Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000359-TA|BGIBMGA000359-PA|undefined
(807 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 47 1e-05
SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces ... 33 0.16
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 31 0.63
SPCC1739.07 |||substrate-specific nuclear cofactor for exosome a... 29 1.9
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 2.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 3.4
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 29 3.4
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 29 3.4
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 28 5.9
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 5.9
SPBC3B9.15c |scp1||sterol regulatory element binding protein Scp... 28 5.9
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 28 5.9
SPBC11G11.03 |||60S acidic ribosomal protein |Schizosaccharomyce... 28 5.9
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 27 7.8
>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1309
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 28 QEIADLKASLWALGNTATAPSGLQLLMSLSNGYLEDSVLVHVVRLVKYCPVYSIRATAFY 87
+ I LK++LWA+GN G+ L++ D++ + +V+ + + ++R TA++
Sbjct: 1092 EAIRQLKSALWAIGNIGKTDQGITFLIN------HDTIPL-IVKYAENSLIPTVRGTAYF 1144
Query: 88 VLGLIGCTYDGANLLTELGW 107
VLGLI T G +L L W
Sbjct: 1145 VLGLISRTSKGVEILESLHW 1164
Score = 33.9 bits (74), Expect = 0.090
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 699 ASVERSSNSPETEVLRQVHLMANPIHLKQTRSMLLSLKQKHSEVFRSPCVYSDVCALLSR 758
+S+ S + E EV+R V ++N + ++ L ++ K+++VF S + +L +
Sbjct: 1207 SSLLSSLTNSEREVIRLVSNLSNHVLTNESARQLTKIRSKNAKVFSSKRLVKACMTILGK 1266
Query: 759 DTYMLCARRFLQEMF 773
Y + ++F+ E+F
Sbjct: 1267 FHYRVQIQQFVFELF 1281
>SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 279
Score = 33.1 bits (72), Expect = 0.16
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 315 IANQRPKIPELQRRTSTSSFSGPEVTNSPPTQMDMTG--YATLKSLNRRPHLSESAASCS 372
IAN+ + +R+ T ++ PE+ NS +D+ YAT + L ++ S
Sbjct: 44 IANEYEALKVTERKEDTQDYNEPELHNSNDPTVDLYADTYATQAATESDSELEDALFSQL 103
Query: 373 SEIDDLSWLLSDTNLRSKPFSSLRDRTKSSKER 405
E DD ++ + K F+ R +++KE+
Sbjct: 104 DEFDDTAYREQRLEMLKKEFA----RVEAAKEK 132
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 633 NVTSTKDVPLSENVAKFKWQHSSNNCLACVRTRPPSSYELREAFFAALDKTSTSGGEPQS 692
N+T+T+ V ++ + + H L C R L +F+A+ + G P
Sbjct: 337 NLTATQSVDVAAQIINLQDDHGDTALLICARNGAKKCARLLLSFYASSSIPNNQGQYPTD 396
Query: 693 PIASITASVERSSNSP 708
++S S + +SP
Sbjct: 397 FLSSKDMSFPENDDSP 412
>SPCC1739.07 |||substrate-specific nuclear cofactor for exosome
activity |Schizosaccharomyces pombe|chr 3|||Manual
Length = 133
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 309 YGTKGTIANQRPKIPELQR-RTSTSSFSGPEVTNSPPTQMDMTGYATL-KSLNRRPHLSE 366
Y G A++RP + ELQR + S E +P T+ T A + S + RP +++
Sbjct: 63 YKLNGIDASERPVMQELQRVKNYISKIQQAEKNVNPKTEAVNTSNAAISSSSSNRPKVAK 122
Query: 367 SAAS 370
AA+
Sbjct: 123 DAAT 126
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 29.1 bits (62), Expect = 2.6
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 9/118 (7%)
Query: 652 QHSSNNCLACVRTRPPSSYELREAFFAALDKTSTSGGEPQ------SPIASITASVERSS 705
Q S + L +R + LR+ A T+ S P+ +P AS++ V +S
Sbjct: 617 QRSPSKMLTTLRNNSSTFPSLRKNAMIARKSTADSLSSPKRQSVPSTPKASLSPRVHKSM 676
Query: 706 NSPETEVLRQVHLMANPIHLKQTRSMLLSLKQKHSEVFRSPCVYSDVCALLSRDTYML 763
+E L AN T L+ K +E R+ +YS + RD Y L
Sbjct: 677 TYSPSEASP---LYANKSPKSSTMVPLMKYKSGLNEGMRTSSIYSSTSSPYIRDQYFL 731
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 141 DYRANAYDTETSEHSDHTDQSATESLQSDYKHATKVGSISEQANRD 186
D A + +T+ SD D+S L+SD TK +SE N D
Sbjct: 3932 DLEELANEEDTANQSD-LDESEARELESDMNGVTKDSVVSENENSD 3976
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 567 STITTKVSNVERKNIVSSVKNVGINTVTEAVPEENINQL 605
ST T+ ++N+E+ N+V+S + ++ T P +++QL
Sbjct: 133 STSTSDLNNIEKDNLVNSEYSSKYSSTTRIYPYHSLSQL 171
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 111 RHTRHDQFPVIPDEIYSMYENGSY 134
+H R+ P IP +Y+NGSY
Sbjct: 510 KHNRYIDLPYIPGSFIKVYKNGSY 533
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 458 DLLDIFPENDEIKEDDTDKNDSNRGRISSFLADTSVASVE 497
DL +F ND K D++D N+ SSF D S+ ++
Sbjct: 267 DLNTVFTTNDWEKNIIYDESDVNKTNQSSFFIDKSLVDID 306
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 5.9
Identities = 26/166 (15%), Positives = 64/166 (38%), Gaps = 1/166 (0%)
Query: 541 SGALKTSLASGVSNSTKLTKQDPGIESTITTKVSNVERKNIVSSVKNVGINTVTEAVPEE 600
+G L+T+++S +ST + S+ TT ++ + SS + ++ + +
Sbjct: 120 NGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSS 179
Query: 601 NINQLXXXXXXXXXXXXVPETGDSSDRTLTEDNVTSTKDVPLSENVAKFKWQHSSNNCLA 660
+ + + SS ++ + TS+ S + + ++ +
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSS 239
Query: 661 CVRTRPPSSYELREAFFAALDKTSTSGGEPQSPIASITASVERSSN 706
+ T S++ + +STS P S A++ + ++SN
Sbjct: 240 FITTMSSSTFISTVTVTPSSSSSSTSSEVPSS-TAALALNASKASN 284
>SPBC3B9.15c |scp1||sterol regulatory element binding protein
Scp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 128 MYENGSYYSVTSPDYRANAYDTETSEH 154
+Y G+ SV S DY +NAY ETS H
Sbjct: 88 LYLLGTNTSVFSEDYLSNAYRWETSFH 114
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 465 ENDEIKED---DTDKNDSNRGRISSFLADTSVASVEKYRTTPDLSKNSK 510
ENDEI ED D+N+ N+ ++ +A+T E T +++ K
Sbjct: 211 ENDEILEDSKESKDENEENKETSTTNVAETDAPEEETVDTVEEIADEEK 259
>SPBC11G11.03 |||60S acidic ribosomal protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 241
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 354 TLKSLNRRPHLSESA--ASCSSEID--DLSWLLSDTNLRSKPFSSLRDRTKSSKERMAKL 409
TL ++ H ++A + +D D W+ TN+R+ +RD K S+ M K
Sbjct: 11 TLAQTEKKGHEGKAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKGSRIFMGKT 70
Query: 410 SVL 412
V+
Sbjct: 71 KVM 73
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 732 LLSLKQKHSEVFRSPCVYSDVCALLSRDTYML 763
+L + K S FR V+S V A+L RD + L
Sbjct: 687 ILKFQSKESHKFRKKEVWSTVLAVLQRDVFTL 718
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,372,513
Number of Sequences: 5004
Number of extensions: 134407
Number of successful extensions: 561
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 547
Number of HSP's gapped (non-prelim): 17
length of query: 807
length of database: 2,362,478
effective HSP length: 79
effective length of query: 728
effective length of database: 1,967,162
effective search space: 1432093936
effective search space used: 1432093936
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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