (103), Expect = 9e-07
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K+V+LG+S VGK+SL + T+G + + + T E+WD
Sbjct: 26 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDD-----TTVKFEIWDT 80
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPE 127
G + + ++Y+ I+V+D+ N S + W+ E+ Q S N + +
Sbjct: 81 AGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKAD 140
Query: 128 QFLGSTQVIERRYYSRVSPFSDKRRIPPYIMATSTPLSNN 167
L +++V++ Y ++D R+ M TS + N
Sbjct: 141 --LANSRVVD---YEEAKQYADDNRL--LFMETSAKTAVN 173
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 36.3 bits (80), Expect = 6e-04
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 1 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVE-VKLHKYKEGTQAQNT 59
M++ +K VV+GD VGKT + LI++ PG V S + +G Q
Sbjct: 1 MSSGRPIKCVVVGDGTVGKTCM--LISYTTDSF-PGEYVPTSFDNYSAPMVVDGVQVS-- 55
Query: 60 FFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNL-QKWLAEILNQDSSNPT 118
+ LWD G + R + Y T ++ + + + S N+ KW EI + P
Sbjct: 56 --LGLWDTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPI 113
Query: 119 L 119
+
Sbjct: 114 I 114
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 26.2 bits (55), Expect = 0.59
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 9 VVVLGDSGVGKTSLTHLIAHNKP 31
+ V+G SG GKT+L + +A P
Sbjct: 129 LAVMGSSGAGKTTLLNALAFRSP 151
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 26.2 bits (55), Expect = 0.59
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 9 VVVLGDSGVGKTSLTHLIAHNKP 31
+ V+G SG GKT+L + +A P
Sbjct: 129 LAVMGSSGAGKTTLLNALAFRSP 151
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 26.2 bits (55), Expect = 0.59
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 9 VVVLGDSGVGKTSLTHLIAHNKP 31
+ V+G SG GKT+L + +A P
Sbjct: 107 LAVMGSSGAGKTTLLNALAFRSP 129
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 24.6 bits (51), Expect = 1.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 139 RYYSRVSPFSDKRRIPPY 156
RY R+ P+ D+ +PPY
Sbjct: 927 RYALRLLPWQDRNNLPPY 944
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.0 bits (47), Expect = 5.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 120 QHVDVDPEQFLGSTQVIERRYYSRVSPFSDKRRI 153
QH+ E+ + +T + R +R P S +RRI
Sbjct: 729 QHIKYVAERAVTNTNALVRMMPNRSGPRSSRRRI 762
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 22.6 bits (46), Expect = 7.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 80 FYQPTHGIILVH 91
FYQ THG++ H
Sbjct: 62 FYQATHGLLQTH 73
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 22.6 bits (46), Expect = 7.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 80 FYQPTHGIILVH 91
FYQ THG++ H
Sbjct: 62 FYQATHGLLQTH 73
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.318 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,144
Number of Sequences: 2123
Number of extensions: 7467
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 9
length of query: 181
length of database: 516,269
effective HSP length: 60
effective length of query: 121
effective length of database: 388,889
effective search space: 47055569
effective search space used: 47055569
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)
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