Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000356-TA|BGIBMGA000356-PA|undefined
(189 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132864-5|CAB63393.2| 240|Caenorhabditis elegans Hypothetical ... 29 1.6
Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 28 4.8
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 28 4.8
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 27 6.4
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF067607-3|AAF98607.1| 590|Caenorhabditis elegans Hypothetical ... 27 8.4
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 27 8.4
>AL132864-5|CAB63393.2| 240|Caenorhabditis elegans Hypothetical
protein Y53H1A.2 protein.
Length = 240
Score = 29.5 bits (63), Expect = 1.6
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 23 ESEKPLKLEKHKKGILKHEKGIEIEYKICKKPIKPKVLKNVVLLQSDPDVVKKRSHKIRQ 82
+SE P ++E H+ E G +IE +I KK ++ K + LL S K+ K
Sbjct: 118 KSEHPEEIEDHEDD----EDG-QIENRI-KKFVEAKKIVVCSLLASPKTFSTKKKTKHNC 171
Query: 83 DICPYCGKITKSLKAHALICTQPYSYKHDFNRHCFK 118
CP + LK H ++ P +YK +C++
Sbjct: 172 PECPKKYTSERRLKHHIVVHRNPDAYKCQKCGYCYQ 207
>Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical
protein M03C11.2 protein.
Length = 848
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 3 DQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIEYKICKKPIKPKVL 60
D+++E DF D D E EKPLK K H + ++ ++ K +P+++
Sbjct: 158 DEKSEKQRDSDFFDDVD--EEEEKPLKCLKIFYASRTHSQLEQLAEELAKTRFQPRIV 213
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 4 QRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIE 47
Q + +SG++ + +S+K K EK KKGI+ ++ E
Sbjct: 344 QESSESGSDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQKE 387
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 4 QRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIE 47
Q + +SG++ + +S+K K EK KKGI+ ++ E
Sbjct: 344 QESSESGSDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQKE 387
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical
protein F36G3.1 protein.
Length = 964
Score = 27.5 bits (58), Expect = 6.4
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 21 VNESEKPLKLEKHKKGILKHEKGIEI--EYKICKKPIKPKVLKNVVLLQSDPDVVKKRSH 78
+NE+ K E H+ +L++E+ ++ E I K PI P V +N + S V
Sbjct: 412 LNENVKAFDAEHHENSVLEYEQLPDVFSEITIAKTPI-PVVHENSISGVSKESQVSFNQE 470
Query: 79 KIRQDICP 86
++ ++ P
Sbjct: 471 AVQNELMP 478
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 134 EEVLAQERIIMKDLLLRIQGIIKDDKPLNPFEGPQAHLAFEQ-AVKALESNQIAVDL 189
+E +R IM D +G++KD K + + P HL E+ A+ + N +D+
Sbjct: 228 QENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDI 284
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 27.1 bits (57), Expect = 8.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 3 DQRNEDSGAEDFHSDTDIVNESE-KPLKLEKHKKGILKHEKGIEIEYKICKKPIKPKVLK 61
+ +E A+D D E E K K +KH+K K + +E E + +P+ PK K
Sbjct: 530 EDEDEPEDADDEEEPEDEPAEDEPKKKKPKKHRKRPKKKKPVVEPEKEPTPEPVVPKAPK 589
>AF067607-3|AAF98607.1| 590|Caenorhabditis elegans Hypothetical
protein C18H7.6 protein.
Length = 590
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 3 DQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILK 39
+Q NED A DF + TDI+ + L+KH LK
Sbjct: 100 EQLNEDHNATDFQNHTDILTD-----MLQKHTGTFLK 131
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/84 (22%), Positives = 37/84 (44%)
Query: 22 NESEKPLKLEKHKKGILKHEKGIEIEYKICKKPIKPKVLKNVVLLQSDPDVVKKRSHKIR 81
N+ K K +K+KK K +K + KK K + + +DP+ + +++IR
Sbjct: 250 NDVSKKYKKKKNKKSKSKDKKKTASKKNKKKKKSKGESASSTPQTPNDPETGVQTANEIR 309
Query: 82 QDICPYCGKITKSLKAHALICTQP 105
D S+++ A + +P
Sbjct: 310 NDAPESNVNTALSIRSPAQVAPEP 333
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.137 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,874,099
Number of Sequences: 27539
Number of extensions: 206350
Number of successful extensions: 568
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 566
Number of HSP's gapped (non-prelim): 9
length of query: 189
length of database: 12,573,161
effective HSP length: 77
effective length of query: 112
effective length of database: 10,452,658
effective search space: 1170697696
effective search space used: 1170697696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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