Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000357-TA|BGIBMGA000357-PA|undefined
(159 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical pr... 31 0.38
U10438-8|AAU87835.1| 627|Caenorhabditis elegans Hypothetical pr... 31 0.51
AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical ... 29 2.0
AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical... 29 2.0
Z83230-8|CAC42303.1| 291|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z83230-7|CAB05747.1| 291|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 28 2.7
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 28 2.7
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 28 2.7
AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily a... 28 2.7
AF047885-1|AAD10538.1| 291|Caenorhabditis elegans UNC-64 syntax... 28 2.7
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 28 2.7
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 28 2.7
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 28 2.7
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 28 2.7
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 28 2.7
AB008844-1|BAA23586.1| 291|Caenorhabditis elegans syntaxin C pr... 28 2.7
AB008843-1|BAA23585.1| 291|Caenorhabditis elegans syntaxin B pr... 28 2.7
AB008842-1|BAA23584.1| 291|Caenorhabditis elegans syntaxin A pr... 28 2.7
AC087232-7|AAK09082.1| 298|Caenorhabditis elegans Hypothetical ... 28 3.6
Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical p... 27 4.7
Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical p... 27 4.7
U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase... 27 4.7
AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein. 27 4.7
AF125448-2|AAL32228.1| 582|Caenorhabditis elegans Hypothetical ... 27 4.7
Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical pr... 27 8.3
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 27 8.3
U29382-4|AAG00002.2| 324|Caenorhabditis elegans Hypothetical pr... 27 8.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF043693-8|AAB97534.1| 135|Caenorhabditis elegans Knl (kinetoch... 27 8.3
AF025470-3|AAB71057.1| 394|Caenorhabditis elegans Hypothetical ... 27 8.3
AC006832-5|AAF39998.1| 513|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical
protein F38A6.2 protein.
Length = 891
Score = 31.1 bits (67), Expect = 0.38
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 46 RNDVILLDNSVETRTRKRGNIQVENKEIEDL--GENSVPRFIETRNCNKTQQPTCRPP 101
RN+++LL +S R+ N++++++ G +S+PR I + T P+ PP
Sbjct: 53 RNEILLLQSSTVEILRRLQNLEIQDQSRSPTCSGYSSLPRRISGSKSSYTMSPSHAPP 110
>U10438-8|AAU87835.1| 627|Caenorhabditis elegans Hypothetical
protein B0280.2 protein.
Length = 627
Score = 30.7 bits (66), Expect = 0.51
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 26 DPDTSPE-ELSALIVD--YANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVP 82
DPD P + LI D + M + +L+ E +R G ++KE E+ NSV
Sbjct: 75 DPDWEPTVQFDFLIRDKKFETMQEHARLLV---FEAESRYIGLNFYDSKECENF-HNSVC 130
Query: 83 RFIETRNCNKTQQPTCRPPYICKESLYSITILKRRETKSQESLEIPNELKY 133
+ +TR+ +K +QP K S + RE + Q +E P + ++
Sbjct: 131 KR-QTRSTDKAKQPALEGKTKKKSSFFHDPFKSHREPRKQVEIEAPTDFRH 180
>AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical
protein F28H6.6 protein.
Length = 740
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 68 VENKEIEDLGENSVPRFIETRNCNKTQQPTCRPPY-ICKESLYSITILKRRETKSQES 124
V K I + +N+ RF + +TQQ TC+ P + KE ++ + S ES
Sbjct: 442 VPQKVINGILDNAKKRFEAKQLLQQTQQKTCKQPQSVSKEQMFESPEYSSSASSSAES 499
>AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical
protein Y17G7B.18b protein.
Length = 381
Score = 28.7 bits (61), Expect = 2.0
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 20 YYTEPFDPD---TSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDL 76
+Y + F P T P + + + + + LLD + E R++KR ++ + K E
Sbjct: 15 FYRDTFAPGGSKTDPLNIEIELTENPEEEKKRLGLLDPTTE-RSKKR-KVEKDEKS-EKP 71
Query: 77 GENSVPRFIETRNCNKTQQPTCRPPYICKE 106
ENS + ++ N ++ + RPP + KE
Sbjct: 72 AENSPFKKLQKNQYNSPRKDSRRPPQLSKE 101
>Z83230-8|CAC42303.1| 291|Caenorhabditis elegans Hypothetical
protein F56A8.7b protein.
Length = 291
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 32 EELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIET-RNC 90
+EL A+I AN +R + L++N+++ + GN + ++ + RF+E +
Sbjct: 78 DELMAVIKRAANKVRGKLKLIENAIDHDEQGAGNADLRIRKTQH--STLSRRFVEVMTDY 135
Query: 91 NKTQ 94
NKTQ
Sbjct: 136 NKTQ 139
>Z83230-7|CAB05747.1| 291|Caenorhabditis elegans Hypothetical
protein F56A8.7a protein.
Length = 291
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 32 EELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIET-RNC 90
+EL A+I AN +R + L++N+++ + GN + ++ + RF+E +
Sbjct: 78 DELMAVIKRAANKVRGKLKLIENAIDHDEQGAGNADLRIRKTQH--STLSRRFVEVMTDY 135
Query: 91 NKTQ 94
NKTQ
Sbjct: 136 NKTQ 139
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical protein
F57C7.4 protein.
Length = 1484
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 72 EIEDLGENSVPRFIETRNC-NKTQQPTCRPPYICKESLYSITI 113
+I L E RF++ N NKT Q T RPP+ + S+ +
Sbjct: 1210 KIAQLSEVETKRFVKIANKGNKTIQATLRPPFRSDQKSNSVAV 1252
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans
adducin-related protein protein.
Length = 679
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 8 VLGDKENVRPNPYYTEPFDPD 28
++G KE R PYY +P DP+
Sbjct: 1 MIGRKEKERERPYYRDPDDPE 21
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans
adducin-related protein protein.
Length = 732
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 8 VLGDKENVRPNPYYTEPFDPD 28
++G KE R PYY +P DP+
Sbjct: 1 MIGRKEKERERPYYRDPDDPE 21
>AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily
assigned gene nameprotein 304 protein.
Length = 397
Score = 28.3 bits (60), Expect = 2.7
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 11 DKENVRPNPYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVEN 70
D E+V N Y E PD + EEL L++D+ + + +ET + K NI V
Sbjct: 151 DTEDVEFNDY-KEVMRPDPTREELQQLVIDH--FLHHG---YSEVIETFS-KEVNIVVPK 203
Query: 71 KEIEDL-GENSVPRFI 85
K+I+++ N V R I
Sbjct: 204 KDIDNMNARNEVRRLI 219
>AF047885-1|AAD10538.1| 291|Caenorhabditis elegans UNC-64 syntaxin
class B protein.
Length = 291
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 32 EELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIET-RNC 90
+EL A+I AN +R + L++N+++ + GN + ++ + RF+E +
Sbjct: 78 DELMAVIKRAANKVRGKLKLIENAIDHDEQGAGNADLRIRKTQH--STLSRRFVEVMTDY 135
Query: 91 NKTQ 94
NKTQ
Sbjct: 136 NKTQ 139
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin
protein 1, isoform e protein.
Length = 718
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 8 VLGDKENVRPNPYYTEPFDPD 28
++G KE R PYY +P DP+
Sbjct: 1 MIGRKEKERERPYYRDPDDPE 21
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin
protein 1, isoform b protein.
Length = 732
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 8 VLGDKENVRPNPYYTEPFDPD 28
++G KE R PYY +P DP+
Sbjct: 1 MIGRKEKERERPYYRDPDDPE 21
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin
protein 1, isoform c protein.
Length = 702
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 8 VLGDKENVRPNPYYTEPFDPD 28
++G KE R PYY +P DP+
Sbjct: 1 MIGRKEKERERPYYRDPDDPE 21
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin
protein 1, isoform d protein.
Length = 682
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 8 VLGDKENVRPNPYYTEPFDPD 28
++G KE R PYY +P DP+
Sbjct: 1 MIGRKEKERERPYYRDPDDPE 21
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin
protein 1, isoform a protein.
Length = 679
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 8 VLGDKENVRPNPYYTEPFDPD 28
++G KE R PYY +P DP+
Sbjct: 1 MIGRKEKERERPYYRDPDDPE 21
>AB008844-1|BAA23586.1| 291|Caenorhabditis elegans syntaxin C
protein.
Length = 291
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 32 EELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIET-RNC 90
+EL A+I AN +R + L++N+++ + GN + ++ + RF+E +
Sbjct: 78 DELMAVIKRAANKVRGKLKLIENAIDHDEQGAGNADLRIRKTQH--STLSRRFVEVMTDY 135
Query: 91 NKTQ 94
NKTQ
Sbjct: 136 NKTQ 139
>AB008843-1|BAA23585.1| 291|Caenorhabditis elegans syntaxin B
protein.
Length = 291
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 32 EELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIET-RNC 90
+EL A+I AN +R + L++N+++ + GN + ++ + RF+E +
Sbjct: 78 DELMAVIKRAANKVRGKLKLIENAIDHDEQGAGNADLRIRKTQH--STLSRRFVEVMTDY 135
Query: 91 NKTQ 94
NKTQ
Sbjct: 136 NKTQ 139
>AB008842-1|BAA23584.1| 291|Caenorhabditis elegans syntaxin A
protein.
Length = 291
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 32 EELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIET-RNC 90
+EL A+I AN +R + L++N+++ + GN + ++ + RF+E +
Sbjct: 78 DELMAVIKRAANKVRGKLKLIENAIDHDEQGAGNADLRIRKTQH--STLSRRFVEVMTDY 135
Query: 91 NKTQ 94
NKTQ
Sbjct: 136 NKTQ 139
>AC087232-7|AAK09082.1| 298|Caenorhabditis elegans Hypothetical
protein Y92H12BR.8 protein.
Length = 298
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 106 ESLYSITILKRRETKSQESLEIPNELKYRWVAESHPVSVACLCT 149
E L++ I RRE +E+ + W+ P+ ++ LCT
Sbjct: 80 EKLFNADINTRREYIPLSLVELARLIDLGWINPRQPIDISTLCT 123
>Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 27.5 bits (58), Expect = 4.7
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 19 PYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGE 78
P+ TEPF P SP L + ++ A + D+ +LD E + + E++ L E
Sbjct: 298 PFSTEPFFPPVSPSRLKS--INVALKLIADICVLDVWDEFENLANPS-NFLSSELKKLLE 354
Query: 79 NSVPRFIET 87
+S R+ E+
Sbjct: 355 SSAERYGES 363
>Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 27.5 bits (58), Expect = 4.7
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 19 PYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGE 78
P+ TEPF P SP L + ++ A + D+ +LD E + + E++ L E
Sbjct: 298 PFSTEPFFPPVSPSRLKS--INVALKLIADICVLDVWDEFENLANPS-NFLSSELKKLLE 354
Query: 79 NSVPRFIET 87
+S R+ E+
Sbjct: 355 SSAERYGES 363
>Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 27.5 bits (58), Expect = 4.7
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 19 PYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGE 78
P+ TEPF P SP L + ++ A + D+ +LD E + + E++ L E
Sbjct: 298 PFSTEPFFPPVSPSRLKS--INVALKLIADICVLDVWDEFENLANPS-NFLSSELKKLLE 354
Query: 79 NSVPRFIET 87
+S R+ E+
Sbjct: 355 SSAERYGES 363
>Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 27.5 bits (58), Expect = 4.7
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 19 PYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGE 78
P+ TEPF P SP L + ++ A + D+ +LD E + + E++ L E
Sbjct: 298 PFSTEPFFPPVSPSRLKS--INVALKLIADICVLDVWDEFENLANPS-NFLSSELKKLLE 354
Query: 79 NSVPRFIET 87
+S R+ E+
Sbjct: 355 SSAERYGES 363
>Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 27.5 bits (58), Expect = 4.7
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 19 PYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGE 78
P+ TEPF P SP L + ++ A + D+ +LD E + + E++ L E
Sbjct: 298 PFSTEPFFPPVSPSRLKS--INVALKLIADICVLDVWDEFENLANPS-NFLSSELKKLLE 354
Query: 79 NSVPRFIET 87
+S R+ E+
Sbjct: 355 SSAERYGES 363
>U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase ii
(b) subunit protein2 protein.
Length = 1193
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 86 ETRNC-NKTQQPTCRPPYICK---ESLYSITILKRRETKSQES 124
E + C NKTQ R PY CK + L S++I R K ++S
Sbjct: 1142 ECKACRNKTQVSAVRIPYACKLLFQELMSMSIAPRLMVKPRQS 1184
>AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.
Length = 1009
Score = 27.5 bits (58), Expect = 4.7
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 19 PYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGE 78
P+ TEPF P SP L + ++ A + D+ +LD E + + E++ L E
Sbjct: 298 PFSTEPFFPPVSPSRLKS--INVALKLIADICVLDVWDEFENLANPS-NFLSSELKKLLE 354
Query: 79 NSVPRFIET 87
+S R+ E+
Sbjct: 355 SSAERYGES 363
>AF125448-2|AAL32228.1| 582|Caenorhabditis elegans Hypothetical
protein H14E04.2c protein.
Length = 582
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 33 ELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIETRNCNK 92
E+ L++DY + +D + + ++ + T KRG + E+E++ V +E N
Sbjct: 136 EIVELVIDYKIVEESDQVTIPDATQYETSKRG--KDSGSELEEVTVGHVQEILEHAFPNG 193
Query: 93 TQQPTC 98
PTC
Sbjct: 194 L--PTC 197
>Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical
protein K04G11.3 protein.
Length = 368
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 29 TSPEELSALIVDYANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVPR 83
TSPE + + +++ + I L NSV+TR + + + + E E + R
Sbjct: 203 TSPEPTYKELSNTVKLLQQENINLKNSVQTRKDQFSQLYAQKERYESTNEIEINR 257
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 103 ICKESLYSITILKRRETKSQESLEIP--NELKYRW 135
+ ++ Y + +LKRRET ++ E P N L RW
Sbjct: 552 LLEKEAYDVDLLKRRETFVEKPEEAPRINRLGRRW 586
>U29382-4|AAG00002.2| 324|Caenorhabditis elegans Hypothetical
protein R03H10.6 protein.
Length = 324
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 14 NVRPNPYYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSV 56
NV+ YY +P D + EE++ + DY + I N +L N V
Sbjct: 238 NVQNEQYYRKPIDVIVAVEEINDFLDDY-HPIENKPPVLRNMV 279
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 26.6 bits (56), Expect = 8.3
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 26 DPDTSPE-ELSALIVD--YANMIRNDVILLDNSVETRTRKRGNIQVENKEIEDLGENSVP 82
DPD P + LI D + M + +L+ E +R G ++KE E+ NSV
Sbjct: 75 DPDWEPTVQFDFLIRDKKFETMQEHARLLV---FEAESRYIGLNFYDSKECENF-HNSVC 130
Query: 83 RFIETRNCNKTQQPTCRPPYICKESLYSITILKRRETKSQESLEIPNELKY 133
+ +TR+ +K +QP K S + E+K+Q + P + ++
Sbjct: 131 KR-QTRSTDKAKQPALEGKKKKKISFFHNLFKSHSESKNQVEIGAPTDFRH 180
>AF043693-8|AAB97534.1| 135|Caenorhabditis elegans Knl (kinetochore
null) bindingprotein protein 5 protein.
Length = 135
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 49 VILLDNSVETRTRKRGNIQVENKEIEDLGENSVPRFIETRNCNKTQ-QPTCRP 100
V++ + +ET +K +++E +E+E NS + +E + + Q C+P
Sbjct: 47 VLIEEQQIETNRKKIAQLRIEKEELEFDCANSDLKSLEQMQAERDELQRKCQP 99
>AF025470-3|AAB71057.1| 394|Caenorhabditis elegans Hypothetical
protein W10D9.3 protein.
Length = 394
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 20 YYTEPFDPDTSPEELSALIVDYANMIRNDVILLDNSVE 57
++T+ + DTS E S I+D+ ++ LLDNS++
Sbjct: 92 FWTKGIEIDTSKWENSLKILDFRAFFFENLNLLDNSMD 129
>AC006832-5|AAF39998.1| 513|Caenorhabditis elegans Hypothetical
protein ZK355.1 protein.
Length = 513
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 61 RKRGNIQVENKEIEDLG-ENSVPRFIETRNCNKTQQP 96
R RG+I++ N ++L NSV +F ET+N K ++P
Sbjct: 248 RLRGDIEIRNTNFKNLAFLNSVRKF-ETKNGMKHEKP 283
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.132 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,388,556
Number of Sequences: 27539
Number of extensions: 179173
Number of successful extensions: 421
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 410
Number of HSP's gapped (non-prelim): 35
length of query: 159
length of database: 12,573,161
effective HSP length: 76
effective length of query: 83
effective length of database: 10,480,197
effective search space: 869856351
effective search space used: 869856351
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
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