Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000359-TA|BGIBMGA000359-PA|undefined
(807 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 41 0.003
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 41 0.003
Z69883-6|CAA93744.2| 461|Caenorhabditis elegans Hypothetical pr... 32 1.4
Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical pr... 32 1.9
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 31 2.4
AF125961-2|AAD14739.1| 343|Caenorhabditis elegans Serpentine re... 31 2.4
AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical ... 31 3.2
AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical ... 31 3.2
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 31 4.3
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 30 5.7
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 7.5
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 30 7.5
AF083226-1|AAD03684.1| 560|Caenorhabditis elegans nuclear recep... 30 7.5
AF036702-12|AAP31437.1| 559|Caenorhabditis elegans Nuclear horm... 30 7.5
AF036702-11|AAP31436.1| 560|Caenorhabditis elegans Nuclear horm... 30 7.5
Z81581-13|CAH10785.1| 628|Caenorhabditis elegans Hypothetical p... 29 9.9
Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical pr... 29 9.9
Z66524-9|CAA91422.3| 696|Caenorhabditis elegans Hypothetical pr... 29 9.9
Z66524-8|CAH10782.1| 753|Caenorhabditis elegans Hypothetical pr... 29 9.9
Z66523-11|CAA91417.3| 696|Caenorhabditis elegans Hypothetical p... 29 9.9
Z66523-10|CAH04723.1| 753|Caenorhabditis elegans Hypothetical p... 29 9.9
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical protein
F29C12.3 protein.
Length = 1631
Score = 41.1 bits (92), Expect = 0.003
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 708 PETEVLRQVHL-MANPIHLKQ-TRSMLLSLKQKHSEVFRSPCVYSDVCALLSRDTYMLCA 765
P+ +LR+ L + + +K+ L+ L+Q H +F PC+Y+DV LL + +
Sbjct: 1558 PDAPMLRKEVLGHVDMLEIKEYPAKRLIGLRQHHPWLFEWPCMYADVLELLDEYRFKPHS 1617
Query: 766 RRFLQEMFLD 775
R FLQ++F D
Sbjct: 1618 RAFLQQIFYD 1627
Score = 37.9 bits (84), Expect = 0.028
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 24 CNTEQEIADLKASLWALGNTATAPSGLQLLMSLSNGYLEDSVLVHVVRLVKYCPVYSIRA 83
C T + ++KASL A+ + + G ++L + D+V V V+++ + PV ++R
Sbjct: 1100 CKTGKCFEEIKASLLAVSSIGSTDGGFEILPA-------DAVPV-VIKIAEEHPVLTVRG 1151
Query: 84 TAFYVLGLIGCTYDGANLLTELGW 107
AF+ L +GA L GW
Sbjct: 1152 IAFWALCTFSQCIEGAKRLGSFGW 1175
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 41.1 bits (92), Expect = 0.003
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 708 PETEVLRQVHL-MANPIHLKQ-TRSMLLSLKQKHSEVFRSPCVYSDVCALLSRDTYMLCA 765
P+ +LR+ L + + +K+ L+ L+Q H +F PC+Y+DV LL + +
Sbjct: 1558 PDAPMLRKEVLGHVDMLEIKEYPAKRLIGLRQHHPWLFEWPCMYADVLELLDEYRFKPHS 1617
Query: 766 RRFLQEMFLD 775
R FLQ++F D
Sbjct: 1618 RAFLQQIFYD 1627
Score = 37.9 bits (84), Expect = 0.028
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 24 CNTEQEIADLKASLWALGNTATAPSGLQLLMSLSNGYLEDSVLVHVVRLVKYCPVYSIRA 83
C T + ++KASL A+ + + G ++L + D+V V V+++ + PV ++R
Sbjct: 1100 CKTGKCFEEIKASLLAVSSIGSTDGGFEILPA-------DAVPV-VIKIAEEHPVLTVRG 1151
Query: 84 TAFYVLGLIGCTYDGANLLTELGW 107
AF+ L +GA L GW
Sbjct: 1152 IAFWALCTFSQCIEGAKRLGSFGW 1175
>Z69883-6|CAA93744.2| 461|Caenorhabditis elegans Hypothetical
protein C27C12.2 protein.
Length = 461
Score = 32.3 bits (70), Expect = 1.4
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 316 ANQRPK--IPELQRRTSTSSF--SGPEVTNSPPTQMD--MTGYATLKSLNRRPHLSESAA 369
+N RP IP +QR +++S S + SP + D + A+ SL+ S+SA+
Sbjct: 260 SNSRPSTVIPRVQRTNTSASLTRSMDHSSMSPISAHDDPYSNSASYSSLSTHTSFSDSAS 319
Query: 370 SCSSE-----IDDLSWLLSDTNLRSKPFSSLRDRTKSSKERMAKLSVLEYDWRP 418
E +DD S+ SD + S FSS + K+ + K S + RP
Sbjct: 320 LAHFEPKTEPMDDYSYNFSDNDFNSFEFSSTSEELKNIGCQKMKSSKMPLQDRP 373
>Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical
protein C17E4.6 protein.
Length = 391
Score = 31.9 bits (69), Expect = 1.9
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 620 ETGDSSDRTLTEDNVTSTKDV-PLSENVAKFKWQHSSNNCLACVRTRPPSSYELREAFFA 678
ET ++SD D+ +S +D P+ NV + + ++ N +A + E + +
Sbjct: 65 ETSNASDEQEENDDTSSDEDAEPIVLNVTERARRATAGNKMAALLASADHEDEFYKTAYG 124
Query: 679 ALDKTSTSGGEPQSPIASITASVERSSNSPETE 711
++ + E +SP+ S V+ + PE E
Sbjct: 125 GFEENNEVDKEFKSPVHSDDDEVDSDFDKPEEE 157
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 31.5 bits (68), Expect = 2.4
Identities = 32/176 (18%), Positives = 65/176 (36%), Gaps = 5/176 (2%)
Query: 552 VSNSTKLTKQDPGIESTITTKVSNVERKNIVSSVKNVGINTVT-EAVPEENINQLXXXXX 610
V +T +T + TT + + + +S GI+T T +A P ++
Sbjct: 283 VGKTTTVTTAQNSTWAATTTASNTTTQPVVTTSTSTQGISTTTAQATPSSSVIPTTTQTT 342
Query: 611 XXXXXXXVPETGDSSDRTLTEDNVTSTKDVPLSENVAKFKWQHSSNNCLACVRTRPPSSY 670
+P T +S T + + ST S S T PS+
Sbjct: 343 QRPTSTGIPSTVSTSQGTSSTSPIPSTTQTSSSAPSTYTSNFTPSPTTTLLTSTIAPSTQ 402
Query: 671 EL----REAFFAALDKTSTSGGEPQSPIASITASVERSSNSPETEVLRQVHLMANP 722
+ + + + T+ + G P S + S ++++ ++ +P T + + L +P
Sbjct: 403 GVPTSSKSSSPNSTPTTTITPGAPSSTLGSSSSTIVSTTITPSTPKVSTLTLSQSP 458
>AF125961-2|AAD14739.1| 343|Caenorhabditis elegans Serpentine
receptor, class j protein15 protein.
Length = 343
Score = 31.5 bits (68), Expect = 2.4
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 499 YRTTPDLSKNSKGMYFFLIFRYIFFKL-YSILKTIAFLGADGISGALKTSLASG 551
Y + NS G Y FLIF + F + YS ++ +A +G G A L G
Sbjct: 27 YLIVTEQKSNSIGKYRFLIFFFAIFDMSYSTVELLAPVGIHGTGAAFVVCLTDG 80
>AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical
protein T09A12.2a protein.
Length = 125
Score = 31.1 bits (67), Expect = 3.2
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 468 EIKEDDTDKNDSNRGRISSFLA---DTSVASVEKYRTTPDLSKNSKGMYFFLIFRYIFFK 524
E+K DDTD+ND + G I F A D + S+EKYR L N + Y FK
Sbjct: 16 ELKCDDTDENDQH-GTIYQFQAKNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFK 74
>AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical
protein T09A12.2b protein.
Length = 188
Score = 31.1 bits (67), Expect = 3.2
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 468 EIKEDDTDKNDSNRGRISSFLA---DTSVASVEKYRTTPDLSKNSKGMYFFLIFRYIFFK 524
E+K DDTD+ND + G I F A D + S+EKYR L N + Y FK
Sbjct: 16 ELKCDDTDENDQH-GTIYQFQAKNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFK 74
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 30.7 bits (66), Expect = 4.3
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 150 ETSEHSDHTDQSATESLQSDYKH-ATKV--GSISEQANRDVVDGKLAIVDTRKEQDKRKS 206
+ S ++++ +SD++H AT + G+ E+ + ++ K++ S
Sbjct: 303 QNSSSDQYSEEDLIREAESDFEHDATGIQSGTSDEEEEEAATSNATSAAESAKKRSAHSS 362
Query: 207 HTLPSQ--GCSSSHDR-PMLSESR 227
H P+Q +S DR P LS+S+
Sbjct: 363 HRTPAQKTPSTSESDRLPSLSKSK 386
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 30.3 bits (65), Expect = 5.7
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 631 EDNVTSTKDVPLSENVAKFKWQHSSNNCLACVRTRPPSSYELREAFFAALDKT---STSG 687
E + +S P ENVAK + + ++ + R PS + + AA +T +T+G
Sbjct: 1643 ETHQSSITKAPSLENVAKIRQSPVPESHISTLTRRSPSVENIAKYQQAAQPETHRATTTG 1702
Query: 688 GEPQSPIASI--TASVERSSNSPETEVLRQV-HLMANPIHLKQTR 729
+P + IA + + ER + ET + ++ ++A P K T+
Sbjct: 1703 SQPVANIAQVHNPSQPERQVFTKETPKIDRIDDILATPHEEKVTK 1747
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.9 bits (64), Expect = 7.5
Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 9/159 (5%)
Query: 550 SGVSNSTKLTKQDPGIESTITTKVSNVERKNIVSSVK---NVGINTVTEAVPEENINQLX 606
S V +ST + PG +T+T+ + + + S + + GI+T +E + + Q
Sbjct: 877 SPVESSTTPSPGSPG--TTLTSTSPSPSQSTTIGSTQGSTSPGISTTSEEMTSQGSTQTP 934
Query: 607 XXXXXXXXXXXVPETGDSSDRTLTEDNVTSTKDVPLSENVAKFKWQHSSNNCLACVRTRP 666
SS T+T + T P+ SS + ++ T+
Sbjct: 935 GSTGSTVTQPSTVSDSTSSGSTVTVGS-TEGSSSPIPSTSQNTNPSTSSGSSMS---TQT 990
Query: 667 PSSYELREAFFAALDKTSTSGGEPQSPIASITASVERSS 705
P S + ++ ++S G P + + SI+ S SS
Sbjct: 991 PQSSQSTSPVESSTSGATSSSGSPGTTLTSISPSPSPSS 1029
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 29.9 bits (64), Expect = 7.5
Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 6/137 (4%)
Query: 526 YSILKTIAFLGADGISGALKTSLASGVSNSTKLTKQDP-----GIESTITTKVSNVERKN 580
Y+IL+ A G A T + G S + + P S+ TT + ++
Sbjct: 142 YNILEAQLKCFAFGWGAATATEVIDGNSLNCNVLTDIPVTTTTSTTSSTTTTTATSTTES 201
Query: 581 IVSSVKNVGINTVTEAVPEENINQLXXXXXXXXXXXXVPETGDSSDRTLTEDNVTSTKDV 640
+S + + TE+ E T S+D T TE TST D
Sbjct: 202 TSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTST-DS 260
Query: 641 PLSENVAKFKWQHSSNN 657
+E+ + + +S +
Sbjct: 261 TTTESTTESTTESTSTS 277
>AF083226-1|AAD03684.1| 560|Caenorhabditis elegans nuclear receptor
NHR-8 protein.
Length = 560
Score = 29.9 bits (64), Expect = 7.5
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 329 TSTSSFSGPEVTNSPPTQMDMTGYATLKSLNRRP-HLSESAASCSSEIDDLS 379
+STS+ S V + P+ D +GY T + + + P + + S AS S I +LS
Sbjct: 209 SSTSTLSPMSVISCAPSSHDSSGYNTSQLVTQSPTNYTVSPASIPSSITELS 260
>AF036702-12|AAP31437.1| 559|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 8, isoform b protein.
Length = 559
Score = 29.9 bits (64), Expect = 7.5
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 329 TSTSSFSGPEVTNSPPTQMDMTGYATLKSLNRRP-HLSESAASCSSEIDDLS 379
+STS+ S V + P+ D +GY T + + + P + + S AS S I +LS
Sbjct: 208 SSTSTLSPMSVISCAPSSHDSSGYNTSQLVTQSPTNYTVSPASIPSSITELS 259
>AF036702-11|AAP31436.1| 560|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 8, isoform a protein.
Length = 560
Score = 29.9 bits (64), Expect = 7.5
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 329 TSTSSFSGPEVTNSPPTQMDMTGYATLKSLNRRP-HLSESAASCSSEIDDLS 379
+STS+ S V + P+ D +GY T + + + P + + S AS S I +LS
Sbjct: 209 SSTSTLSPMSVISCAPSSHDSSGYNTSQLVTQSPTNYTVSPASIPSSITELS 260
>Z81581-13|CAH10785.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 156 DHTDQSATESLQSDYKHATKVGSISEQANRDV-VDGKLAIVDTRKEQDKRKS 206
+HT + H +++GS+ D +DGKL++ T+ E RKS
Sbjct: 114 NHTPKKTVIHNSQSTNHISRIGSLRRMHAADASIDGKLSLSGTQGETASRKS 165
>Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 156 DHTDQSATESLQSDYKHATKVGSISEQANRDV-VDGKLAIVDTRKEQDKRKS 206
+HT + H +++GS+ D +DGKL++ T+ E RKS
Sbjct: 114 NHTPKKTVIHNSQSTNHISRIGSLRRMHAADASIDGKLSLSGTQGETASRKS 165
>Z66524-9|CAA91422.3| 696|Caenorhabditis elegans Hypothetical
protein T13H5.1a protein.
Length = 696
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 123 DEIYSMYENGSYYSVTSPDYRANAYDTETSEHSDHTDQSATESLQSDYKHATKVGS 178
DE +Y+ ++ +T+PDYR YD E SE +D S S + K + S
Sbjct: 618 DEYKYLYDVMLHWYMTNPDYR--IYDKEDSEDTDSQKTSRPPSNRHSIKEKSSFRS 671
>Z66524-8|CAH10782.1| 753|Caenorhabditis elegans Hypothetical
protein T13H5.1b protein.
Length = 753
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 123 DEIYSMYENGSYYSVTSPDYRANAYDTETSEHSDHTDQSATESLQSDYKHATKVGS 178
DE +Y+ ++ +T+PDYR YD E SE +D S S + K + S
Sbjct: 675 DEYKYLYDVMLHWYMTNPDYR--IYDKEDSEDTDSQKTSRPPSNRHSIKEKSSFRS 728
>Z66523-11|CAA91417.3| 696|Caenorhabditis elegans Hypothetical
protein T13H5.1a protein.
Length = 696
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 123 DEIYSMYENGSYYSVTSPDYRANAYDTETSEHSDHTDQSATESLQSDYKHATKVGS 178
DE +Y+ ++ +T+PDYR YD E SE +D S S + K + S
Sbjct: 618 DEYKYLYDVMLHWYMTNPDYR--IYDKEDSEDTDSQKTSRPPSNRHSIKEKSSFRS 671
>Z66523-10|CAH04723.1| 753|Caenorhabditis elegans Hypothetical
protein T13H5.1b protein.
Length = 753
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 123 DEIYSMYENGSYYSVTSPDYRANAYDTETSEHSDHTDQSATESLQSDYKHATKVGS 178
DE +Y+ ++ +T+PDYR YD E SE +D S S + K + S
Sbjct: 675 DEYKYLYDVMLHWYMTNPDYR--IYDKEDSEDTDSQKTSRPPSNRHSIKEKSSFRS 728
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,173,196
Number of Sequences: 27539
Number of extensions: 722376
Number of successful extensions: 2487
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2477
Number of HSP's gapped (non-prelim): 33
length of query: 807
length of database: 12,573,161
effective HSP length: 87
effective length of query: 720
effective length of database: 10,177,268
effective search space: 7327632960
effective search space used: 7327632960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
- SilkBase 1999-2023 -