Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000359-TA|BGIBMGA000359-PA|undefined
(807 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_08_0032 - 27807489-27807497,27807641-27807684,27808046-278081... 35 0.22
02_05_1312 + 35642687-35642923,35643712-35643831,35644468-356445... 33 0.90
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 33 0.90
12_01_0605 - 4983235-4983849,4985658-4986578 32 1.6
02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,278... 32 1.6
01_06_1530 - 38019997-38020011,38020705-38020867,38021126-380212... 32 2.1
09_03_0168 - 12983476-12983780,12984180-12984684 31 2.8
06_03_0671 + 23348958-23349101,23349475-23349834,23350003-233503... 31 2.8
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975... 31 2.8
02_05_0891 - 32554355-32555305 31 3.6
11_06_0695 - 26340161-26340804,26342057-26343429,26344074-263441... 31 4.8
09_04_0107 - 14640097-14640348,14640472-14640701,14640805-146412... 31 4.8
08_01_0340 - 3008124-3009176 30 6.4
10_08_1004 + 22170866-22171442,22172424-22173337,22173426-22173566 30 8.4
10_06_0101 + 10736987-10737100,10737263-10737301,10737397-107374... 30 8.4
06_03_1480 - 30432718-30432996,30433151-30434123,30434251-304345... 30 8.4
05_05_0048 + 21884078-21884951,21885586-21885899 30 8.4
>11_08_0032 -
27807489-27807497,27807641-27807684,27808046-27808168,
27810770-27810983,27811382-27811530,27811719-27812618,
27812964-27814659
Length = 1044
Score = 35.1 bits (77), Expect = 0.22
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 522 FFKLYSILKTIAFL--GADGISGALKTSLASGVSNSTK-LTKQDPGIESTITTKVSNVER 578
FF L S + + FL G + SG++ SL + +SN+ + D + +I +SN+
Sbjct: 441 FFALLSNCRELQFLDIGMNSFSGSISASLLANLSNNLQYFYANDNNLTGSIPATISNLSN 500
Query: 579 KNIVSSVKNVGINTVTEAV 597
N++ N T+ +++
Sbjct: 501 LNVIGLFDNQISGTIPDSI 519
>02_05_1312 +
35642687-35642923,35643712-35643831,35644468-35644534,
35644673-35644694,35645053-35645152,35645282-35645414,
35645483-35645517,35645708-35646409,35646789-35647121,
35647337-35647601,35647665-35647999,35648105-35648177,
35648271-35648356,35648479-35648598,35648674-35648741,
35648825-35648882
Length = 917
Score = 33.1 bits (72), Expect = 0.90
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 597 VPEENINQLXXXXXXXXXXXXVPETGDSSDRTLTEDNVTSTKDVPLSENVAKFKWQHSSN 656
V +ENI V + +++ E+NV D+P +E AK + +
Sbjct: 110 VDQENIKTHRHNANAVKGKMLVNDKVSKTEKKQREENVDRYPDLPENEFAAKCPYCRKNC 169
Query: 657 NCLACVRTR 665
NC AC+R R
Sbjct: 170 NCKACLRMR 178
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 33.1 bits (72), Expect = 0.90
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 142 YRANAYDTETSEHSDH-TDQSATESLQSDYKHATK-----VGSISEQANRDVVDGKLAIV 195
Y AY+ + E+ D ++ E + +Y + G+ E + V+G+ A+
Sbjct: 95 YEDEAYEDDDEEYYDDLAEEEVGEGFEEEYDGRAEPPKEVAGAQGEDGEKGDVEGEAAVE 154
Query: 196 DTRKEQDKRKSHTLPSQGCSSSHDRPMLSESR 227
+E+ +++ +P+ G HD ESR
Sbjct: 155 GDGEEKKEQEPFAVPTSGAFYMHDDRFQEESR 186
>12_01_0605 - 4983235-4983849,4985658-4986578
Length = 511
Score = 32.3 bits (70), Expect = 1.6
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 457 RDLLDIFPENDEIKEDDTDKNDSNRGRISSFLADTSVASVE 497
+DLLD+ + E +E D NRG I +FLAD A E
Sbjct: 275 KDLLDVMLDISEKQEQSDDSLTINRGVIRAFLADLLTAGSE 315
>02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,
2785402-2785486,2785517-2787578,2787732-2787753,
2788157-2788327,2791473-2791517,2792558-2793874,
2793962-2794012,2794090-2794188,2794352-2794504,
2794554-2794571
Length = 1789
Score = 32.3 bits (70), Expect = 1.6
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 132 GSYYSVTSPDYRANAYDTETSEHSDHTDQSATESLQSDYKHATKVGSISEQANRDVVDGK 191
GS + D ++ TET + DQ + + + ISE A +V
Sbjct: 1367 GSNKRIVVDDRSSDVLHTETEGLATEQDQLIAPN--AGVSDSASSSDISEHAVESLVRSA 1424
Query: 192 LAIVDTRKEQDKRKSHTLPSQG-CSSS-HDRPMLSESRTVDILRDCSN 237
TR+++DK + L G CSSS +RP +S D+ R C++
Sbjct: 1425 APSSRTRRQKDKELN--LGQSGVCSSSCTNRPTISRYAPADVKRPCNH 1470
>01_06_1530 -
38019997-38020011,38020705-38020867,38021126-38021211,
38021297-38022642,38022980-38023193
Length = 607
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 195 VDTRKEQDKRKSHTLPSQGCSSSHDRPMLSESRTVDILRDCSNYDRPG 242
VD+ +Q+ ++H LP C+ + +LSE ++ + CSN + G
Sbjct: 98 VDSVVQQENGENHALPGDSCAKPDENHVLSEETLLEKDQLCSNDEAQG 145
>09_03_0168 - 12983476-12983780,12984180-12984684
Length = 269
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 10/72 (13%)
Query: 135 YSVTSPDYRANAYDTETSEHSDHTDQSATESLQSDYKHATKVGSISEQANRDVVDGKLAI 194
Y+V +Y + D + + D ++ SL D I+E A D DGKL
Sbjct: 27 YNVDDSEYNTDGEDYSIDDEGEELDHASNNSLDED---------INEDAE-DEEDGKLGE 76
Query: 195 VDTRKEQDKRKS 206
VD R E+D S
Sbjct: 77 VDDRCEEDNEGS 88
>06_03_0671 +
23348958-23349101,23349475-23349834,23350003-23350302,
23350399-23350488,23353290-23353766
Length = 456
Score = 31.5 bits (68), Expect = 2.8
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 3/94 (3%)
Query: 141 DYRANAYDTETSEHSDHTDQSATESLQSDYKHATKVGSISEQANRDVVDGKLAIVDTRKE 200
D R D E ++ D TE Q + +H+ VGSI DG + T+++
Sbjct: 330 DERFLTEDAEAAKAGDGDGGGGTEEPQPELRHSKSVGSIGMMRRVAADDGDDSEKTTKQQ 389
Query: 201 QDKRKSHTLPSQGCSSSHDRPMLSESRTVDILRD 234
+ K+K Q D RT DI D
Sbjct: 390 RKKKKKKKKDGQ---KEDDNRSQQVFRTKDIAPD 420
>03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,
9759974-9760033,9760519-9760555,9761268-9761347,
9761413-9761516,9761613-9761673,9762962-9763019,
9763866-9763918,9764357-9765320,9766131-9766185,
9767223-9768786
Length = 1133
Score = 31.5 bits (68), Expect = 2.8
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 69 VVRLVKYCPVYSIRATAFYVLGLIGCTYDGANLLT-ELGWLCVRHTRHDQFPV 120
V+ LV P Y ++ + Y+ G +YD ANL T ++ WL VR + D++ V
Sbjct: 1009 VLALVDSDP-YGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRV 1060
>02_05_0891 - 32554355-32555305
Length = 316
Score = 31.1 bits (67), Expect = 3.6
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 167 QSDYKHATKVGSISEQA-NRDVVDGKLAIVDTRKEQDKRKSHTLPSQGCSSSHDRPMLSE 225
Q+D AT GS+ R + GK++ + R E +K LPS+G HDR +
Sbjct: 163 QTDALIATLAGSLDNTGYGRKELQGKVSTLKRRYESTAKKKGDLPSKG----HDRRLYDL 218
Query: 226 SRTV 229
S++V
Sbjct: 219 SKSV 222
>11_06_0695 -
26340161-26340804,26342057-26343429,26344074-26344173,
26345230-26345362,26346857-26347258
Length = 883
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 229 VDILRDCSNYDRPGVIRVPAAENRLLIGRM 258
+D+ S DR GV R+P E+RL+IG +
Sbjct: 841 IDVCDGLSVADRNGVRRIPVGEHRLIIGEL 870
>09_04_0107 -
14640097-14640348,14640472-14640701,14640805-14641215,
14641481-14643831,14643927-14644093
Length = 1136
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 362 PHLSESAASCSSEIDDLS-WLLSDTNLRSKPFSSLRDRTKSSKERMAKLSVLEY 414
P + E + + + ++DL W + LR P L KS +ERM K +L Y
Sbjct: 780 PTILEESETPKAPMEDLKPWRIDAKFLREDPMDELNKFFKSYRERMRKFDILCY 833
>08_01_0340 - 3008124-3009176
Length = 350
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/89 (17%), Positives = 37/89 (41%)
Query: 114 RHDQFPVIPDEIYSMYENGSYYSVTSPDYRANAYDTETSEHSDHTDQSATESLQSDYKHA 173
+ + P +P ++ + N + S + + + T S H + D++ ESL +
Sbjct: 248 QQESAPFLPARLWQGFSNMLHNPGNSREPSSTSQSTNGSLHKEDADENTRESLHKEDVDD 307
Query: 174 TKVGSISEQANRDVVDGKLAIVDTRKEQD 202
GS+ ++ + G DT ++ +
Sbjct: 308 NTAGSLLKEDGYESATGSFDKEDTEEDSN 336
>10_08_1004 + 22170866-22171442,22172424-22173337,22173426-22173566
Length = 543
Score = 29.9 bits (64), Expect = 8.4
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 360 RRPHLSESAASCSSEIDDLSWLLSDTNLRSKPFSSLRDRTKSSKERMAKLSVLE 413
R+ + +AA+ +E++ S L+ L SKP SSLR R S+ M KLS+++
Sbjct: 151 RKKEAAVAAAAAVAEMERGSKGLAALGLESKPISSLR-RDVSAGTDMEKLSLIQ 203
>10_06_0101 +
10736987-10737100,10737263-10737301,10737397-10737474,
10737539-10737685,10737781-10737888,10738115-10738449,
10738572-10739544,10739702-10739980
Length = 690
Score = 29.9 bits (64), Expect = 8.4
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 644 ENVAKFKWQHSSNNCLACVRTRPPSSYELREAFFAALDKTSTSGG 688
EN+ FKW +SS C R S L+E +F A D +S S G
Sbjct: 438 ENIDNFKWLNSS----YCSVLRQLESARLKEYYFKAHDPSSLSDG 478
>06_03_1480 -
30432718-30432996,30433151-30434123,30434251-30434585,
30434929-30435075,30435498-30435569
Length = 601
Score = 29.9 bits (64), Expect = 8.4
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 644 ENVAKFKWQHSSNNCLACVRTRPPSSYELREAFFAALDKTSTSGG 688
EN+ FKW +SS C R S L+E +F A D +S S G
Sbjct: 349 ENIDNFKWLNSS----YCSVLRQLESARLKEYYFKAHDPSSLSDG 389
>05_05_0048 + 21884078-21884951,21885586-21885899
Length = 395
Score = 29.9 bits (64), Expect = 8.4
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 662 VRTRPPSSYELREAFFAALDKTSTSGGEPQSPIASITASVERSSNSPETEVLRQVH 717
+ P SY F D T+TS E S AS A+ ++ P +RQ+H
Sbjct: 37 IPAHPEPSYSYGNWSFLHADATATSSSESSSASASSGAAHIVGASGPSASFVRQLH 92
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,948,533
Number of Sequences: 37544
Number of extensions: 797123
Number of successful extensions: 2451
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2443
Number of HSP's gapped (non-prelim): 17
length of query: 807
length of database: 14,793,348
effective HSP length: 88
effective length of query: 719
effective length of database: 11,489,476
effective search space: 8260933244
effective search space used: 8260933244
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)
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