Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000358-TA|BGIBMGA000358-PA|undefined
         (971 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    24   4.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   7.6  

>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 393 AATGPDITENHLALLLQCFLEVGLLDGLAEVI 424
           AAT P +     A   +C  EVG   GL  V+
Sbjct: 100 AATDPSVVSKFRAGFSECASEVGRFPGLDPVV 131


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 820 LNVLMRASRKSKELVRRKTKLKKNTEESNSIQKDEIENSGVD 861
           L VL+     S+ + RR+ +    T +S S+ KD+  +S V+
Sbjct: 18  LVVLLVHISSSERVTRRRLRRPLKTTQSVSVTKDQDVSSSVN 59


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.134    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,413
Number of Sequences: 317
Number of extensions: 8123
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 2
length of query: 971
length of database: 114,650
effective HSP length: 63
effective length of query: 908
effective length of database: 94,679
effective search space: 85968532
effective search space used: 85968532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)