Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000358-TA|BGIBMGA000358-PA|undefined
(971 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 65 3e-10
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 65 3e-10
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 34 0.56
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 34 0.56
Z81048-1|CAB02839.1| 587|Caenorhabditis elegans Hypothetical pr... 33 0.74
AB033380-1|BAA92264.1| 587|Caenorhabditis elegans kinesin like ... 33 0.74
U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna synt... 33 0.98
AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA sy... 33 0.98
AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical ... 33 1.3
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 32 1.7
U61948-5|AAB03149.2| 509|Caenorhabditis elegans Hypothetical pr... 31 4.0
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 31 4.0
Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr... 30 6.9
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr... 30 6.9
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 30 9.1
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 64.9 bits (151), Expect = 3e-10
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 689 LIRHLLRHNDADCH--RLLEDLFLDVSNQIKAIETGVKAHECLFSPQHMCNTMCQMYFLF 746
LI+ LLR + H + +FL KA+ F+ +++ T ++F
Sbjct: 799 LIKLLLRVFQKEAHISDAYQPIFLKYVESFKALLEKRSNPNAYFAARNLSYTNSMLHFAI 858
Query: 747 IGQLCHSYAGLKLFKQTGLYENLLELSTKTHHSCYVKLIISSLDYTLDSYPRDILSKTLT 806
IG + GL + G+ +++ + T Y K+IISSLDYT + R I+ K LT
Sbjct: 859 IGTFTMTSKGLSILTNAGVLHMYVDILSSTSQLEYTKVIISSLDYTNEGMVRVIIGKALT 918
Query: 807 CSIQASRLYATQFLNVL 823
+ +ASR + T++L VL
Sbjct: 919 STSEASRKWTTRYLAVL 935
Score = 34.7 bits (76), Expect = 0.32
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 10/125 (8%)
Query: 196 DRLSRPAVATLAEISVVNPELWVWCGGASAVSRQLA--ECATPRQAEALCGALLHVLDRP 253
D+L+ P V E S+ P L + G + + L C + R L+ LD P
Sbjct: 218 DKLTLPCVGLFLEFSLTEPLLVLEMAGTDWLVKALTGVSCMSRRIVLLASHVLISWLDSP 277
Query: 254 GPRRAARLTTACLTHLAAPYCDFH-FRSAPTDSTRDEREMRFTCS------RLALLCVLR 306
R A L + + AP +F F+ + T D F + + + L ++R
Sbjct: 278 TIRIKAHLDLV-MEQIFAPLVEFGLFQKRGSMLTNDNANEAFHMNDFLENFKCSFLRIIR 336
Query: 307 SWPGL 311
SWPGL
Sbjct: 337 SWPGL 341
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 64.9 bits (151), Expect = 3e-10
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 689 LIRHLLRHNDADCH--RLLEDLFLDVSNQIKAIETGVKAHECLFSPQHMCNTMCQMYFLF 746
LI+ LLR + H + +FL KA+ F+ +++ T ++F
Sbjct: 799 LIKLLLRVFQKEAHISDAYQPIFLKYVESFKALLEKRSNPNAYFAARNLSYTNSMLHFAI 858
Query: 747 IGQLCHSYAGLKLFKQTGLYENLLELSTKTHHSCYVKLIISSLDYTLDSYPRDILSKTLT 806
IG + GL + G+ +++ + T Y K+IISSLDYT + R I+ K LT
Sbjct: 859 IGTFTMTSKGLSILTNAGVLHMYVDILSSTSQLEYTKVIISSLDYTNEGMVRVIIGKALT 918
Query: 807 CSIQASRLYATQFLNVL 823
+ +ASR + T++L VL
Sbjct: 919 STSEASRKWTTRYLAVL 935
Score = 34.7 bits (76), Expect = 0.32
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 10/125 (8%)
Query: 196 DRLSRPAVATLAEISVVNPELWVWCGGASAVSRQLA--ECATPRQAEALCGALLHVLDRP 253
D+L+ P V E S+ P L + G + + L C + R L+ LD P
Sbjct: 218 DKLTLPCVGLFLEFSLTEPLLVLEMAGTDWLVKALTGVSCMSRRIVLLASHVLISWLDSP 277
Query: 254 GPRRAARLTTACLTHLAAPYCDFH-FRSAPTDSTRDEREMRFTCS------RLALLCVLR 306
R A L + + AP +F F+ + T D F + + + L ++R
Sbjct: 278 TIRIKAHLDLV-MEQIFAPLVEFGLFQKRGSMLTNDNANEAFHMNDFLENFKCSFLRIIR 336
Query: 307 SWPGL 311
SWPGL
Sbjct: 337 SWPGL 341
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 33.9 bits (74), Expect = 0.56
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 14/117 (11%)
Query: 451 PPPICNITPALPVLMSQASNGKPQALAAV-----AALRKLHAMLEARPASSSLFLDHI-- 503
PPP + A L + +P A + A L + A LE+ A ++ F +H
Sbjct: 118 PPPSTQRSTATSSLKPSVTRARPVAQKPILPSKMALLEEKIAQLESAMAEATDFAEHQKS 177
Query: 504 -IQYCSGAFKEKN------EDAAKSRKEKDNANIRPRQEIGIHKNDSIELLNESDNE 553
IQ G + + +D + KE + A + ++ +H ND +LLNE + E
Sbjct: 178 KIQILDGKLEGADRKLISLQDQLSTLKEVNKAKVEECEDYRVHNNDLRDLLNEKEAE 234
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 33.9 bits (74), Expect = 0.56
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 14/117 (11%)
Query: 451 PPPICNITPALPVLMSQASNGKPQALAAV-----AALRKLHAMLEARPASSSLFLDHI-- 503
PPP + A L + +P A + A L + A LE+ A ++ F +H
Sbjct: 118 PPPSTQRSTATSSLKPSVTRARPVAQKPILPSKMALLEEKIAQLESAMAEATDFAEHQKS 177
Query: 504 -IQYCSGAFKEKN------EDAAKSRKEKDNANIRPRQEIGIHKNDSIELLNESDNE 553
IQ G + + +D + KE + A + ++ +H ND +LLNE + E
Sbjct: 178 KIQILDGKLEGADRKLISLQDQLSTLKEVNKAKVEECEDYRVHNNDLRDLLNEKEAE 234
>Z81048-1|CAB02839.1| 587|Caenorhabditis elegans Hypothetical
protein C41G7.2 protein.
Length = 587
Score = 33.5 bits (73), Expect = 0.74
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 472 KPQALAAVAALRKLHAMLEARPASSSLFLDHI---IQYCSGAFKEKN------EDAAKSR 522
KP + V L + +A LE A ++ F +H IQ+ G + + +D +
Sbjct: 144 KPILPSKVTLLEERNAQLEREMAEATDFAEHQKSKIQFLDGKLEGADRKLISLQDQLSTL 203
Query: 523 KEKDNANIRPRQEIGIHKNDSIELLNESDNE 553
KE + + +E +H ND +LLNE + E
Sbjct: 204 KEVHKSKMEECEEYRVHNNDLRDLLNEKEAE 234
>AB033380-1|BAA92264.1| 587|Caenorhabditis elegans kinesin like
protein protein.
Length = 587
Score = 33.5 bits (73), Expect = 0.74
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 472 KPQALAAVAALRKLHAMLEARPASSSLFLDHI---IQYCSGAFKEKN------EDAAKSR 522
KP + V L + +A LE A ++ F +H IQ+ G + + +D +
Sbjct: 144 KPILPSKVTLLEERNAQLEREMAEATDFAEHQKSKIQFLDGKLEGADRKLISLQDQLSTL 203
Query: 523 KEKDNANIRPRQEIGIHKNDSIELLNESDNE 553
KE + + +E +H ND +LLNE + E
Sbjct: 204 KEVHKSKMEECEEYRVHNNDLRDLLNEKEAE 234
>U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna
synthetase protein 1 protein.
Length = 441
Score = 33.1 bits (72), Expect = 0.98
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 304 VLRSWPGLLHFCHPSSAGGLRSLVAALYLPRLEKAILDLLYELV 347
++++W LLH P+ A G RS V L LEKA+LD +E V
Sbjct: 152 LVQTWRSLLH---PTDASGQRSYVFLGALASLEKALLDYAHERV 192
>AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA
synthetase protein.
Length = 441
Score = 33.1 bits (72), Expect = 0.98
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 304 VLRSWPGLLHFCHPSSAGGLRSLVAALYLPRLEKAILDLLYELV 347
++++W LLH P+ A G RS V L LEKA+LD +E V
Sbjct: 152 LVQTWRSLLH---PTDASGQRSYVFLGALASLEKALLDYAHERV 192
>AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical
protein C48E7.11 protein.
Length = 100
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 512 KEKNEDAAKSRKEKDNANI-RPRQEIGIHKNDSIELLNESDNENETKQR 559
+E +ED ++++++N + R RQ+ +ND+ E ++E ENET +R
Sbjct: 13 REDDEDDYSTKRKRNNEAVNRTRQKKRQEENDTAEKVDELKKENETLER 61
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 32.3 bits (70), Expect = 1.7
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 512 KEKNEDAAKSRKEKDNANIRPRQEIGIHKNDSIELLNESDNENETKQR 559
+EK++ +K +EKD +++ QE + D + E D + E K++
Sbjct: 94 EEKDDKKSKKTEEKDKLSVKKTQETKSERKDKKDERKEDDKKEENKEK 141
>U61948-5|AAB03149.2| 509|Caenorhabditis elegans Hypothetical
protein C46A5.2 protein.
Length = 509
Score = 31.1 bits (67), Expect = 4.0
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 664 SSNKYSHMDLSSTCYGHSATRAGCQLIRHLLRHNDADCHRLLEDLFLDVSNQI 716
+ N Y+ DL TCYG S T C + + C RL++ + + ++++
Sbjct: 231 NKNGYTCTDLFQTCYGGSQTYNCCDIFQPTYAMLRGRCFRLIDSYYQNDTDEV 283
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 512 KEKNEDAAKSRKEKDNANIRPRQEIGIHKNDSIELLNESDNENETKQR 559
+EK++ +K +EKD +++ QE + D + E + + E+K++
Sbjct: 88 EEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEK 135
>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical
protein F43G6.1b protein.
Length = 1069
Score = 30.3 bits (65), Expect = 6.9
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 456 NITPALPVLMSQASNGKPQALAAVAAL-RKLHAMLEARPASSSLFLDHIIQYCSGAFKEK 514
N+TPA+ ++ +A Q A V AL + M+E P S L ++ C A +K
Sbjct: 636 NLTPAIKKIIIKAKLNNEQRKAVVHALATEDFMMVEGLPGSGKTTLISVLIQCLVATNKK 695
Query: 515 NEDAAKSRKEKDNANIRPRQEIGIHK 540
AA + DN + +E+ K
Sbjct: 696 VLLAAFTHSAVDNILTKLTKEVAAEK 721
>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical
protein F43G6.1a protein.
Length = 1105
Score = 30.3 bits (65), Expect = 6.9
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 456 NITPALPVLMSQASNGKPQALAAVAAL-RKLHAMLEARPASSSLFLDHIIQYCSGAFKEK 514
N+TPA+ ++ +A Q A V AL + M+E P S L ++ C A +K
Sbjct: 672 NLTPAIKKIIIKAKLNNEQRKAVVHALATEDFMMVEGLPGSGKTTLISVLIQCLVATNKK 731
Query: 515 NEDAAKSRKEKDNANIRPRQEIGIHK 540
AA + DN + +E+ K
Sbjct: 732 VLLAAFTHSAVDNILTKLTKEVAAEK 757
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 29.9 bits (64), Expect = 9.1
Identities = 20/85 (23%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 823 LMRASRKSKELVRRKTKLKKNTEESNSIQKDEIENSGVDMETWFLQMLVGQMKDEFKGVV 882
L A+RKSKE++R K + N + + K E+E + +++ ++L +E+ ++
Sbjct: 721 LEEATRKSKEMLRTK---ELNAQRAIGRLKYEVETTTIEIGRLQTRLLQSVPTEEYDKLM 777
Query: 883 KVALSILEEAFSVPIYVEKLMPMRE 907
+ +++E V E++M +E
Sbjct: 778 RKYKRLIKETTGVETNNEEVMARQE 802
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.134 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,026,948
Number of Sequences: 27539
Number of extensions: 892393
Number of successful extensions: 2717
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2701
Number of HSP's gapped (non-prelim): 21
length of query: 971
length of database: 12,573,161
effective HSP length: 88
effective length of query: 883
effective length of database: 10,149,729
effective search space: 8962210707
effective search space used: 8962210707
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
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