GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000356-TA|BGIBMGA000356-PA|undefined
         (189 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    30   0.039
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   4.4  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    23   7.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.8  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 30.3 bits (65), Expect = 0.039
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 81  RQDICPYCGKITKSLKAHALICTQPYSYKHDFNRHCFKKHGVFLKRRPVYVMNEEVLA 138
           R + CPY     + L++H L+ T    YK D     F++  + LKR   Y  N + +A
Sbjct: 356 RCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQL-LKRHMNYYHNPDYVA 412


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 10/49 (20%)

Query: 85  CPYCGKITKSLKAH----------ALICTQPYSYKHDFNRHCFKKHGVF 123
           C  CGK+   ++ H            +C   Y+   +   HC  KH +F
Sbjct: 502 CKLCGKVVTHIRNHYHVHFPGRFECPLCRATYTRSDNLRTHCKFKHPMF 550


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 6/14 (42%), Positives = 8/14 (57%)

Query: 102 CTQPYSYKHDFNRH 115
           C   + YKH +N H
Sbjct: 15  CANAFMYKHPYNHH 28


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 84  ICPYCGKITKSLKAHALICTQPYSY 108
           + PY   + K+L+     C  PY Y
Sbjct: 222 LMPYVSTVPKNLREPCPGCVAPYGY 246


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,570
Number of Sequences: 2123
Number of extensions: 7875
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 4
length of query: 189
length of database: 516,269
effective HSP length: 60
effective length of query: 129
effective length of database: 388,889
effective search space: 50166681
effective search space used: 50166681
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)