Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000361-TA|BGIBMGA000361-PA|IPR009057|Homeodomain-like
(243 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15560.1 68416.m01972 expressed protein 34 0.076
At5g01200.1 68418.m00025 myb family transcription factor contain... 31 0.54
At5g47090.1 68418.m05806 expressed protein 30 1.2
At2g34770.1 68415.m04269 fatty acid hydroxylase (FAH1) identical... 30 1.2
At3g52430.1 68416.m05766 phytoalexin-deficient 4 protein (PAD4) ... 30 1.6
At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identic... 29 2.9
At4g16420.2 68417.m02485 transcriptional adaptor (ADA2b) identic... 29 2.9
At4g16420.1 68417.m02484 transcriptional adaptor (ADA2b) identic... 29 2.9
At3g10590.1 68416.m01273 myb family transcription factor contain... 28 5.0
At1g55800.1 68414.m06390 hypothetical protein 28 5.0
At5g25860.1 68418.m03068 F-box family protein contains F-box dom... 28 6.6
At5g03870.1 68418.m00360 glutaredoxin family protein contains Pf... 28 6.6
At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identic... 28 6.6
At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identic... 28 6.6
At5g46200.1 68418.m05684 expressed protein contains similarity t... 27 8.7
>At3g15560.1 68416.m01972 expressed protein
Length = 471
Score = 34.3 bits (75), Expect = 0.076
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 4 PESPPPDEVQKLEGWTKDEKLSLLYALKTCGSKNIDWIHQNISTKTPEEIIHAIDY-YKN 62
PE+ +E ++ G EK L+ L SK+ Q +K +E+I +D+ +
Sbjct: 275 PENEEDEESRRERGKGNVEKW--LHILLENNSKSDPHDLQTEKSKKIDEMIEKLDHKFPF 332
Query: 63 LALLEVKPLDKKIKT-----NTRPCKNPRIPLACWAKLLTDTLHYKSLQTETSTAIRMIA 117
L ++ + +D K++ NT + L AK + ++TE+S RM
Sbjct: 333 LEKVDEEEVDLKLQAKEANNNTSKVDEEEVDLQLQAKETNNNTSKVEIRTESSRRSRMSF 392
Query: 118 DLENIPPALNTDK 130
DL+N P DK
Sbjct: 393 DLKNTPEKSGRDK 405
>At5g01200.1 68418.m00025 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 267
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 6 SPPPD-EVQKLEGWTKDEKLSLLYALKTCGSKNIDWIHQN-ISTKTPEEII-HAIDYY 60
SP P+ E +K WT+DE L L LK G + I ++ ++T+TP ++ HA Y+
Sbjct: 135 SPMPEKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYF 192
>At5g47090.1 68418.m05806 expressed protein
Length = 310
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 152 DKYSGLILKKCILETALISKAFIRTSSLKNLCKTITVTQKEMNYYPMFVHNKELATVRHL 211
++Y +L +LE + + LKNL K I+ T +E+ + V N+ LA + L
Sbjct: 66 ERYGSELLVDELLEFDAMKHDYEVDWHLKNLRKKISPTSEEIKSRSVAVRNRRLAYLNKL 125
Query: 212 ASQRSY 217
S+ Y
Sbjct: 126 VSEGQY 131
>At2g34770.1 68415.m04269 fatty acid hydroxylase (FAH1) identical
to fatty acid hydroxylase Fah1p GB:AF021804 GI:2736147
from [Arabidopsis thaliana]
Length = 237
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 16 EGWTKDEKLSLLYALKTCGSKNIDWIHQNISTKTPEEIIHAIDYYKNLAL 65
+G+T D K L++ + G +W+HQ I+TK + D+++ L L
Sbjct: 4 QGFTVDLKKPLVFQVGHLGEDYEEWVHQPIATKEGPRFFQS-DFWEFLTL 52
>At3g52430.1 68416.m05766 phytoalexin-deficient 4 protein (PAD4)
identical to phytoalexin-deficient 4 protein
[Arabidopsis thaliana] GI:6457331; contains Pfam profile
PF01764: Lipase
Length = 541
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 140 IANAMDGKPIPDDKYSGLILKKCI-LETALISKAFIRTSSLKNLCKTITVTQKEMNYY 196
+A A++ +D SG+++K+CI T ++ +R++ L N ++ + E+ +Y
Sbjct: 263 VALAVEALGFSNDDTSGVLVKECIETATRIVRAPILRSAELANELASVLPARLEIQWY 320
>At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 486
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 18 WTKDEKLSLLYALKTCGSKNIDWIHQNISTKTPEEIIHAIDYYKNLAL 65
W+ D+++ LL L+ G N + +++ TK+ E+ +++Y+N+ L
Sbjct: 105 WSADDEMLLLEGLEIYGLGNWAEVAEHVGTKSKEQ---CLEHYRNIYL 149
>At4g16420.2 68417.m02485 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 483
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 18 WTKDEKLSLLYALKTCGSKNIDWIHQNISTKTPEEIIHAIDYYKNLAL 65
W+ D+++ LL L+ G N + +++ TK+ E+ +++Y+N+ L
Sbjct: 105 WSADDEMLLLEGLEIYGLGNWAEVAEHVGTKSKEQ---CLEHYRNIYL 149
>At4g16420.1 68417.m02484 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 487
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 18 WTKDEKLSLLYALKTCGSKNIDWIHQNISTKTPEEIIHAIDYYKNLAL 65
W+ D+++ LL L+ G N + +++ TK+ E+ +++Y+N+ L
Sbjct: 105 WSADDEMLLLEGLEIYGLGNWAEVAEHVGTKSKEQ---CLEHYRNIYL 149
>At3g10590.1 68416.m01273 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 206
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 18 WTKDEKLSLLYALKTCGSKNIDWIHQN-ISTKTPEEIIHAIDYYK 61
WT++E L LK G N + TKTP ++ YYK
Sbjct: 113 WTEEEHRLFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQYYK 157
>At1g55800.1 68414.m06390 hypothetical protein
Length = 314
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 200 VHNKELATVRHLASQRSYNPLNIPEEFL 227
+HN EL + LA RS N L+ EEFL
Sbjct: 276 MHNGELQRMYKLAKNRSLNALSDSEEFL 303
>At5g25860.1 68418.m03068 F-box family protein contains F-box domain
Pfam:PF00646
Length = 448
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 22 EKLSLLYALKTCGSKNID-WIH 42
+KLS+L LK C K+ID W+H
Sbjct: 100 KKLSILCPLKCCAHKDIDQWLH 121
>At5g03870.1 68418.m00360 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 384
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 158 ILK-KCILETALISKAFIRTS-SLKNLCKTITVTQKEMNYYPMFVHNKELATVRHLASQR 215
ILK K ILET + +R S LK+ ++TVTQ+ +Y PMF + + R L+ ++
Sbjct: 143 ILKPKNILETP--KRGVMRLSFPLKSEESSVTVTQRRKSYSPMFDPDLVASYERELSQEK 200
>At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a)
identical to transcriptional adaptor ADA2a [Arabidopsis
thaliana] gi|13591698|gb|AAK31319
Length = 477
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 18 WTKDEKLSLLYALKTCGSKNIDWIHQNISTKTPEEII 54
W DE++ LL A+ T G N + ++ +KT E I
Sbjct: 40 WNADEEILLLEAIATYGFGNWKEVADHVGSKTTTECI 76
>At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 548
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 18 WTKDEKLSLLYALKTCGSKNIDWIHQNISTKTPEEII 54
W DE++ LL A+ T G N + ++ +KT E I
Sbjct: 111 WNADEEILLLEAIATYGFGNWKEVADHVGSKTTTECI 147
>At5g46200.1 68418.m05684 expressed protein contains similarity to
carboxyl-terminal proteinase contains Pfam profile
PF03080: Arabidopsis proteins of unknown function;
expression supported by MPSS
Length = 408
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 41 IHQNISTKTPEEIIHAIDYYKNLALLEVKPLDKKIKTNTRPCKNPR---IPLACWAKLLT 97
IH+ T +IH ++ +L+ DKK K N R KN IP A ++
Sbjct: 89 IHKQ-KTNLTNSLIHPQQIHRAGRILKQSRRDKKKKKNNRRKKNKNKLMIPSALLSQKNK 147
Query: 98 DTLHYKSLQTETSTAIRMIADLEN 121
H L TET ++ EN
Sbjct: 148 IPHHQPKLFTETHLHYAIVRTFEN 171
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,140,008
Number of Sequences: 28952
Number of extensions: 247317
Number of successful extensions: 600
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 594
Number of HSP's gapped (non-prelim): 15
length of query: 243
length of database: 12,070,560
effective HSP length: 79
effective length of query: 164
effective length of database: 9,783,352
effective search space: 1604469728
effective search space used: 1604469728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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