GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000357-TA|BGIBMGA000357-PA|undefined
         (159 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.23 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.40 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   0.53 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   0.70 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   2.1  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   6.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    20   8.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short
          gastrulation protein.
          Length = 947

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 46 RNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVP 82
          RN   LLD+   TRTR +    V  K++ +LG   +P
Sbjct: 17 RNKAPLLDDG--TRTRNKAAECVFGKQVRELGSQWIP 51


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 24.6 bits (51), Expect = 0.40
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 101 PYICKESLYSITILKRRETKSQESL 125
           P+I  E++YS+T   R+E K  +SL
Sbjct: 217 PWIYNETIYSLTPQGRKEQKVLKSL 241


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 0.53
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 101 PYICKESLYSITILKRRETKSQESL 125
           P+I  E++YS+T   R+E K  +SL
Sbjct: 217 PWIHNETIYSLTPQGRKEQKVLKSL 241


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 0.70
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 38  IVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIE 86
           I  Y  +IRN +  L+ S+   T   G+I  E++ + +   N +  F E
Sbjct: 180 ICSYTVLIRNKISNLNTSLIHSTHLNGDIVKEHQNLHNKICNLIDEFNE 228


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 32  EELSALIVDYANMIRNDVILLDNSV 56
           E+ +AL+ +  N  R+D +LL  SV
Sbjct: 187 EQFTALVREIRNAFRHDGLLLTMSV 211


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
          protein 15 protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 58 TRTRKRGNIQVENKEIEDL 76
          T T K G ++ E K+ ED+
Sbjct: 63 TETMKNGCVKCEQKQKEDV 81


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 133 YRWVAESHPVSVACLCTRDYQLRY 156
           +R VAES  + + C+   +  LRY
Sbjct: 218 FRNVAESRKIFIECIEQYNVILRY 241


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.132    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,028
Number of Sequences: 317
Number of extensions: 1693
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 159
length of database: 114,650
effective HSP length: 52
effective length of query: 107
effective length of database: 98,166
effective search space: 10503762
effective search space used: 10503762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
S2: 40 (20.2 bits)