GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000364-TA|BGIBMGA000364-PA|IPR005654|AFG1-like ATPase
         (342 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   1.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   5.6  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   7.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   7.4  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 17  LSSQTHAQHFVNDGPWQAYTQKVSSKAL 44
           L ++TH+Q     G W+ +T+ + +K L
Sbjct: 140 LRNKTHSQPMQGVGNWERHTKGIGAKLL 167


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 259 EELCDRVVIAADSEPKNLMKLDETEFGDADRALMDDLKI 297
           EE+   +    D EP    KL E +F   DR + + L++
Sbjct: 322 EEILKEMEAVLDEEPPTYAKLQELKF--MDRVIKESLRL 358


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 259 EELCDRVVIAADSEPKNLMKLDETEFGDADRALMDDLKI 297
           EE+   +    D EP    KL E +F   DR + + L++
Sbjct: 322 EEILKEMEAVLDEEPPTYAKLQELKF--MDRVIKESLRL 358


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/14 (50%), Positives = 13/14 (92%)

Query: 54  VQHLQKVYQEISNY 67
           +Q +++VYQ++SNY
Sbjct: 494 IQRMKQVYQQLSNY 507


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/25 (32%), Positives = 18/25 (72%)

Query: 51  ERVVQHLQKVYQEISNYERPIIQEQ 75
           E +V+HL+++ +E  + +RP+  +Q
Sbjct: 171 EDIVKHLERLREERCDPDRPLPLDQ 195


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/29 (24%), Positives = 14/29 (48%)

Query: 309 FTGEEEMFACDRCLSRIMEMQTDEYWEKW 337
           FT  E ++A +      +    D+YW ++
Sbjct: 319 FTNSEGLYAINEIYDNALLALLDDYWNEY 347


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/29 (24%), Positives = 14/29 (48%)

Query: 309 FTGEEEMFACDRCLSRIMEMQTDEYWEKW 337
           FT  E ++A +      +    D+YW ++
Sbjct: 319 FTNSEGLYAINEIYDNALLALLDDYWNEY 347


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.136    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,610
Number of Sequences: 317
Number of extensions: 3151
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 7
length of query: 342
length of database: 114,650
effective HSP length: 57
effective length of query: 285
effective length of database: 96,581
effective search space: 27525585
effective search space used: 27525585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)