Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000358-TA|BGIBMGA000358-PA|undefined
(971 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 39 0.004
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 34 0.083
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 33 0.19
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 31 0.77
SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces p... 31 0.77
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 30 1.3
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 29 2.4
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 28 5.4
SPBC582.09 |pex11||peroxisomal biogenesis factor 11|Schizosaccha... 28 5.4
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 28 5.4
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 28 7.2
SPCC320.10 |srp72||signal recognition particle subunit Srp72|Sch... 28 7.2
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 7.2
SPAC664.08c |||traub transciption factor family protein |Schizos... 28 7.2
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 7.2
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 27 9.5
SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase |Schizosacc... 27 9.5
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 38.7 bits (86), Expect = 0.004
Identities = 70/347 (20%), Positives = 138/347 (39%), Gaps = 26/347 (7%)
Query: 202 AVATLAEISVVNPELWVWCGGASAVSRQLAECATPRQAEALCG-ALLHVLDRPGPRRAAR 260
AV TL E+ ++ P++ G + L + + A AL+++LD P
Sbjct: 364 AVETLIELMIIRPKILFKANGLRVLMISLIDGSISENLAASAALALVYLLDDPESACYVN 423
Query: 261 LTTACLTHLAAPYCDFH----FRSAPTDSTRDEREMRFTCSRLALLCVLRSWPGLLHFCH 316
L + L +P+ F S+ S + + M+ + ++L L SW GLL
Sbjct: 424 LPYD-IGILLSPFTSSSSRDTFNSSEEQSEQAAKAMKSSAKVASVL--LNSWSGLLALS- 479
Query: 317 PSSAGGLRSLVAALYLPRL--EKAILDLLYELVGLPQPEWTDEISVA--LDAVDPSDFQD 372
+ LRS+V L +P ++DL + + + W++ L V +
Sbjct: 480 TNDFQALRSIVDTLRVPSFAPRSDVIDLFFLIFQVEYSSWSESFLAGKRLTVVKNQAVSN 539
Query: 373 TWRLNEGFVAAEGIAILPHLAATGPDITENHLALLLQCFLEVGLLDGLAEVI-VTSDTFI 431
+N + I + ++ A+LL FLE+GL++ + +I + D
Sbjct: 540 DDNINM-------VNIPDGSNKKYMSLRQHFTAVLLFIFLELGLVESIVCMIRASDDPSA 592
Query: 432 SVRATXXXXXXXXXXXXXXPPPICNITPALPVLMSQASNGKPQ-ALAAVAALRKLHAMLE 490
S +AT P + +LP L + AS + A + L+ + ++
Sbjct: 593 SRKATYLLGEVLRLSDELLPIHLGAKIQSLPSLFNMASQFTAEDRFVATSVLQSIESLNR 652
Query: 491 ARPASSSLFLDHIIQYCSGAFKEKNEDAA-KSRKEKDNANIRPRQEI 536
+ S++ Q S FKE+ D + + +++ ++ ++ +I
Sbjct: 653 VKFHSAT---QPFSQTTSLLFKEQKTDGSFRGQRQVEHVKLKMGMQI 696
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 779 SCYVKLIISSLDYTLDSYPRDILSKTLTCSIQAS 812
S Y LI S +D LDS+P ++ +TL C IQ++
Sbjct: 143 SRYCYLIASKIDDLLDSHPNEVFKETLICVIQSA 176
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 85 LVTLLCKEERSNLGFTPDELMACLRISLVDESMVIRAAALRVIRHL--LKTDYDVTIFNN 142
L L + R N + + L I++ DE+ +R +ALR+I L Y +
Sbjct: 545 LTVLNSLDSRFNKHLAQADKIRLLFIAINDENFAVRESALRIIGRLNVYNPAYVMPYLRK 604
Query: 143 MKLPYLVVRSMEVIIRNEEERAQ 165
+ L L + IIR +EE A+
Sbjct: 605 IMLKTLTILDYSTIIRTKEENAK 627
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 512 KEKNEDAAKSRKEKDNANIRPRQEIGIHKNDSIELLNESDNENET-KQRHSVGSRNDVTN 570
K++ +DA + ++ +N R R IH + + + + SD+ + T R S GS +
Sbjct: 1121 KQREKDAMLEKTDETTSNRRLRAHHKIHYGEDLNIYDNSDDTDYTVNDRSSPGSPFPIET 1180
Query: 571 RNISAL 576
IS++
Sbjct: 1181 ETISSI 1186
>SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 248
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 653 WATRIVNYLKPSSNKYSHMDLSSTCYGHS--ATRAGCQLIRH 692
W ++++++K KY H+ + C+GH A AG +I++
Sbjct: 86 WIKKLISFVKDVLFKYPHIKIVGLCFGHQIVAKAAGVPIIQN 127
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 496 SSLFLDHIIQYCSGAFKEKNEDAAKSRKEKDNANIRPRQEIGIHKNDSIELLNESDNENE 555
+ L+L +I + +GA++ ED +S EK+ E H +S + +++EN
Sbjct: 466 NQLYLSNIKPWNTGAYQRDREDIKQSDSEKERGPTSKLHEYVEHAPNSYASTHSTESENY 525
Query: 556 TKQ 558
+Q
Sbjct: 526 PQQ 528
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 501 DHIIQYCSGAFKEKNEDAAKSRKEKDNANIR-------PRQEIGIHKNDSIELLNESDNE 553
+H SG+ E E+ + + D+ ++ P E + + +I + NE++NE
Sbjct: 34 EHDTTQLSGSSSEPLENNSSLTRSTDDPSVEIRSKLVSPDNEANLLSDQNITISNENNNE 93
Query: 554 NETKQRHSVGSRNDVTN 570
N+T + S N+ +
Sbjct: 94 NDTTEEAETSSGNEAAD 110
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 323 LRSLVAALYLPRLEKAILDLLYELVGLPQPEWTDEISVALDAVDPSDFQDTWRLNEGFVA 382
L +V AL+ +++ D+L E +G P E EIS LD+V+ ++ ++ L +
Sbjct: 593 LEHIVPALF-KSIDQDESDILSERIGAPTAE---EISQLLDSVETNEEENDEELEKAMGV 648
Query: 383 AEGIAILPHLAA 394
IA+ +AA
Sbjct: 649 NSAIAMEKEIAA 660
>SPBC582.09 |pex11||peroxisomal biogenesis factor
11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 238
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 361 ALDAVDPSDFQDTWRLNEGFVAAEGI 386
ALDA P D ++N+GFVAA GI
Sbjct: 198 ALDATIPLAELDILKVNDGFVAAAGI 223
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 507 CSGAFKEKNEDAAKSRKEK-----DNANIRPRQEIGIHKNDSIELLNES----DNENETK 557
C + NED+A ++E DN+++ ++ IH N+S+ L++ ETK
Sbjct: 521 CRSSELNVNEDSANQKEESALGTSDNSDMYEKENTPIHHNESLNQLSKDLGSISLSEETK 580
Query: 558 QRHSVGSRNDVTNRNIS 574
Q + V ++ +S
Sbjct: 581 QEKPSKLKETVESKRLS 597
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 513 EKNEDAAKSRKEKDNANIRPRQEIGIHKNDSIELLNESDNENETKQRHSV 562
+K + K KEK + ++ + ++ I + +E+ E +NENE ++ ++
Sbjct: 31 KKRKPEKKDDKEKSSKKVQKKNKV-IESLNEMEVEMEDENENENDEQEAI 79
>SPCC320.10 |srp72||signal recognition particle subunit
Srp72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 561
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 601 NLFERDSDSLIRSTLVMQNKDGN 623
NLF+ DSD+++ + L+MQ+K N
Sbjct: 318 NLFKSDSDNIVVALLLMQHKISN 340
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 492 RPASSSLFLDHIIQYCSGAFKEKNEDAAKSRKEKDN-ANIRPRQEIGIHKNDSIELLNES 550
RP++ S H+ C GA E+ E + S N AN ++ + ND+ N +
Sbjct: 484 RPSADSGIRRHLEAMC-GATVERKEGGSNSSSNISNVANFDSAEDDNDNDNDNDRDSNNN 542
Query: 551 DNENET 556
+N N T
Sbjct: 543 NNNNNT 548
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 489 LEARPASSSLFLDHIIQYCSGAFKEKNEDAAKSRKEKDNANIRPRQEIGIHKNDSIELLN 548
+EAR S F+ H +Q + + SR ++ N +EI + N+ + LN
Sbjct: 206 VEARDGLVS-FIQHTLQLRKNLLIDSGVEILDSRSKRKE-NPVSLEEIALEMNNLDDSLN 263
Query: 549 ESDNENETKQRHSVGSRNDVTNRN 572
E N+ TK + V + ++ N
Sbjct: 264 EWKNDTLTKWHNRVQAVQGISQSN 287
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 492 RPASSSLFLDHIIQYCSGAFKEKNEDAAKSRKEKDN-ANIRPRQEIGIHKNDSIELLNES 550
RP++ S H+ C GA E+ E + S N AN ++ + ND+ N +
Sbjct: 484 RPSADSGIRRHLEAMC-GATVERKEGGSNSSSNISNVANFDSAEDDNDNDNDNDRDSNNN 542
Query: 551 DNENET 556
+N N T
Sbjct: 543 NNNNNT 548
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 770 LELSTKTHHSCYVKLIISSLDYTLDSYPRDILS-KTLTC 807
L+L+ H YV S YT+++YP ++LS T+TC
Sbjct: 585 LKLAAPLHDKFYVPH--SPPKYTMETYPNNVLSLSTVTC 621
>SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 252 RPGPRRAARLTTACLTHLAAPYCDFHFRSAP 282
RP R A L CL ++A Y D+ + + P
Sbjct: 114 RPSSPRLAELLKVCLDEMSASYIDYGYITTP 144
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.134 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,111,384
Number of Sequences: 5004
Number of extensions: 167719
Number of successful extensions: 509
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 491
Number of HSP's gapped (non-prelim): 29
length of query: 971
length of database: 2,362,478
effective HSP length: 80
effective length of query: 891
effective length of database: 1,962,158
effective search space: 1748282778
effective search space used: 1748282778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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