Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000362-TA|BGIBMGA000362-PA|IPR012934|Zinc finger,
AD-type, IPR007087|Zinc finger, C2H2-type
(503 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 92 2e-19
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 73 1e-13
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 72 2e-13
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 53 1e-07
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 52 2e-07
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 50 1e-06
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 47 5e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 47 5e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 47 7e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 44 7e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 42 2e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 33 0.070
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 29 2.0
SPBC1604.13c |mrpl32||mitochondrial ribosomal protein subunit L3... 28 2.6
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 28 2.6
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 27 4.6
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 27 4.6
SPAPB24D3.01 ||SPAPB2C8.02|transcription factor |Schizosaccharom... 27 8.0
SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like protein|Schi... 27 8.0
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 91.9 bits (218), Expect = 2e-19
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 309 KKRFACP--QCPRTFAQKTNLQTHVKQHTGIKDHICEV--CGAGFYSQKSLVRHNLIHRG 364
KK F CP +C + +++ + L+ H++ H+ + +C+ C FY + L H H
Sbjct: 20 KKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTN 79
Query: 365 ERPFSCNL--CSKRFIARCDLNRHLRIHSGYKPFKCNT--CTMSFNAKHQLQNH-ERMHT 419
+PFSC+ C +F + L RH+ +H KP+ C C F+ QL++H HT
Sbjct: 80 VKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHT 139
Query: 420 GERPYTC--QVCNVAFSYKVNLNNHVFKAHGINLKFKSIH 457
PY C Q C + F+ K L NHV +AH + + H
Sbjct: 140 HLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPH 179
Score = 85.8 bits (203), Expect = 1e-17
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 299 LGNHMSTHQEKKRFACPQ--CPRTFAQKTNLQTHVKQHTGIKDHICEV--CGAGFYSQKS 354
L H+ TH ++ F C C + F +K++L+ H + HT +K C C A FY+Q+
Sbjct: 40 LEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQH 99
Query: 355 LVRHNLIHRGERPFSCNL--CSKRFIARCDLNRHL-RIHSGYKPFKC--NTCTMSFNAKH 409
L RH +HR +P++C C + F L H+ H+ P+ C C + F K
Sbjct: 100 LERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQ 159
Query: 410 QLQNH-ERMHTGERPYTCQ----VCNVAFSYKVNLNNHVFKAH 447
+LQNH R H Y+C V + F L NH+ +AH
Sbjct: 160 KLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAH 202
Score = 74.5 bits (175), Expect = 3e-14
Identities = 46/159 (28%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 343 EVCGAGFYSQKSLVRHNLIHRGERPFSCNL--CSKRFIARCDLNRHLRIHSGYKPFKCNT 400
E CG + L +H H ERPF C+ CSK F + L H R H+ KPF C+
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 401 --CTMSFNAKHQLQNHERMHTGERPYTC--QVCNVAFSYKVNLNNHVFKAHGINLKFKSI 456
C F + L+ H +H +PY C + C+ FS L +H+ H L +
Sbjct: 88 DGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCT 147
Query: 457 HTVTEDILRREMGLENEANLTIAHIIPQVGEVPAAAAHE 495
+ E + L+N N II + HE
Sbjct: 148 YQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHE 186
Score = 57.2 bits (132), Expect = 5e-09
Identities = 53/191 (27%), Positives = 72/191 (37%), Gaps = 18/191 (9%)
Query: 268 HREKPIRMVKTATPKQKEKLVCPVCGILTFTLGNHMST-HQEKKRFACP--QCPRTFAQK 324
H E+ I + + P C C L +H+S H + C C FA K
Sbjct: 99 HLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATK 158
Query: 325 TNLQTHVKQ-HTGIKDHIC--EVCGA--GFYSQKSLVRHNLIHRGERPFSCNLCSKRFIA 379
LQ HV + H I + C E C GF L H I P SC++C ++F
Sbjct: 159 QKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNH--IREAHVP-SCSICGRQFKT 215
Query: 380 RCDLNRHLRIHSGY----KPFKC--NTCTMSFNAKHQLQNH-ERMHTGERPYTCQVCNVA 432
L H+ +H K + C C SF L+ H +H G + C C
Sbjct: 216 AAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTK 275
Query: 433 FSYKVNLNNHV 443
F YK L H+
Sbjct: 276 FGYKHMLQRHL 286
Score = 41.5 bits (93), Expect = 3e-04
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Query: 313 ACPQCPRTFAQKTNLQTHVKQHTGI----KDHIC--EVCGAGFYSQKSLVRH-NLIHRGE 365
+C C R F +L+ HV H K + C E C F +L +H ++IH G
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 366 RPFSCNLCSKRFIARCDLNRHLR---IHSGYKPFKCNTCTMSFNAKHQLQNHER 416
F C+ C +F + L RHL +KP+ N C + + + H++
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPY-INECGIKHDGIEGVAIHDQ 317
Score = 35.5 bits (78), Expect = 0.017
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 389 IHSGYKPFKC--NTCTMSFNAKHQLQNHERMHTGERPYTCQV--CNVAFSYKVNLNNHVF 444
+ S K F C C ++ L+ H R H+ ERP+ C C+ AF K +L H
Sbjct: 16 LRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH-- 73
Query: 445 KAHGINLKFKSIH 457
K N+K S H
Sbjct: 74 KRCHTNVKPFSCH 86
Score = 32.7 bits (71), Expect = 0.12
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 20/152 (13%)
Query: 280 TPKQKEKLVCPVCGIL-TFT----LGNHMST-HQEKKRFACPQCPRTFAQKTNLQTHVKQ 333
T ++++ CP+ G +FT L H+S H+ F C C F K LQ H+++
Sbjct: 229 TLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLER 288
Query: 334 HTGIKDH--ICEVCGAGFYSQKSLVRHNLIHRGERPFSCNLCSKRFIARCDLNRHLRIHS 391
T K H CG + + H+ + E+ S NL S +A+ +N + H
Sbjct: 289 GTCKKAHKPYINECGIKHDGIEGVAIHD---QKEKELSSNLVSD--VAKKIIN-EVTGH- 341
Query: 392 GYK---PFKCN--TCTMSFNAKHQLQNHERMH 418
GYK + C+ C F + + H H
Sbjct: 342 GYKEAREYSCSFPECNYRFKRLYDMHRHLNSH 373
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 72.5 bits (170), Expect = 1e-13
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 373 CSKRFIARCDLNRHLRIHSGYKPFKCNTCTMSFNAKHQLQNHERMHTGERPYTCQVCNVA 432
C+KRF +L H+ H+ Y+PF+C+ C SF +H + HE++HTG + + C CN
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 433 FSYKVNLNNHVFKAHGIN 450
F+ LN H G N
Sbjct: 637 FARMDALNRHYKSEVGQN 654
Score = 59.7 bits (138), Expect = 9e-10
Identities = 26/77 (33%), Positives = 35/77 (45%)
Query: 345 CGAGFYSQKSLVRHNLIHRGERPFSCNLCSKRFIARCDLNRHLRIHSGYKPFKCNTCTMS 404
C F +L H H RPF C++C K F + D RH ++H+G K F C TC
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 405 FNAKHQLQNHERMHTGE 421
F L H + G+
Sbjct: 637 FARMDALNRHYKSEVGQ 653
Score = 59.3 bits (137), Expect = 1e-09
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 317 CPRTFAQKTNLQTHVKQHTGIKDHICEVCGAGFYSQKSLVRHNLIHRGERPFSCNLCSKR 376
C + F + NL++H+ HT + C +C F Q RH +H G + F+C C++R
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 377 FIARCDLNRHLRIHSG 392
F LNRH + G
Sbjct: 637 FARMDALNRHYKSEVG 652
Score = 52.0 bits (119), Expect = 2e-07
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 297 FTLGNHMSTHQEKKRFACPQCPRTFAQKTNLQTHVKQHTGIKDHICEVCGAGFYSQKSLV 356
+ L +HM+TH + F C C ++FA++ + + H + HTGIK C C F +L
Sbjct: 585 YNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALN 644
Query: 357 RH 358
RH
Sbjct: 645 RH 646
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 302 HMSTHQEKKRFACPQCPRTFAQKTNLQTHVKQHTG 336
H H K FAC C + FA+ L H K G
Sbjct: 618 HEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVG 652
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 71.7 bits (168), Expect = 2e-13
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 8/186 (4%)
Query: 206 DNGSNLSNFNTKTTSITCYPILKNGTRGSPIILKRPKDSTLLKVHSSYKPRTQS---TVD 262
D+G ++SN N T + + + S I+ K+P+ +K P+ +S ++
Sbjct: 336 DHGLDISNANINNTLTQQFAL--SAPYESCIVTKKPEPCITVKEEEQLAPKIESADLSIT 393
Query: 263 GPKAMHREKPIRMVKTATPKQKEKLVCPVCGILTFTLGNHMSTHQEKKRFACPQ--CPRT 320
H KP + + K +C I T+ + + ++ C C +
Sbjct: 394 PQVTEHDSKPPVRISYDHRCKTRKQSTRICRIPPETMASLYCGPEADGKYVCLYNGCNKR 453
Query: 321 FAQKTNLQTHVKQHTGIKDHICEVCGAGFYSQKSLVRHNLIHRGERPFSCNLCSKRFIAR 380
A+K N+++H++ H + + C++C AGF L RH IH RP+ C C KRF
Sbjct: 454 IARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRL 512
Query: 381 CDLNRH 386
LNRH
Sbjct: 513 DALNRH 518
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 371 NLCSKRFIARCDLNRHLRIHSGYKPFKCNTCTMSFNAKHQLQNHERMHTGERPYTCQVCN 430
N C+KR + ++ H++ H +P++C+ C F H L+ H R+H RPY C+ C
Sbjct: 448 NGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CL 506
Query: 431 VAFSYKVNLNNH 442
F+ LN H
Sbjct: 507 KRFNRLDALNRH 518
Score = 54.8 bits (126), Expect = 3e-08
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 345 CGAGFYSQKSLVRHNLIHRGERPFSCNLCSKRFIARCDLNRHLRIHSGYKPFKCNTCTMS 404
C + ++ H H +RP+ C+LC F+ DL RHLRIH +P+ C C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 405 FNAKHQLQNHER 416
FN L H++
Sbjct: 509 FNRLDALNRHKQ 520
Score = 37.1 bits (82), Expect = 0.006
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 399 NTCTMSFNAKHQLQNHERMHTGERPYTCQVCNVAFSYKVNLNNHV 443
N C K+ +++H + H +RPY C +C F +L H+
Sbjct: 448 NGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHL 492
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 323 QKTNLQTHVKQHTGIKDHICEVCGAGFYSQKSLVRH-NLIHRGERPFSCNLCSKRFIARC 381
Q +N +T V + G K +C C F + L RH +H E+PF C +C KRF R
Sbjct: 406 QPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRD 464
Query: 382 DLNRHLRIHSGYKP 395
+L +H R+H P
Sbjct: 465 NLRQHERLHVNASP 478
Score = 50.0 bits (114), Expect = 8e-07
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 364 GERPFSCNLCSKRFIARCDLNRHLR-IHSGYKPFKCNTCTMSFNAKHQLQNHERMHTGER 422
G + F C CSK+F L RH+R +H+ KPF C C F+ + L+ HER+H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS 477
Query: 423 P 423
P
Sbjct: 478 P 478
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 310 KRFACPQCPRTFAQKTNLQTHVKQ-HTGIKDHICEVCGAGFYSQKSLVRHNLIHRGERP 367
K F CP+C + F + +L+ H++ HT K +C +CG F + +L +H +H P
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 392 GYKPFKCNTCTMSFNAKHQLQNHER-MHTGERPYTCQVCNVAFSYKVNLNNH 442
G K F C C+ F L+ H R +HT E+P+ C +C FS + NL H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQH 469
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 51.6 bits (118), Expect = 2e-07
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 337 IKDHICEVCGAGFYSQKSLVRHNLIHRGERPFSCNL--CSKRFIARCDLNRHLRIH 390
+K + C C F+ Q+ VRH H GE+PF C+ C KRF R +L RH+R H
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 366 RPFSCNLCSKRFIARCDLNRHLRIHSGYKPFKCN--TCTMSFNAKHQLQNHERMH 418
+ + C C + F + RH+R H+G KPF+C+ +C F + +L H R H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 310 KRFACPQCPRTFAQKTNLQTHVKQHTGIKDHICEV--CGAGFYSQKSLVRHNLIH 362
K + CP C R F ++ + H++ HTG K C C F + L+RH H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 394 KPFKCNTCTMSFNAKHQLQNHERMHTGERPYTCQV--CNVAFSYKVNLNNHV 443
K ++C C F+ + H R HTGE+P+ C C F+ + L HV
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHV 53
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 366 RPFSCNLCSKRFIARCDLNRHLRIHSGYKPFKCN--TCTMSFNAKHQLQNHERMHT 419
RP+ C LC+K F RH+R H+G KP C C F+ +L H R+HT
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 46.4 bits (105), Expect = 9e-06
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 342 CEVCGAGFYSQKSLVRHNLIHRGERPFSCNL--CSKRFIARCDLNRHLRIHS 391
C +C FY + RH H GE+P C C+KRF +L RH RIH+
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 312 FACPQCPRTFAQKTNLQTHVKQHTGIKDHICEV--CGAGFYSQKSLVRHNLIH 362
+ CP C + F + + H++ HTG K H+C C F L RH IH
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 394 KPFKCNTCTMSFNAKHQLQNHERMHTGERPYTCQV--CNVAFSYKVNLNNH 442
+P+KC CT +F H R HTGE+P+ C C FS L H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Score = 33.9 bits (74), Expect = 0.053
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 271 KPIRMVKTATPKQKEKLVCPVCGILTFTLGN---HMSTHQEKKRFAC--PQCPRTFAQKT 325
KP R K P CP+C + L + H+ TH +K C P C + F++
Sbjct: 12 KPSRSTKN--PDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSD 69
Query: 326 NLQTHVKQHT 335
L H + HT
Sbjct: 70 ELTRHARIHT 79
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 47.2 bits (107), Expect = 5e-06
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 339 DHICEVCGAGFYSQKSLVRHNLIHRGERPFSCNLCSKRFIARCDLNRHLRIHSGYKPFKC 398
DH+ E +++ L +LI +R F C+ C+KRF +L RH HS +P C
Sbjct: 3 DHVSENSTNVLSAKRKLTEPSLID-SKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPC 61
Query: 399 NTCTMSFNAKHQLQNH-ERMH 418
C + K L+ H +R H
Sbjct: 62 PYCEIKCKRKDLLKRHIQRFH 82
Score = 35.9 bits (79), Expect = 0.013
Identities = 14/52 (26%), Positives = 20/52 (38%)
Query: 396 FKCNTCTMSFNAKHQLQNHERMHTGERPYTCQVCNVAFSYKVNLNNHVFKAH 447
F C+ C F L H+ H+ P C C + K L H+ + H
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 30.3 bits (65), Expect = 0.65
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 309 KKRFACPQCPRTFAQKTNLQTHVKQHTGIKDHICEVCGAGFYSQKSLVRH 358
K+ F C QC + F + NL H H+ + C C + L RH
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 47.2 bits (107), Expect = 5e-06
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 342 CEVCGAGFYSQKSLVRHNLIHRGERPFSCNL--CSKRFIARCDLNRHLRIH 390
C C GF SL H H GERPF C+ C K F R ++ RH RIH
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 396 FKCNTCTMSFNAKHQLQNHERMHTGERPYTCQV--CNVAFSYKVNLNNHVFKAHGI 449
++C C F+ L+ H HTGERP+ C C AF+ + N+ H + HG+
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQ-RIHGL 522
Score = 44.0 bits (99), Expect = 5e-05
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 300 GNHMSTHQEKKRFACPQCPRTFAQKTNLQTHVKQHTGIKDHICEV--CGAGFYSQKSLVR 357
G+ ++ R+ C +C + F++ ++L+ H HTG + +C+ CG F + ++ R
Sbjct: 456 GSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRR 515
Query: 358 HNLIH 362
H IH
Sbjct: 516 HQRIH 520
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 368 FSCNLCSKRFIARCDLNRHLRIHSGYKPFKCN--TCTMSFNAKHQLQNHERMH 418
+ C C + F L H H+G +PF C+ C +FN + ++ H+R+H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 46.8 bits (106), Expect = 7e-06
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 383 LNRHLRIHS-GYKPFKCN--TCTMSFNAKHQLQNHERMHTGERPYTCQVCNVAFSYKVNL 439
L + R H G F C C SF K L+ HER H + ++C CN AF+ L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 440 NNHVFKAH 447
N HV + H
Sbjct: 72 NRHVQQMH 79
Score = 44.0 bits (99), Expect = 5e-05
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 350 YSQKSLVRHNLIHR-GERPFSCNL--CSKRFIARCDLNRHLRIHSGYKPFKCNTCTMSFN 406
+++K L + + HR G+ F C C K F + L RH R H K F C+ C +F
Sbjct: 7 FTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFA 66
Query: 407 AKHQLQNH-ERMH 418
L H ++MH
Sbjct: 67 RSDVLNRHVQQMH 79
Score = 37.1 bits (82), Expect = 0.006
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 345 CGAGFYSQKSLVRHNLIHRGERPFSCNLCSKRFIARCD-LNRHLR 388
C F ++ L RH H + FSC+ C++ F AR D LNRH++
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAF-ARSDVLNRHVQ 76
Score = 35.5 bits (78), Expect = 0.017
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 289 CPVCGILTFTLGNHMSTHQEKKRFACPQCPRTFAQKTNLQTHVKQHTGIKDHICE 343
CP L H TH+ K F+C C R FA+ L HV+Q K ++ E
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLSE 87
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 43.6 bits (98), Expect = 7e-05
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 307 QEKKRFACPQCPRTFAQKTNLQTHVKQHTGIKDHIC-EV------CGAGFYSQKSLVRH- 358
Q+ K++ C C R FA+ +L+ H++ HT K C E+ CG F + L+RH
Sbjct: 65 QKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQ 124
Query: 359 NLIHRGERP 367
IHR +P
Sbjct: 125 QKIHRNPQP 133
Score = 41.1 bits (92), Expect = 3e-04
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 394 KPFKCNTCTMSFNAKHQLQNHERMHTGERPYTC 426
K + C TCT +F L+ H R HT E+P+TC
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 337 IKDHICEVCGAGFYSQKSLVRHNLIHRGERPFSCNL-------CSKRFIARCDLNRH-LR 388
+K ++CE C F + L RH H E+PF+C+ C ++F R L RH +
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
Query: 389 IHSGYKP 395
IH +P
Sbjct: 127 IHRNPQP 133
Score = 35.9 bits (79), Expect = 0.013
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 366 RPFSCNLCSKRFIARCDLNRHLRIHSGYKPFKCNT-------CTMSFNAKHQLQNH-ERM 417
+ + C C++ F L RH+R H+ KPF C+ C F+ + L H +++
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 418 HTGERP 423
H +P
Sbjct: 128 HRNPQP 133
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 396 FKCNT--CTMSFNAKHQLQNHERMHTGERPYTCQVCNVAFSYKVNLNNHVFKAH 447
+KC+ CT SF K + H R HT + + C C+ +F+ LN HV + H
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Score = 35.9 bits (79), Expect = 0.013
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 364 GERPFSCNL--CSKRFIARCDLNRHLRIHSGYKPFKCNTCTMSFNAKHQLQNH 414
G+ + C+ C+K F + RH R H+ K F C C+ SF L H
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 35.1 bits (77), Expect = 0.023
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 317 CPRTFAQKTNLQTHVKQHTGIKDHICEVCGAGFYSQKSLVRH 358
C ++F +K + + H + HT K IC C + F L RH
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 32.7 bits (71), Expect = 0.12
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 302 HMSTHQEKKRFACPQCPRTFAQKTNLQTHVKQ 333
H +H K F CP C +F + L HV Q
Sbjct: 37 HFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQ 68
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 345 CGAGFYSQKSLVRHNLIHRGERPFSCNLCSKRFIARCDLNRHL 387
C F ++ RH H + F C CS F LNRH+
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 33.5 bits (73), Expect = 0.070
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 301 NHMSTHQEKKRFACPQCPRTFAQKTN---LQTHVKQHTGIKDHICEV--CGAGFYSQKSL 355
+H+ + K CPR +T+ L H++ HTG K IC V C F +L
Sbjct: 64 DHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDAL 123
Query: 356 VRH-NLIHRGE 365
+H +H +
Sbjct: 124 AKHMRTVHEAD 134
Score = 32.3 bits (70), Expect = 0.16
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 379 ARCDLNRHLRIHSGYKPFKCNT--CTMSFNAKHQLQNHER 416
+R L HLR H+G KPF C+ C SF L H R
Sbjct: 89 SRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
Score = 31.9 bits (69), Expect = 0.21
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 398 CNTCTMSFNAKHQLQNHERMHTGERPYTCQV--CNVAFSYKVNLNNHVFKAH 447
C M ++ L H R HTGE+P+ C V C+ +F+ L H+ H
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
Score = 31.1 bits (67), Expect = 0.37
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 351 SQKSLVRHNLIHRGERPFSCNL--CSKRFIARCDLNRHLR 388
S+ +LV H H GE+PF C++ C + F L +H+R
Sbjct: 89 SRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 28.7 bits (61), Expect = 2.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 395 PFKCNTCTMSFNAKHQLQNHE 415
P C C +F +++QL+NHE
Sbjct: 269 PIMCMVCNKNFRSQNQLENHE 289
>SPBC1604.13c |mrpl32||mitochondrial ribosomal protein subunit
L32|Schizosaccharomyces pombe|chr 2|||Manual
Length = 103
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 265 KAMHREKPIRMVKTATPKQKEKLVCPVCGILTFTLGNHMSTH 306
K + +K R++ K K CP+CG +F L +H+ +H
Sbjct: 53 KTSYTKKRSRLLSGKALKDKTVNRCPICG--SFKLAHHLCSH 92
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Query: 433 FSYKVNLNNHVFKAHG-----INLKFKSIHTV 459
FS+ ++ N +FKAHG +NL KSIH +
Sbjct: 268 FSFPISTINQLFKAHGMSVEQLNLFLKSIHYI 299
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 27.5 bits (58), Expect = 4.6
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 242 KDSTLLKVHSSYKPRTQSTVDGPKAMHREKPIR-MVKTAT---PKQKEKLVCPVCGILTF 297
++ T+L + +SY + ++ + + M+K + K KL+ P CG
Sbjct: 602 EEHTILSIKASYNKKESHLINQAYETQEAQVYKGMLKCSVCNFSNWKSKLI-PNCGHAFC 660
Query: 298 TLGNHMSTHQEKKRFACPQCPRTFAQKTNLQTHV 331
+ N M E K CPQC F+ L H+
Sbjct: 661 S--NCMEPFYEHKTSTCPQCETPFSVSDILTIHL 692
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 335 TGIKDHI-CEVCGAGFYSQKSLVRHNLIHRGERPFSCNLCSKR 376
TG K H CE C FY L +H + ER + C+ + R
Sbjct: 239 TGFKGHPKCEFCNTHFYDDDELFKH-CREKHERCYICDQVAGR 280
>SPAPB24D3.01 ||SPAPB2C8.02|transcription factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 8.0
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 9 KVSCNDGLPERICLKCCTTLEKAYLLKTVAERSDRKLRK----LLAKSKGNVLTKKIAFD 64
K+ CN LP C C E+ + K + +K +L + ++ +
Sbjct: 18 KIRCNRELPS--CQNCIVYQEECHYSKRLKRSYSATKKKNGNPVLESAIPSLSPSPSIEN 75
Query: 65 SFTDIKSEIGTIS---VKSEPKWDLELSLDSENKMPVETVDGKDIVIANTVIRKVDSTMD 121
+ S+I ++S K E K DL LSL + P++ + KD IR +S ++
Sbjct: 76 GSAMLNSDITSLSNRIFKVEEKLDLILSLLKNSSEPLDRTERKDFPSLAMQIRDANSLVN 135
>SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 308
Score = 26.6 bits (56), Expect = 8.0
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 447 HGINLKFKSIHTVTEDILRREMGLENEANLTIAHIIPQVGEVPAAAAHETVNHTSE 502
H +N F+S D+ + G E+ N AH + E+P+A + + SE
Sbjct: 5 HSLN-PFESGSVTASDVAAAKSGAEDLVNTLTAHTVHPSTELPSATSFPSALPNSE 59
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.132 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,158,075
Number of Sequences: 5004
Number of extensions: 87824
Number of successful extensions: 330
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 248
Number of HSP's gapped (non-prelim): 68
length of query: 503
length of database: 2,362,478
effective HSP length: 76
effective length of query: 427
effective length of database: 1,982,174
effective search space: 846388298
effective search space used: 846388298
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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