Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000357-TA|BGIBMGA000357-PA|undefined
(159 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0006 - 44159-44206,44805-44850,45730-45818,46377-46394,464... 30 1.0
04_04_0229 - 23766488-23766946,23767901-23768128 29 1.8
01_01_0093 + 727977-729854,729877-729930 29 1.8
11_06_0544 + 24811913-24812637,24837501-24837589,24837779-24837819 29 2.3
08_02_1067 + 24072448-24072575,24073761-24073864,24074395-240744... 29 2.3
11_06_0181 + 20985960-20987825,20987904-20989169 28 3.1
03_06_0156 + 32035503-32035769,32036436-32036539,32036734-320368... 28 3.1
01_03_0003 + 11509530-11512772 28 3.1
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 28 4.1
09_05_0014 - 20071514-20071690,20071779-20071894,20072177-200723... 27 7.1
07_03_1772 + 29411874-29413218,29413355-29413421,29413749-294138... 27 7.1
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 27 7.1
10_08_0457 + 18076911-18077272,18077356-18077475,18077554-180777... 27 9.4
03_02_0882 - 12121917-12124446,12124739-12124919,12125057-121251... 27 9.4
>05_01_0006 -
44159-44206,44805-44850,45730-45818,46377-46394,
46490-46609,46702-46772,47038-47086,47567-47658,
47769-47811,47928-48049,48143-48426,48961-49148,
49220-49336,49516-49557,49991-50101,50530-50688,
50710-50769,50850-50927,51010-51103,51182-51483,
51659-51721,51808-51936
Length = 774
Score = 29.9 bits (64), Expect = 1.0
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 3 RARND--VLGDKENVRPNPYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRT 60
RAR D +LG+ EN + P +E +T E + +N I+ DV+ ++R
Sbjct: 410 RARRDWDLLGN-ENHQAIP--SEVTAVNTEHENVGTTSPSSSNQIKKDVVAQGTEHDSRA 466
Query: 61 -RKRGNIQVENKEIEDLGENSVPRFIETRNCNKTQQP 96
R + +N +DL N VP +E + +Q+P
Sbjct: 467 VRFNFESKNQNPSFKDLVRNDVPENLEGAETHISQEP 503
>04_04_0229 - 23766488-23766946,23767901-23768128
Length = 228
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 88 RNCNKTQQPTCRPPYICKESLYSITILKR---RETKSQESLEIPNELKYRWVAESHPVSV 144
R+ +K ++PT R Y+ E++ ++ LKR R + S + +P E K R + ++ V+V
Sbjct: 2 RDRSKNRKPTQRGRYLSTEAIQAVQSLKRAALRGSPSAAAAAVPVEPKLRRLLKADMVAV 61
>01_01_0093 + 727977-729854,729877-729930
Length = 643
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 49 VILLDNSVETRTRKRGNIQVENKEIEDLGENSVPR 83
+++ S++ RTR+R I+ E +E+E++ +PR
Sbjct: 287 MVMAYTSIKRRTRRRREIREEEQELEEITLQGMPR 321
>11_06_0544 + 24811913-24812637,24837501-24837589,24837779-24837819
Length = 284
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 76 LGENSVPRFIETRNCNKTQQPTCRPPYICKESLYSITILKRRETKSQESLEIPNELKYRW 135
L EN P + RN T QPT P + ++ ++ R+T L I E +W
Sbjct: 133 LPENKFPAYRTLRNDLSTSQPTPPMPPSSAQPTITLPLVLTRQTGGSPQL-ITEEQYAQW 191
Query: 136 VAESHPV 142
PV
Sbjct: 192 AKGKQPV 198
>08_02_1067 +
24072448-24072575,24073761-24073864,24074395-24074446,
24074530-24074677
Length = 143
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 133 YRWVAESHPVSVACLCTRD 151
Y W++E HPV V+CL D
Sbjct: 23 YSWLSERHPVKVSCLPLSD 41
>11_06_0181 + 20985960-20987825,20987904-20989169
Length = 1043
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 10 GDKENVRPNPYYTEPFDPDTSPEEL---SALIVDYANMIRNDVILLDNSVETRTRKRGNI 66
G N++ YT P D D+S E++ + D + +N I +D+ E R N
Sbjct: 323 GMNSNIKRQRKYTCPSDSDSSNEQICNDDVAVPDNQSTGQNVPIEVDSEEERNARHGSNQ 382
Query: 67 QVENKEIED 75
Q K + D
Sbjct: 383 QTCKKNVTD 391
>03_06_0156 +
32035503-32035769,32036436-32036539,32036734-32036844,
32036923-32037073,32037614-32037888,32037998-32038211
Length = 373
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 7 DVLGDKENVRP-NPYYTEPFDPDTSPEELSALIVDYANMIRNDVI 50
DVL + P N YTEP+D D + L+V+ +R D+I
Sbjct: 244 DVLNAVQKTAPKNLVYTEPYDKDACLLDFDVLVVE-PRKLRKDLI 287
>01_03_0003 + 11509530-11512772
Length = 1080
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 107 SLYSITILKRRETKSQESLEIPNELKYRWVAESHPVSVACLCTRDY 152
SLY++ LKR K + LE L+ WV+ +H + C T Y
Sbjct: 937 SLYNMVALKRLTVKGCQDLEAIKGLEECWVSINHS-QINCTDTSGY 981
>07_03_1291 + 25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 33 ELSALIVDYANMIRNDVILLDNSVETRTRKRGNI 66
+L ALI Y +D L + SV+TRTR G I
Sbjct: 1483 KLDALITPYLERADSDRALGEESVQTRTRACGEI 1516
>09_05_0014 -
20071514-20071690,20071779-20071894,20072177-20072315,
20072649-20072672,20072879-20072989,20073089-20073239,
20073357-20073478,20074287-20074556
Length = 369
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 19 PYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIE 74
P + ++ + +EL+ +D N+I N V+ + +VE++ K I+++ K I+
Sbjct: 237 PEFLSLYETERLVQELAKFEIDAHNIIINQVLFDEEAVESKLLK-ARIKMQQKYID 291
>07_03_1772 + 29411874-29413218,29413355-29413421,29413749-29413896,
29415293-29415416,29416340-29416590,29416923-29418449,
29418786-29418896,29419576-29419734,29419827-29421734
Length = 1879
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 65 NIQVENKEIEDLGENSVPRFIETRNCNKTQQPTCRPPYICKESLYS 110
++++E K + E S P F R + ++ RPP+ CK L++
Sbjct: 1005 SVEIEEKSSK---EQSAPEFHIPRTPAQNKEKHNRPPFSCKPKLFT 1047
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 87 TRNCNKTQQPTCRPPYICK 105
T N NKT P RPP +CK
Sbjct: 133 TFNPNKTTPPRLRPPTLCK 151
>10_08_0457 +
18076911-18077272,18077356-18077475,18077554-18077782,
18077993-18078652,18079224-18079425,18079521-18079611,
18079780-18079837
Length = 573
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 22 TEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGE 78
T+ DP S E++++L + + +++ + NS+ T+ NI N EIE+ GE
Sbjct: 471 TKEVDPAESQEKIASLQLTF-DIVCDISRSTKNSLITKQELFHNILANNLEIEETGE 526
>03_02_0882 -
12121917-12124446,12124739-12124919,12125057-12125134,
12125731-12125764,12125864-12125975,12126053-12126238,
12126505-12126575
Length = 1063
Score = 26.6 bits (56), Expect = 9.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Query: 66 IQVENKEIEDLGENSVP 82
++VE++E+ D+GEN VP
Sbjct: 904 VEVEHEEVTDVGENVVP 920
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.132 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,844,804
Number of Sequences: 37544
Number of extensions: 184912
Number of successful extensions: 311
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 305
Number of HSP's gapped (non-prelim): 14
length of query: 159
length of database: 14,793,348
effective HSP length: 76
effective length of query: 83
effective length of database: 11,940,004
effective search space: 991020332
effective search space used: 991020332
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
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