Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000357-TA|BGIBMGA000357-PA|undefined
(159 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4951| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_16552| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.19
SB_19576| Best HMM Match : Somatomedin_B (HMM E-Value=2.7) 31 0.58
SB_29818| Best HMM Match : zf-AD (HMM E-Value=1.3) 29 1.8
SB_17502| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_17282| Best HMM Match : LRR_1 (HMM E-Value=1.1e-07) 29 2.4
SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) 29 2.4
SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_28422| Best HMM Match : TerC (HMM E-Value=4) 28 4.1
SB_45602| Best HMM Match : Ribosomal_S30AE (HMM E-Value=8) 28 4.1
SB_38186| Best HMM Match : TrfA (HMM E-Value=1.4) 28 4.1
SB_52267| Best HMM Match : Peptidase_C42 (HMM E-Value=0.98) 27 5.5
SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 27 5.5
SB_28965| Best HMM Match : Ribosomal_S9 (HMM E-Value=2.1) 27 7.2
SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1) 27 7.2
SB_14493| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 27 9.5
SB_50208| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_43864| Best HMM Match : CBS (HMM E-Value=8) 27 9.5
SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0) 27 9.5
>SB_4951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 36.7 bits (81), Expect = 0.009
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 74 EDLGENSVPRFIETRNCNKTQQPTC-RPPYICKESLYSITILKRRETKSQE--SLEIPNE 130
E LG N PR++ T C QP C + C+ L+ + ILK+++ ++ SL +
Sbjct: 50 ERLGANYFPRYLRTVTCT---QPLCWYGHFSCRPKLFKLKILKKKQNTCRQITSLRDGHR 106
Query: 131 L-KYRWVAESHPVSVACLCTR 150
L + W V++ C CT+
Sbjct: 107 LFEEFWEVVEKEVALYCQCTQ 127
>SB_16552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 74 EDLGENSVPRFIETRNCNKTQQPTC-RPPYICKESLYSITILKRRETKSQE 123
E LG N PR++ T C QP C + C+ L+ + ILK+++ ++
Sbjct: 230 ERLGANYFPRYLRTVTCT---QPLCWYGHFSCRPKLFKLKILKKKQNTCRQ 277
>SB_19576| Best HMM Match : Somatomedin_B (HMM E-Value=2.7)
Length = 149
Score = 30.7 bits (66), Expect = 0.58
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 42 ANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIETRNCNKT 93
+ + R++V L+ SV T R ++ KE+E L ENS+ FIE + NK+
Sbjct: 53 SQLSRHEVKLV--SVICHTAARSQLKATFKELEALRENSMDDFIEVQYKNKS 102
>SB_29818| Best HMM Match : zf-AD (HMM E-Value=1.3)
Length = 275
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 96 PTCRPPYICKESLYSITILKRRETKSQESLEIPNELKYRWVAESHPVSVACL 147
PT PPY+C + + S+ K+ + K Q + + +W A H + CL
Sbjct: 102 PTIHPPYLCYKCILSLGRFKKAKIKGQTF--VSKKALVQWTA--HTETCKCL 149
>SB_17502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/74 (28%), Positives = 32/74 (43%)
Query: 59 RTRKRGNIQVENKEIEDLGENSVPRFIETRNCNKTQQPTCRPPYICKESLYSITILKRRE 118
+ K ++VE K +EDLG+ V F R + + T P SI I E
Sbjct: 186 KAEKLKPMEVELKRLEDLGDAIVNDFAYMRQREQEMRDTNAPGQGAVRREVSINIKHGTE 245
Query: 119 TKSQESLEIPNELK 132
K+ ++L +LK
Sbjct: 246 AKAYQNLAQAEKLK 259
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.7 bits (61), Expect = 2.4
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 4 ARNDVLGDKENVRPNPYYTEPFDPDTSPEELSALIVDYANMIR--NDVILLDNSVETRTR 61
ARN VL +EN++P + D + E ++A + +V N ++T ++
Sbjct: 5752 ARNAVLQMEENIKPELAEQDKKSQDNNESETYRPTTEFAQIQSQVQEVSEKLNELQTSSK 5811
Query: 62 KRGNIQVENKEIEDLGENSVPRFIETRNCNKTQQPTCRP 100
+ EN ++E L E+ F CN ++ C P
Sbjct: 5812 DLKVLSFENGQVESLRES----FEICGMCNLVRRDMCYP 5846
>SB_17282| Best HMM Match : LRR_1 (HMM E-Value=1.1e-07)
Length = 651
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/62 (20%), Positives = 29/62 (46%)
Query: 33 ELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIETRNCNK 92
+L+ L + + N+ + + ++ + K ++ + N I D G N++ + NC
Sbjct: 502 KLTHLNISHNNIGKKGAKDIGEALRNKNCKLTHLNISNNNIRDEGANNIGEALRHENCKL 561
Query: 93 TQ 94
TQ
Sbjct: 562 TQ 563
>SB_20371| Best HMM Match : U-box (HMM E-Value=0.075)
Length = 515
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 20 YYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGEN 79
YY F P+ + + A I+DY + R D+IL + + + +K +V ++ + + EN
Sbjct: 229 YYMIDFHPEEQMKAILA-ILDYDDK-RKDIILESHEMRRQGKKFTVTEVSSRSLTFVQEN 286
Query: 80 SVP 82
++P
Sbjct: 287 TMP 289
>SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 27.9 bits (59), Expect = 4.1
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 28 DTSPEELSALIVDYANMIRNDVILLDN---SVET--RTRKRGNIQVENKEIEDLGENSVP 82
+ S LS ++ + AN R DV+ + S+E R ++RG I E + I+ E+ VP
Sbjct: 236 EVSDALLSMVLREGANSFRVDVVFDEYRRISIEKAEREKRRGEIGNEYRNIQP--EHRVP 293
Query: 83 --RFIETRNCNKTQ 94
R + T +CNK Q
Sbjct: 294 LWRRLLTNSCNKQQ 307
>SB_28422| Best HMM Match : TerC (HMM E-Value=4)
Length = 465
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 62 KRGNIQVENKEIEDLGENSVPRFIETRNCNKTQQP 96
K G++Q +K + G++S P + NCN+ +P
Sbjct: 178 KEGHLQDIHKGSDPAGKSSSPAVLRVPNCNRQTKP 212
>SB_45602| Best HMM Match : Ribosomal_S30AE (HMM E-Value=8)
Length = 340
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/62 (29%), Positives = 25/62 (40%)
Query: 14 NVRPNPYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEI 73
N R +PY + T P E S D +N I N + D S + N Q +E+
Sbjct: 188 NARDHPYQRNWVEAPTPPSERSPSSSDESNGIANPGFVSDESDDVAVTLEINGQPAPEEV 247
Query: 74 ED 75
D
Sbjct: 248 RD 249
>SB_38186| Best HMM Match : TrfA (HMM E-Value=1.4)
Length = 429
Score = 27.9 bits (59), Expect = 4.1
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 28 DTSPEELSALIVDYANMIRNDVILLDN---SVET--RTRKRGNIQVENKEIEDLGENSVP 82
+ S LS ++ + AN R DV+ + S+E R ++RG I E + I+ E+ VP
Sbjct: 226 EVSDALLSMVLREGANSFRVDVVFDEYRRISIEKAEREKRRGEIGNEYRNIQP--EHRVP 283
Query: 83 --RFIETRNCNKTQ 94
R + T +CNK Q
Sbjct: 284 LWRRLLTNSCNKQQ 297
>SB_52267| Best HMM Match : Peptidase_C42 (HMM E-Value=0.98)
Length = 180
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 129 NELKYRWVAESHPVSVACLCTRDYQLRYNN 158
NEL RW+A +P VA ++Q RY +
Sbjct: 120 NELSVRWMACPNPHEVAFYLLEEHQRRYGH 149
>SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3307
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 14 NVRPNPYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQV 68
NV PN Y + + +P E+S +++ A M++ I ++ T R ++V
Sbjct: 2945 NVNPNSTYEDDKMLELNPREISQRLINVAQMVKIHTIEWTPAILNDTALREGVRV 2999
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 47 NDVILLDNSVETRTRKRGNIQVE------------NKEIEDLGENSVPRFIETRNCNKTQ 94
NDV+ L+N V T +K +Q+E N ++DL T N + Q
Sbjct: 278 NDVVALENKVSTLEQKLSTLQLEKDEEQKELQTKHNAALQDLNNLQTALSAATDNRRQVQ 337
Query: 95 QPTCRPPYICKESLYSITILKRRETKSQESLEIPNELK 132
+ + + + + +E +SQ+ + N+L+
Sbjct: 338 EQLKEKQQLVISLQHDLNQVSSKEAESQQVRNLQNQLE 375
>SB_28965| Best HMM Match : Ribosomal_S9 (HMM E-Value=2.1)
Length = 346
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 67 QVENKEIEDLGENSVPRFIETRNCNKTQQPTCRPPYICKESLYSITILKRRETKSQESLE 126
++ EI+D G ++PR I + C + RP C ++ T E KSQ+ L+
Sbjct: 132 RIPTPEIQDQGSINLPRDISFKYCVEATSDPERP---CLQTRRIATAKPSLEAKSQKELQ 188
>SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1)
Length = 2568
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 27 PDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNI 66
PD SP+E++ + DY + N + N +T K+G +
Sbjct: 1106 PDASPQEITKMAKDYITELANAI----NPKDTSQEKKGTV 1141
>SB_14493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 23 EPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVP 82
E FDP +P E + +Y +I LD+ + R G I + G SVP
Sbjct: 10 EHFDPQANPGERLRVRYEYRELIAATETFLDSLIR---RYSGTIMIAIMTDNSNGMVSVP 66
Query: 83 RFI 85
R I
Sbjct: 67 RLI 69
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 13 ENVRPNPYYTEPFDPDTSP 31
ENV +PY T PF P SP
Sbjct: 43 ENVPTSPYKTSPFMPPQSP 61
>SB_50208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 26.6 bits (56), Expect = 9.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 11 DKENVRPN-PYYTEPFDPDTSPEELSA--LIVDYANMIRN-DVILLDNSVETR-TRKRGN 65
D + RP+ PY + D S +A I Y + D++L D S + + T RG+
Sbjct: 1463 DVQAYRPHVPYEITVYTSDVSGAGTNANVFIALYGSEGNTEDIVLADTSKKKKKTFDRGS 1522
Query: 66 IQVENKEIEDLGE 78
I KE+ED+G+
Sbjct: 1523 IDQFVKELEDVGD 1535
>SB_43864| Best HMM Match : CBS (HMM E-Value=8)
Length = 198
Score = 26.6 bits (56), Expect = 9.5
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 20 YYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGEN 79
+Y+E DPD E + D + + I+ ++V+ R + + V I+D
Sbjct: 101 FYSETEDPDVPTENIGVPNTDTGHCAKLKAIIDRSAVDRRFSDKPWLVV----IDDDTIM 156
Query: 80 SVPRFIETRNCNKTQQP 96
SVPR + C Q+P
Sbjct: 157 SVPRMQQLLACYDPQEP 173
>SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1101
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/25 (40%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 5 RNDVLGDK-ENVRPNPYYTEPFDPD 28
+++ LG+K E+ RP Y+++P +PD
Sbjct: 897 KSNALGEKCESCRPGTYHSDPNNPD 921
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.132 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,066,809
Number of Sequences: 59808
Number of extensions: 259266
Number of successful extensions: 399
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 387
Number of HSP's gapped (non-prelim): 23
length of query: 159
length of database: 16,821,457
effective HSP length: 77
effective length of query: 82
effective length of database: 12,216,241
effective search space: 1001731762
effective search space used: 1001731762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
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