Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000365-TA|BGIBMGA000365-PA|IPR013753|Ras,
IPR002078|Sigma-54 factor, interaction region, IPR003579|Ras small
GTPase, Rab type, IPR001806|Ras GTPase
(181 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-38|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 97 9e-21
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 69 3e-12
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 65 3e-11
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 65 3e-11
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 61 4e-10
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 60 1e-09
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 59 2e-09
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 58 3e-09
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 58 3e-09
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 58 3e-09
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 58 4e-09
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 58 4e-09
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 58 4e-09
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 58 5e-09
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 57 6e-09
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 56 1e-08
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 56 1e-08
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 56 1e-08
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 56 2e-08
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 56 2e-08
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 54 6e-08
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 53 1e-07
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 52 2e-07
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 50 7e-07
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 50 7e-07
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 50 7e-07
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 50 7e-07
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 50 7e-07
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 50 1e-06
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 50 1e-06
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 49 2e-06
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 49 2e-06
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 46 2e-05
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 45 4e-05
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 40 8e-04
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 40 8e-04
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 39 0.002
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 39 0.002
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 39 0.002
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 39 0.002
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 38 0.004
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 38 0.004
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 38 0.004
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 37 0.010
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 37 0.010
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 36 0.013
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 36 0.013
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 36 0.017
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 36 0.022
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 36 0.022
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 36 0.022
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 36 0.022
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 36 0.022
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 35 0.029
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 35 0.029
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 35 0.029
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 35 0.029
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 35 0.029
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 35 0.039
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 34 0.052
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 34 0.052
Z81039-11|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 34 0.068
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 34 0.068
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.090
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 33 0.090
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 33 0.12
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 32 0.21
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 32 0.21
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 32 0.21
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 32 0.21
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 32 0.21
AF045637-2|AAN63433.1| 168|Caenorhabditis elegans R-ras related... 32 0.21
AF045637-1|AAK72295.1| 212|Caenorhabditis elegans R-ras related... 32 0.21
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 32 0.27
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 31 0.48
U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin fam... 31 0.48
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 31 0.63
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 30 0.84
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 30 1.1
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 30 1.1
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 29 1.9
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 29 1.9
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 29 1.9
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 29 2.6
Z99281-9|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 28 3.4
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 28 3.4
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 28 3.4
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 28 4.5
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 28 4.5
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 27 5.9
U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical pr... 27 7.8
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 27 7.8
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 27 7.8
>AL117204-38|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 96.7 bits (230), Expect = 9e-21
Identities = 49/103 (47%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGW----TVGCSVEVKLHKYKEGTQAQNTFFVE 63
K++VLGDS VGKTSL H IA G T+G +V + H+Y+ GT Q T +E
Sbjct: 10 KILVLGDSCVGKTSLCHCIAGGGEPPGGGRSFDSTIGATVVMAWHEYRAGTPEQRTELLE 69
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWL 106
LWD+GG HR VF++ G ILVHDLTN++S+ NL WL
Sbjct: 70 LWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRSEENLATWL 112
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 68.5 bits (160), Expect = 3e-12
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++GDSGVGK+SL A N S + V+ K+ Q +++WD
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNT--FSENYITTIGVDFKIRTMDINGQRVK---LQIWDT 66
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSS 115
G R +Y+ THG+++V+D+TN +S N+++WL EI N S
Sbjct: 67 AGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDS 114
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 65.7 bits (153), Expect = 2e-11
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K+VV+GD GK+ + A N + T+G V+ KL K G ++ +ELWD
Sbjct: 8 KIVVVGDHNCGKSCILLRFAENSFRMDHISTLG--VDFKLKTIKLG---RDKIRLELWDT 62
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQK-WLAEILNQDSSNPTLQHV---- 122
G +R + +Y HG++ V+D+TN KS NL+K WL EI N L V
Sbjct: 63 AGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKA 122
Query: 123 DVDPEQ 128
D+D E+
Sbjct: 123 DMDQER 128
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 64.9 bits (151), Expect = 3e-11
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKE-----GTQAQNTFF 61
+K + LGDSGVGKTS H N TVG + K YK G + Q
Sbjct: 8 IKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVL- 66
Query: 62 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
++LWD G R+ F++ G IL+ D+TN +S +N++ WL+++
Sbjct: 67 LQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQL 114
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 64.9 bits (151), Expect = 3e-11
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKE-----GTQAQNTFF 61
+K + LGDSGVGKTS H N TVG + K YK G + Q
Sbjct: 8 IKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVL- 66
Query: 62 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
++LWD G R+ F++ G IL+ D+TN +S +N++ WL+++
Sbjct: 67 LQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQL 114
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 61.3 bits (142), Expect = 4e-10
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
KVV +GDS VGKT H HN KP+ + T+G VK K ++LW
Sbjct: 204 KVVFVGDSAVGKTCFLHRFCHNRFKPLFNA--TIGVDFTVKTMKIPPN----RAIAMQLW 257
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
D G R+ +++ G++L+ D+T+ +S +N++ W+ +
Sbjct: 258 DTAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSV 301
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 59.7 bits (138), Expect = 1e-09
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++GDSGVGK+ L A + S T+G +++ + +G T +++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG----KTIKLQIWDT 67
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G R +Y+ HGII+V+D+T++++ N+++WL EI
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEI 109
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K+V++GD GVGKT + + + G T+G +K +G + + +++WD
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKT-LVVDGKRVK----LQIWDT 66
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
GG R +Y+ +GI+L +D+T ++S +LQ+W+ ++
Sbjct: 67 GGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDV 108
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 58.4 bits (135), Expect = 3e-09
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
+++V+GDS VGK+SL K TVG ++ + + G + + ++LWD
Sbjct: 19 RLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVK----LQLWDT 74
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAE-ILNQDSSNPT 118
G R+ +Y+ + G++ ++D TNR+S +++ W+ E LN +P+
Sbjct: 75 AGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPS 126
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 58.4 bits (135), Expect = 3e-09
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
KVV++GDSGVGK++L N+ L T+G + EG T ++WD
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISV-EG----KTVKAQIWDT 67
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHV 122
G +R +Y+ G +LV+D+ + N+++WL E+ + N + V
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPV 122
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 58.4 bits (135), Expect = 3e-09
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 6 KVKVVVLGDSGVGKTSLTH---LIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFV 62
K KVVVLGDSGVGKTS+ + AH +P+ + T+G S V + ++ +
Sbjct: 52 KAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNA---TIGASF-VSFDVGADYRDREDVVRL 107
Query: 63 ELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHV 122
++WD G R ++ + ++V+D+T+R + +++KWL ++ D S+ T
Sbjct: 108 QVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDL---DRSSGT---E 161
Query: 123 DVDPEQFLGSTQVIERRYYSRVSPFSDKRRIPPYIMATSTPLSNNRPSQY 172
D + T ++E+R + ++ + + I A LSN++P+ +
Sbjct: 162 DANVYLIGNKTDLVEKREVTE----AEGKAMAAKINAKFFELSNDQPNLF 207
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 58.0 bits (134), Expect = 4e-09
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 8 KVVVLGDSGVGKTSLTHLI---AHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
K++++GDSGVGKT + + A N +S T+G ++K + K G + + +++
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFIS---TIGIDFKIKTIELK-GKKIK----LQI 62
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
WD G +Y+ GI+LV+D+TN KS N+ KWL I
Sbjct: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 58.0 bits (134), Expect = 4e-09
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 8 KVVVLGDSGVGKTSLTHLI---AHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
K++++GDSGVGKT + + A N +S T+G ++K + K G + + +++
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFIS---TIGIDFKIKTIELK-GKKIK----LQI 62
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
WD G +Y+ GI+LV+D+TN KS N+ KWL I
Sbjct: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 58.0 bits (134), Expect = 4e-09
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
KVV++GDSGVGK++L N+ L T+G + EG T ++WD
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV-EG----KTVKAQIWDT 67
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 116
G +R +Y+ G +LV+D+ + N+++WL E+ + N
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQN 116
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 57.6 bits (133), Expect = 5e-09
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
KVV++G++GVGKT L I PG + V+ + K G + +++WD
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQG--IFPPGQSATIGVDFMIKTVKVGN---DKIKLQIWDT 63
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G R+ +Y+ H I+LV+D++ + S L +WL EI
Sbjct: 64 AGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEI 105
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 57.2 bits (132), Expect = 6e-09
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K V++GD GVGK++L L+ + P T VE YK+ + + +WD
Sbjct: 8 KYVIIGDGGVGKSNL--LLRFTDELFDPIHTTTLGVEFG---YKDLQIDKYKVRLRVWDT 62
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G R+ +Y+ G +LV+D+T RKS V+L++WL+++
Sbjct: 63 CGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDL 104
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++GDSGVGKT + + + S T+G +++ + +G + + +++WD
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEL-DGKKIK----LQIWDT 64
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 116
G R +Y+ GIILV+D+TN +S N++ W+ I +S+
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD 113
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++GDSGVGKT + + + S T+G +++ + +G + + +++WD
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEL-DGKKIK----LQIWDT 64
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 116
G R +Y+ GIILV+D+TN +S N++ W+ I +S+
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD 113
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++GDSGVGKT + + + S T+G +++ + +G + + +++WD
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEL-DGKKIK----LQIWDT 64
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 116
G R +Y+ GIILV+D+TN +S N++ W+ I +S+
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD 113
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
K K+V+LG+ VGK+SL NK T+ S + K E QA + +W
Sbjct: 12 KFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNV-EDCQAD----LHIW 66
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
D G + ++Y+ ++G++LV D+T+RKS ++ W+ EI
Sbjct: 67 DTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEI 110
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 55.6 bits (128), Expect = 2e-08
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
KV+V+GD GVGKTS+ HN + T+G +K+ E T +++WD+
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENT----VVHLQIWDI 68
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G + + V+Y+ H I+V D T ++ +W ++
Sbjct: 69 SGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDL 110
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 55.6 bits (128), Expect = 2e-08
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
KV+V+GD GVGKTS+ HN + T+G +K+ E T +++WD+
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENT----VVHLQIWDI 68
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G + + V+Y+ H I+V D T ++ +W ++
Sbjct: 69 SGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDL 110
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 54.0 bits (124), Expect = 6e-08
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K +++GD GVGK+ L H K + T+G ++ + G + + +++WD
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVS-GQKIK----LQIWDT 67
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 119
G R +Y+ G ++V+D+T R + +L WLA+ + + N +
Sbjct: 68 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAI 119
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 1 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
M I+ VKVVV+G+SG GKT+L N P T+G + K+ + +G +
Sbjct: 1 MDTIKTVKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIR--- 57
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 118
++LWD G R + + +LV DL++ +L +W I++++ S+ T
Sbjct: 58 -LQLWDTAGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLIRWKG-IIDKNKSDFT 113
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYK-EGTQAQNTFFVELW 65
+K++++G+SGVGK+SL ++ + P V+ ++ +G + + + +W
Sbjct: 12 LKILIIGESGVGKSSL--MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVK----LAIW 65
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
D G R +Y+ G+I V+D+T+R S L W+ E+
Sbjct: 66 DTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEV 109
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 50.8 bits (116), Expect = 6e-07
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K+V++G+ GVGK++L N+ L T+G K+ EG + V++WD
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISV-EGKAVK----VQIWDT 64
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWL 106
G R +Y+ G +LV+D++ K+ ++++WL
Sbjct: 65 AGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWL 103
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 50.8 bits (116), Expect = 6e-07
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWD 66
+KV++LGDSGVGKTSL + + + T+G + + T +++WD
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTR-----DVNIDDRTVTLQIWD 64
Query: 67 VGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDS 114
G ++ FY+ +L D+TN S +L W E L Q S
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQAS 112
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 50.4 bits (115), Expect = 7e-07
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++G+S VGKTS + + TVG +VK ++ + + +++WD
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKT-VFRGDKRVK----LQIWDT 78
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G +R +Y+ G IL++D+TN +S ++Q W +I
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 50.4 bits (115), Expect = 7e-07
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++G+S VGKTS + + TVG +VK ++ + + +++WD
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKT-VFRGDKRVK----LQIWDT 78
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G +R +Y+ G IL++D+TN +S ++Q W +I
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 50.4 bits (115), Expect = 7e-07
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++G+S VGKTS + + TVG +VK ++ + + +++WD
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKT-VFRGDKRVK----LQIWDT 78
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G +R +Y+ G IL++D+TN +S ++Q W +I
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 50.4 bits (115), Expect = 7e-07
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++G+S VGKTS + + TVG +VK ++ + + +++WD
Sbjct: 38 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKT-VFRGDKRVK----LQIWDT 92
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G +R +Y+ G IL++D+TN +S ++Q W +I
Sbjct: 93 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 134
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 50.4 bits (115), Expect = 7e-07
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++G+S VGKTS + + TVG +VK ++ + + +++WD
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKT-VFRGDKRVK----LQIWDT 78
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G +R +Y+ G IL++D+TN +S ++Q W +I
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNK-PILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
+KV++LGDS GKT L LI + L+ + ++ ++ K T +++W
Sbjct: 3 LKVMLLGDSCTGKTCL--LIRYKDGAFLNNNFISTVGID---YRNKLITMGDKKVKLQIW 57
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
D G R+ +Y+ ++LV+D+ NR S N + WL++I
Sbjct: 58 DTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQI 101
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNK-PILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
+KV++LGDS GKT L LI + L+ + ++ ++ K T +++W
Sbjct: 3 LKVMLLGDSCTGKTCL--LIRYKDGAFLNNNFISTVGID---YRNKLITMGDKKVKLQIW 57
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
D G R+ +Y+ ++LV+D+ NR S N + WL++I
Sbjct: 58 DTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQI 101
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K +++GD+GVGK+ L + T+G ++ +G Q + +++WD
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DGKQIK----LQIWDT 62
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 116
G R+ +Y+ G +LV+D+T R + +L WL + +SN
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSN 111
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 49.2 bits (112), Expect = 2e-06
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWD 66
+K+VV+GD GKTS+ A S T+G + Q V++WD
Sbjct: 36 IKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQV----LVQVWD 91
Query: 67 VGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI-LNQDSSNPTLQHVDVD 125
+GG + D + + + LV+D+TN KS N WL+ + N SS ++ V +
Sbjct: 92 IGGQSIAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMG 151
Query: 126 PEQFLGSTQVIERRYYSRVSPFSDKRRIPPYIMA 159
+ L +V+ + + +D +P Y+ A
Sbjct: 152 NKTDLEERRVVSVEAHKNFATSND--MMPTYVSA 183
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K+V+LG+S VGK+SL + T+G + + + T E+WD
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDAT-----IKFEIWDT 75
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 116
G + + ++Y+ I+V+D+TN++S + W+ E+ Q S N
Sbjct: 76 AGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPN 124
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 46.8 bits (106), Expect = 9e-06
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 3 AIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFV 62
A++K K+V LG+ VGKTS+ ++ + T+G K Y E T +
Sbjct: 8 ALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKT-MYLE----DRTIRL 62
Query: 63 ELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQ 112
+LWD G R+ + + + ++V+D+TN S KW+ ++ N+
Sbjct: 63 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNE 112
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 45.6 bits (103), Expect = 2e-05
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVE 63
+++ K+VVLG+ GVGK++LT + + + I T ++E K + A+N +E
Sbjct: 1 MKEYKIVVLGNGGVGKSALT--LQYVQGIFVH--TYDATIEDSYRKLSK-VDAENAR-LE 54
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVD 123
+ D G+ R+ +Y+ G +LV L + NL++ +I+ + +
Sbjct: 55 ILDTAGTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPM--IL 112
Query: 124 VDPEQFLGSTQVIERRYYSRVSPFSDKRRIPPYIMATSTPLSNN 167
V + L T+ ++ S F++K +IP + TS L+ N
Sbjct: 113 VGNKSDLAETRQVDE---SEAHNFAEKLKIPYF--ETSARLNQN 151
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 44.8 bits (101), Expect = 4e-05
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVE 63
++K K+V LG+ VGKTSL ++ + T+G K Y E T ++
Sbjct: 8 LKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKT-MYLE----DRTVRLQ 62
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 116
LWD G R+ + + + ++V+D+TN S KW+ ++ + S+
Sbjct: 63 LWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSD 115
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 44.4 bits (100), Expect = 5e-05
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 1 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPI--LSPGWTVGCSVEVKLHKYKEGTQAQN 58
M++ K V++GD GVGK++L L KP + P T+G +E + +
Sbjct: 1 MSSDHVFKYVIIGDRGVGKSNLL-LRFIGKPFDSIHPS-TLG--IEFGFRNLEIDRKKVK 56
Query: 59 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
+ +WD G R+ +Y+ G +LV+D+T+R+S +L+ WL ++
Sbjct: 57 ---LHVWDTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDL 104
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 40.3 bits (90), Expect = 8e-04
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
++V+ GD+ VGK+S + + T+G VK +N ++LWD
Sbjct: 463 RIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKT----VNVDGRNVA-LQLWDT 517
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G R+ +++ G ILV+D+ +S + ++ W+ I
Sbjct: 518 AGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETI 559
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 40.3 bits (90), Expect = 8e-04
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 58 NTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
N + +WD G R +Y+ G+I V+D+T+R S L W+ E+
Sbjct: 31 NRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEV 82
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFF-VELWD 66
KV+++G++ VGKT L+ + T+G + +N V+LWD
Sbjct: 102 KVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFR------ERSCVIENELLRVQLWD 155
Query: 67 VGGSNGHRNTRDV-FYQPTHGIILVHDLTNRKSQVNLQKWLAE 108
G +R + +Y+ + ++ V+D+T R+S +L W+ E
Sbjct: 156 TAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKE 198
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 6 KVKVVVLGDSGVGKTSLTH---LIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFV 62
K KVVVLGDSGVGKTS+ + AH +P+ + T+G S V + ++ +
Sbjct: 52 KAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNA---TIGASF-VSFDVGADYRDREDVVRL 107
Query: 63 ELWDVGG 69
++WD G
Sbjct: 108 QMWDTAG 114
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
+V+++++G GKT++ + + + I++ T+G +VE +K N F +W
Sbjct: 17 QVRILMVGLDAAGKTTILYKLKLGE-IVTTIPTIGFNVETVEYK--------NISFT-VW 66
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
DVGG + R ++Q T G+I V D +++ ++ L ++LN+D
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNED 114
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
+V+++++G GKT++ + + + I++ T+G +VE +K N F +W
Sbjct: 17 QVRILMVGLDAAGKTTILYKLKLGE-IVTTIPTIGFNVETVEYK--------NISFT-VW 66
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
DVGG + R ++Q T G+I V D +++ ++ L ++LN+D
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNED 114
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 37.9 bits (84), Expect = 0.004
Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 8/139 (5%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVE 63
I K+V++GD G GKT T + H + VEV H T F
Sbjct: 7 IPTFKLVLVGDGGTGKT--TFVKRHLTGEFEKKYVATLGVEV--HPLVFHTNRGQIRF-N 61
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL---Q 120
+WD G RD +Y I++ D+T R + N+ W ++ + P +
Sbjct: 62 VWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCGN 121
Query: 121 HVDVDPEQFLGSTQVIERR 139
VDV + T R+
Sbjct: 122 KVDVKDRKVKAKTITFHRK 140
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 37.9 bits (84), Expect = 0.004
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 1 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
MAAI K K+V++GD GKT L LI +K + +G Q +
Sbjct: 1 MAAIRK-KLVIVGDGACGKTCL--LIVFSKDQFPDVYVPTVFENYVADIEVDGKQVE--- 54
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNL-QKWLAEI 109
+ LWD G + R + Y T I++ + + S N+ +KW E+
Sbjct: 55 -LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV 103
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 37.9 bits (84), Expect = 0.004
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 1 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
MAAI K K+V++GD GKT L LI +K + +G Q +
Sbjct: 1 MAAIRK-KLVIVGDGACGKTCL--LIVFSKDQFPDVYVPTVFENYVADIEVDGKQVE--- 54
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNL-QKWLAEI 109
+ LWD G + R + Y T I++ + + S N+ +KW E+
Sbjct: 55 -LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV 103
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 36.7 bits (81), Expect = 0.010
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K+VV+GD GVGK++LT + N + T+ S K+ T +++ D
Sbjct: 5 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR------KQVVIDGETCLLDILDT 58
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G + RD + + G +LV + KS N+ + +I
Sbjct: 59 AGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQI 100
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 36.7 bits (81), Expect = 0.010
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K+VV+GD GVGK++LT + N + T+ S K+ T +++ D
Sbjct: 8 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR------KQVVIDGETCLLDILDT 61
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 109
G + RD + + G +LV + KS N+ + +I
Sbjct: 62 AGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQI 103
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 36.3 bits (80), Expect = 0.013
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
++++++LG GKT+L ++P + T+G ++K +K+ F + LW
Sbjct: 16 EMRILILGLDNAGKTTLMKKFL-DEPTDTIEPTLG--FDIKTVHFKD-------FQLNLW 65
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
DVGG R+ +++ T +I V D ++R+ + + L ++L ++
Sbjct: 66 DVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEE 113
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 36.3 bits (80), Expect = 0.013
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
++++++LG G GKT++ + + + + + T+G +VE +K N F ++W
Sbjct: 16 EMRILILGLDGAGKTTILYRLQVGEVVTTIP-TIGFNVEQVEYK--------NLKF-QVW 65
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
D+GG R +Y T II V D +R ++ LA +L +D
Sbjct: 66 DLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQED 113
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 36.3 bits (80), Expect = 0.013
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
+++++++G GKT++ + + + I++ T+G +VE +K N F +W
Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGE-IVTTIPTIGFNVETVEYK--------NISFT-VW 66
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
DVGG + R ++Q T G+I V D +R+ ++ L +L +D
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAED 114
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 35.9 bits (79), Expect = 0.017
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQN-TFFVEL 64
K+K+VV+GD+ GKTSL L+A+ K +T + N + V L
Sbjct: 4 KLKLVVVGDTYTGKTSL--LVAYTKKQFLDNYTT-----TVFDNWAVSVHIDNKNYAVNL 56
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQK-WLAEILNQDSSN 116
+D G + R + Y + ++ + +RK+ + + W+ EI N
Sbjct: 57 FDTAGQGNYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDN 109
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 35.5 bits (78), Expect = 0.022
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQ-NTFFV 62
++ +K VV+GD VGKT L LI++ G + Y +
Sbjct: 1 MQAIKCVVVGDGAVGKTCL--LISYTTNAFP-----GEYIPTVFDNYSANVMVDGRPINL 53
Query: 63 ELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQ-KWLAEILNQDSSNPTL 119
LWD G + R + Y T ++ L N S N++ KW E+ + + P +
Sbjct: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPII 111
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 35.5 bits (78), Expect = 0.022
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQ-NTFFV 62
++ +K VV+GD VGKT L LI++ G + Y +
Sbjct: 1 MQAIKCVVVGDGAVGKTCL--LISYTTNAFP-----GEYIPTVFDNYSANVMVDGRPINL 53
Query: 63 ELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQ-KWLAEILNQDSSNPTL 119
LWD G + R + Y T ++ L N S N++ KW E+ + + P +
Sbjct: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPII 111
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 35.5 bits (78), Expect = 0.022
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQ-NTFFV 62
++ +K VV+GD VGKT L LI++ G + Y +
Sbjct: 1 MQAIKCVVVGDGAVGKTCL--LISYTTNAFP-----GEYIPTVFDNYSANVMVDGRPINL 53
Query: 63 ELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQ-KWLAEILNQDSSNPTL 119
LWD G + R + Y T ++ L N S N++ KW E+ + + P +
Sbjct: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPII 111
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 35.5 bits (78), Expect = 0.022
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQ-NTFFV 62
++ +K VV+GD VGKT L LI++ G + Y +
Sbjct: 1 MQAIKCVVVGDGAVGKTCL--LISYTTNAFP-----GEYIPTVFDNYSANVMVDGRPINL 53
Query: 63 ELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQ-KWLAEILNQDSSNPTL 119
LWD G + R + Y T ++ L N S N++ KW E+ + + P +
Sbjct: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPII 111
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 35.5 bits (78), Expect = 0.022
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQ-NTFFV 62
++ +K VV+GD VGKT L LI++ G + Y +
Sbjct: 1 MQAIKCVVVGDGAVGKTCL--LISYTTNAFP-----GEYIPTVFDNYSANVMVDGRPINL 53
Query: 63 ELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQ-KWLAEILNQDSSNPTL 119
LWD G + R + Y T ++ L N S N++ KW E+ + + P +
Sbjct: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPII 111
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 35.1 bits (77), Expect = 0.029
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVE 63
+ + K+VVLG GVGK++LT + T+ S ++ +G Q +E
Sbjct: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVE--VDGQQC----MLE 54
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILN-QDSSNPTL--- 119
+ D G+ RD++ + G +LV+ +T + + +L +IL +D+ +
Sbjct: 55 ILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILV 114
Query: 120 -QHVDVDPEQFLGSTQ 134
D++ E+ +G Q
Sbjct: 115 GNKCDLEDERVVGKDQ 130
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 35.1 bits (77), Expect = 0.029
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
+K K++V+G GKT++ + K + T+G +VE ++ N FV +
Sbjct: 16 KKYKIIVVGLDNAGKTTILYNYV-TKDQVETKPTIGSNVEEVSYR--------NLDFV-I 65
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHD 92
WD+GG R + +Y T +I+V D
Sbjct: 66 WDIGGQESLRKSWSTYYVQTDVVIVVID 93
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 35.1 bits (77), Expect = 0.029
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 59 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 118
TF + ++DVGG G R +Y HGII V D + ++ E L+ +SNP
Sbjct: 68 TFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFTE----SIEALHSLTSNPH 123
Query: 119 LQ 120
+Q
Sbjct: 124 VQ 125
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 35.1 bits (77), Expect = 0.029
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 59 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 118
TF + ++DVGG G R +Y HGII V D + ++ E L+ +SNP
Sbjct: 68 TFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFTE----SIEALHSLTSNPH 123
Query: 119 LQ 120
+Q
Sbjct: 124 VQ 125
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 35.1 bits (77), Expect = 0.029
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
KV+++G GVGK++LT +++ + T S K+ +G + +++ D
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKV--VLDGEECS----IDILDT 72
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEIL---NQDSSNP 117
G + RD +Y+ G I V + + +S ++ +IL N DSS P
Sbjct: 73 AGQEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVP 125
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.039
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
+++++++LG GKT++ + + + + + TVG +VE +K N F +
Sbjct: 12 KELRILMLGLDAAGKTTILYKLKLGQSVTTIP-TVGFNVETVTYK--------NIKF-NV 61
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILN 111
WDVGG + R +Y T +I V D +R + L I+N
Sbjct: 62 WDVGGQDKIRPLWRHYYTGTQALIFVMDAADRDRVDEARMELHRIIN 108
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 34.3 bits (75), Expect = 0.052
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 8 KVVVLGDSGVGKTSLT------HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFF 61
K+VV+GD GVGK+SLT + + P + + C ++ N
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEID------------GNWVI 66
Query: 62 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEIL 110
+++ D G R+ + + G +LV +T RKS K ++L
Sbjct: 67 MDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVL 115
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 34.3 bits (75), Expect = 0.052
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 8 KVVVLGDSGVGKTSLT------HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFF 61
K+VV+GD GVGK+SLT + + P + + C ++ N
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEID------------GNWVI 66
Query: 62 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEIL 110
+++ D G R+ + + G +LV +T RKS K ++L
Sbjct: 67 MDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVL 115
>Z81039-11|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 33.9 bits (74), Expect = 0.068
Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVE 63
+ + KVVVLG GVGK++LT +S + ++ KE +E
Sbjct: 1 MREFKVVVLGSGGVGKSALT------VQFVSSTFIEKYDPTIEDFYRKEIEVDGQPSVLE 54
Query: 64 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSS 115
+ D G+ + RD++ + G ++V+ +T++++ +++ +I+ S
Sbjct: 55 ILDTAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGS 106
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.068
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 8 KVVVLGDSGVGKTSLTHLI--AHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
+VV+LG G GKTS+ + +++P T+G ++E +H YK + + W
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIET-IH-YK-------NYRLNFW 421
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHD 92
DVGG R+ +Y I V D
Sbjct: 422 DVGGLPKLRHLWKHYYSNAQAIFYVID 448
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.090
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
++K VV+GD VGKT + LI++ + +G N + LW
Sbjct: 7 QIKCVVVGDGTVGKTCM--LISYTTDSFPVQYVPTVFDNYSAQMSLDG----NVVNLGLW 60
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNL-QKWLAEILNQDSSNPTL 119
D G + R + Y T IL + + S N+ KW+ EI P +
Sbjct: 61 DTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVI 115
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.090
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Query: 6 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 65
++K VV+GD VGKT + LI++ + +G N + LW
Sbjct: 7 QIKCVVVGDGTVGKTCM--LISYTTDSFPVQYVPTVFDNYSAQMSLDG----NVVNLGLW 60
Query: 66 DVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNL-QKWLAEILNQDSSNPTL 119
D G + R + Y T IL + + S N+ KW+ EI P +
Sbjct: 61 DTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVI 115
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 53 GTQAQNTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQ 112
GT+ ++LWDV G + + + G+ILV + K +LQ+W E + +
Sbjct: 106 GTRRLEDSEIQLWDVSGDKKYEDCWPAIKENAEGVILVVNPEEHKGS-DLQQWFYEFVEK 164
Query: 113 DS 114
++
Sbjct: 165 EN 166
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like
protein.
Length = 70
Score = 32.3 bits (70), Expect = 0.21
Identities = 13/16 (81%), Positives = 16/16 (100%)
Query: 7 VKVVVLGDSGVGKTSL 22
+KV++LGDSGVGKTSL
Sbjct: 10 LKVIILGDSGVGKTSL 25
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 7 VKVVVLGDSGVGKTSLT------HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
+++VV+G GVGK++LT + + P + +T C V+ L K
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCK----------- 66
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQK 104
+E+ D G R+ + + G ++V +T+R S ++K
Sbjct: 67 -LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKK 109
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 7 VKVVVLGDSGVGKTSLT------HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
+++VV+G GVGK++LT + + P + +T C V+ L K
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCK----------- 66
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQK 104
+E+ D G R+ + + G ++V +T+R S ++K
Sbjct: 67 -LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKK 109
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 7 VKVVVLGDSGVGKTSLT------HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
+++VV+G GVGK++LT + + P + +T C V+ L K
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCK----------- 66
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQK 104
+E+ D G R+ + + G ++V +T+R S ++K
Sbjct: 67 -LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKK 109
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 7 VKVVVLGDSGVGKTSLT------HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
+++VV+G GVGK++LT + + P + +T C V+ L K
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCK----------- 66
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQK 104
+E+ D G R+ + + G ++V +T+R S ++K
Sbjct: 67 -LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKK 109
>AF045637-2|AAN63433.1| 168|Caenorhabditis elegans R-ras related
protein 1, isoform b protein.
Length = 168
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 7 VKVVVLGDSGVGKTSLT------HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
+++VV+G GVGK++LT + + P + +T C V+ L K
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCK----------- 66
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQK 104
+E+ D G R+ + + G ++V +T+R S ++K
Sbjct: 67 -LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKK 109
>AF045637-1|AAK72295.1| 212|Caenorhabditis elegans R-ras related
protein 1, isoform a protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 7 VKVVVLGDSGVGKTSLT------HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 60
+++VV+G GVGK++LT + + P + +T C V+ L K
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCK----------- 66
Query: 61 FVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQK 104
+E+ D G R+ + + G ++V +T+R S ++K
Sbjct: 67 -LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKK 109
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 9 VVVLGDSGVGKT-SLTHLIAHNKPILSPGWTVGCSVEVKL 47
VV+ G+SG GKT S HL++H + G T GCS E L
Sbjct: 257 VVISGESGSGKTESTNHLMSHLISLSQKGST-GCSTEQTL 295
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 31.1 bits (67), Expect = 0.48
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 6 KVKVVVLGDSGVGKTS-LTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
++++++LG GKT+ L L + + ++P T G +V+ A + +
Sbjct: 17 EIRILLLGLDNAGKTTILKQLSSEDVQHVTP--TKGFNVKT--------VAAMGDIRLNV 66
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 113
WD+GG R +Y+ +I V D ++K + L E+L+++
Sbjct: 67 WDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEE 115
>U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin family
protein 16 protein.
Length = 361
Score = 31.1 bits (67), Expect = 0.48
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 88 ILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHV 122
IL +DL + S +++ W+ + +D NPT H+
Sbjct: 185 ILGYDLNSHVSSSDMEHWMKHSIKEDYGNPTAPHI 219
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 30.7 bits (66), Expect = 0.63
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 65 WDVGGSNGHRNTRDV-FYQPTHGIILVHDLTNRKSQVNLQKWLAE 108
WD G +R + +Y+ + ++ V+D+T R+S +L W+ E
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKE 45
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 30.3 bits (65), Expect = 0.84
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K+V++GD GVGKT + + + G T+G +K +G + + +++WD
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKT-LVVDGKRVK----LQIWDT 66
Query: 68 GG 69
G
Sbjct: 67 AG 68
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIA 27
+EK V+++G SGVGKT LT +A
Sbjct: 139 LEKSNVLLVGPSGVGKTFLTQTLA 162
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 4 IEKVKVVVLGDSGVGKTSLTHLIA 27
+EK V+++G SGVGKT LT +A
Sbjct: 255 LEKSNVLLVGPSGVGKTFLTQTLA 278
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K +++GD GVGK+ L H K + T+G ++ + G + + +++WD
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEV-SGQKIK----LQIWDT 67
Query: 68 GG 69
G
Sbjct: 68 AG 69
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 9 VVVLGDSGVGKTSLTHLIAHNKP 31
+++ GDSG+GKTSL +IA P
Sbjct: 410 LLITGDSGIGKTSLMRVIADMWP 432
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 9 VVVLGDSGVGKTSLTHLIAHNKP 31
+++ GDSG+GKTSL +IA P
Sbjct: 438 LLITGDSGIGKTSLMRVIADMWP 460
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 9 VVVLGDSGVGKTSLTHLIAHNKP 31
+++ GDSG+GKTSL +IA P
Sbjct: 410 LLITGDSGIGKTSLMRVIADMWP 432
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like
protein.
Length = 66
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHN 29
K++++GDSGVGK+SL A N
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADN 33
>Z99281-9|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 28.3 bits (60), Expect = 3.4
Identities = 22/108 (20%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
E++++ ++G GKT+ ++IA + TVG + + K +G ++L
Sbjct: 19 EEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFN----MRKITKGNVT-----IKL 69
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQ 112
WD+GG R+ + + + + I+ + D + + + L ++L++
Sbjct: 70 WDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDK 117
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like
protein.
Length = 74
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 7 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKE-----GTQAQNTFF 61
+K + GD GVGKTS H N TVG + K Y+ G + Q
Sbjct: 8 IKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQRV-L 66
Query: 62 VELWDVGG 69
+++WD G
Sbjct: 67 LQIWDTAG 74
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 28.3 bits (60), Expect = 3.4
Identities = 22/108 (20%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 5 EKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 64
E++++ ++G GKT+ ++IA + TVG + + K +G ++L
Sbjct: 19 EEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFN----MRKITKGNVT-----IKL 69
Query: 65 WDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQ 112
WD+GG R+ + + + + I+ + D + + + L ++L++
Sbjct: 70 WDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDK 117
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 67 VGGSNGHRNTRDVFYQPTHGII-LVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDV 124
V +N + T + + +G + V D RKS VN+ +W ++NQ + L V +
Sbjct: 96 VSAANFDKKTVEQYKNELNGQLQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSL 154
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like
protein.
Length = 69
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
K++++GDSGVGK+ L A + S T+G +++ + +G T +++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG----KTIKLQIWDT 67
Query: 68 GG 69
G
Sbjct: 68 AG 69
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like
protein.
Length = 65
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 3 AIEKVKVVVLGDSGVGKTSL 22
A++K K+V LG+ VGKTS+
Sbjct: 8 ALKKFKLVFLGEQSVGKTSI 27
>U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical
protein F54H5.5 protein.
Length = 662
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 108 EILNQDSSNPTLQHVDVDPEQFLGSTQVIERRYYSRVSPFSDKRR-IPPYIMATST 162
++ + S PTLQ + +F+GS I+ SR ++K + P +M T
Sbjct: 39 QLAHTSKSRPTLQRTSPEVARFIGSPMEIDNLGISRSDTIAEKSSFLDPTMMMDKT 94
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 7 VKVVVLGDSGVGKTSL 22
V++V++GD G GKTSL
Sbjct: 10 VRIVLIGDEGCGKTSL 25
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 27.1 bits (57), Expect = 7.8
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 8 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 67
+ ++LG G GKT++ + + N+ + + T+G +VE T + +WDV
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNETVNTIP-TIGFNVE---------TVTFQKITLTVWDV 68
Query: 68 GGSNGHRNTRDVFYQPTHGIILVHD 92
GG R ++ T ++ V D
Sbjct: 69 GGQKKIRALWKYYFPNTTTLVFVVD 93
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,749,298
Number of Sequences: 27539
Number of extensions: 193703
Number of successful extensions: 717
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 593
Number of HSP's gapped (non-prelim): 103
length of query: 181
length of database: 12,573,161
effective HSP length: 77
effective length of query: 104
effective length of database: 10,452,658
effective search space: 1087076432
effective search space used: 1087076432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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