GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000363-TA|BGIBMGA000363-PA|undefined
         (160 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100907-1|AAC72852.1|  407|Homo sapiens bone morphogenetic prot...    31   1.8  
AF028333-1|AAF21630.1|  379|Homo sapiens growth/differentiation ...    30   3.2  

>AF100907-1|AAC72852.1|  407|Homo sapiens bone morphogenetic protein
           11 protein.
          Length = 407

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 30/134 (22%), Positives = 47/134 (35%), Gaps = 6/134 (4%)

Query: 28  RPLG-ATSGPRXXXXXXXXXXXXXXXXXXXXSCVQEPTTTQIACASCRSSEKARENSLRV 86
           RP G A  GP                                 C  C   + +RE  L  
Sbjct: 19  RPRGEAAEGPAAAAAAAAAAAAAGVGGERSSRPAPSVAPEPDGCPVCVWRQHSRELRLES 78

Query: 87  IRENLLAKLGFTQAPNTTGRQLPHVPAYLMKRFERRKPRPGVQSDALAPSRTFVTHTEQD 146
           I+  +L+KL   +APN + R++           ++       Q DAL P        E+D
Sbjct: 79  IKSQILSKLRLKEAPNIS-REVVKQLLPKAPPLQQILDLHDFQGDALQPE----DFLEED 133

Query: 147 DFLARTDNVLIFAR 160
           ++ A T+ V+  A+
Sbjct: 134 EYHATTETVISMAQ 147


>AF028333-1|AAF21630.1|  379|Homo sapiens growth/differentiation
           factor-11 protein.
          Length = 379

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 70  CASCRSSEKARENSLRVIRENLLAKLGFTQAPNTTGRQLPHVPAYLMKRFERRKPRPGVQ 129
           C  C   + +RE  L  I+  +L+KL   +APN + R++           ++       Q
Sbjct: 34  CPVCVWRQHSRELRLESIKSQILSKLRLKEAPNIS-REVVKQLLPKAPPLQQILDLHDFQ 92

Query: 130 SDALAPSRTFVTHTEQDDFLARTDNVLIFAR 160
            DAL P        E+D++ A T+ V+  A+
Sbjct: 93  GDALQPE----DFLEEDEYHATTETVISMAQ 119


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.129    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,297,117
Number of Sequences: 224733
Number of extensions: 717023
Number of successful extensions: 1232
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1232
Number of HSP's gapped (non-prelim): 2
length of query: 160
length of database: 73,234,838
effective HSP length: 84
effective length of query: 76
effective length of database: 54,357,266
effective search space: 4131152216
effective search space used: 4131152216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)