BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000356-TA|BGIBMGA000356-PA|undefined
(189 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein. 27 0.11
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 23 2.4
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 23 2.4
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 23 2.4
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 23 2.4
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 23 2.4
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 23 2.4
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 23 2.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 4.3
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 7.5
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 21 7.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.9
>AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein.
Length = 80
Score = 27.1 bits (57), Expect = 0.11
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 80 IRQDICPYCGKITKSLKAHALICTQPYSYKH 110
+ + + PY + KSLK C PY YK+
Sbjct: 1 VEKVVMPYVSTMPKSLKEPCDGCAAPYGYKN 31
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1 MMDQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIEYKICKK 53
+M +R G++ +I N K ++ +H+ + + + E E K CKK
Sbjct: 157 VMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKK 209
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1 MMDQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIEYKICKK 53
+M +R G++ +I N K ++ +H+ + + + E E K CKK
Sbjct: 157 VMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKK 209
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1 MMDQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIEYKICKK 53
+M +R G++ +I N K ++ +H+ + + + E E K CKK
Sbjct: 157 VMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKK 209
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1 MMDQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIEYKICKK 53
+M +R G++ +I N K ++ +H+ + + + E E K CKK
Sbjct: 157 VMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKK 209
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1 MMDQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIEYKICKK 53
+M +R G++ +I N K ++ +H+ + + + E E K CKK
Sbjct: 157 VMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKK 209
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1 MMDQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIEYKICKK 53
+M +R G++ +I N K ++ +H+ + + + E E K CKK
Sbjct: 157 VMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKK 209
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1 MMDQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIEYKICKK 53
+M +R G++ +I N K ++ +H+ + + + E E K CKK
Sbjct: 157 VMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKK 209
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1 MMDQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIEYKICKK 53
+M +R G++ +I N K ++ +H+ + + + E E K CKK
Sbjct: 157 VMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKK 209
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/53 (18%), Positives = 22/53 (41%)
Query: 66 LQSDPDVVKKRSHKIRQDICPYCGKITKSLKAHALICTQPYSYKHDFNRHCFK 118
L +P ++KK+ +C C + + + P + H+ R C++
Sbjct: 541 LPCEPGMIKKQQGDTCCWVCDQCEEYEYVYDEYTCMDCGPGKWPHEDKRGCYQ 593
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 79 KIRQDICPYCGKITKSLK 96
K+R++I +C K K LK
Sbjct: 329 KLREEINTFCPKNNKELK 346
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 156 KDDKPLNPFEGPQAHLAFEQAVKALESNQ 184
K+ +PL P PQ + ++ + SN+
Sbjct: 39 KEQEPLPPVTPPQGENMLDMDLRGIYSNR 67
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.6 bits (41), Expect = 9.9
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 106 YSYKHDFNRHC 116
+ Y H+ N+HC
Sbjct: 1677 WGYHHNVNKHC 1687
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.137 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,766
Number of Sequences: 429
Number of extensions: 2423
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of query: 189
length of database: 140,377
effective HSP length: 54
effective length of query: 135
effective length of database: 117,211
effective search space: 15823485
effective search space used: 15823485
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)
- SilkBase 1999-2023 -