GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000354-TA|BGIBMGA000354-PA|IPR000024|Frizzled CRD
region, IPR000001|Kringle, IPR001245|Tyrosine protein kinase,
IPR011009|Protein kinase-like, IPR013806|Kringle-like fold,
IPR000719|Protein kinase, IPR008266|Tyrosine protein kinase, active
site, IPR001400|Somatotropin hormone
         (638 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   167   2e-43
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    60   4e-11
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    60   4e-11
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                50   8e-08
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    49   1e-07
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    41   3e-05
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   4.4  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  167 bits (406), Expect = 2e-43
 Identities = 98/277 (35%), Positives = 148/277 (53%), Gaps = 23/277 (8%)

Query: 355 LGQGAFGRVFQAKAPGLIPDEEFTL-VAVKMLKDEASHDLQLDFEREACLLADFDHPNIV 413
           +G G FG V + K   L PD    + VA+K LK  ++   + DF  EA ++  F+HPN++
Sbjct: 639 IGGGEFGDVCRGKLK-LPPDGRTEIDVAIKTLKPGSADKARNDFLTEASIMGQFEHPNVI 697

Query: 414 KLLGVCAIGRPMCLLFEYMGKGDLNEYLRACSTVTSFAPVEHREXXXXXXXXXXXXXXXX 473
            L GV     P+ ++ E+M  G L+ +LRA      F  ++                   
Sbjct: 698 FLQGVVTKSNPVMIITEFMENGSLDTFLRANDG--KFQVLQ----------------LVG 739

Query: 474 IARQIASGMLYLSDRKFVHRDLATRNCLINDDMVVKIADFGLSHKIY--LQDYYKGDEHD 531
           + R IASGM YL++  +VHRDLA RN L+N  +V KIADFGLS +I    +  Y      
Sbjct: 740 MLRGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYT-TRGG 798

Query: 532 AIPVRWMPLESILYNKYTLESDVWAYGVCLWEIFSFALQPYFGMTHEEVVRFLKDENVLA 591
            IPVRW   E+I + K+T  SDVW+ G+  WE+ S+  +PY+  ++++V++ ++    L 
Sbjct: 799 KIPVRWTAPEAIAFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSIEKGYRLP 858

Query: 592 CPDNTPRCVYDLMKQCWNHNPSDRPNFRVIYQTLDNI 628
            P + P  +Y LM  CW    + RP F  + QTLD +
Sbjct: 859 APMDCPEAIYQLMLDCWQKERTHRPTFANLTQTLDKL 895


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 60.5 bits (140), Expect = 4e-11
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 15/173 (8%)

Query: 474 IARQIASGMLYLSDRKFVHRDLATRNCLINDDMVVKIADFGLSHKIYLQDYYKGDEHDAI 533
           IA  +  G+ YL  +  VHRD+  +N L++ +   K+ DFG      + +          
Sbjct: 702 IALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC----ITEVMMLGSIVGT 757

Query: 534 PVRWMPLESILYNKYTLESDVWAYGVCLWEIFSFALQ-PY-FGMTHEEVVRFLKDENVLA 591
           PV   P   +L   Y    DV+A+G+  W + +  ++ PY F   H + + +   +  L 
Sbjct: 758 PVHMAP--ELLSGHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKALM 815

Query: 592 C----PDNTPRC---VYDLMKQCWNHNPSDRPNFRVIYQTLDNIQLILERGRT 637
                P+  P      + LM+QCW+  PS RP    I   L++IQ   +R ++
Sbjct: 816 IVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAKRSKS 868


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 60.5 bits (140), Expect = 4e-11
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 15/173 (8%)

Query: 474 IARQIASGMLYLSDRKFVHRDLATRNCLINDDMVVKIADFGLSHKIYLQDYYKGDEHDAI 533
           IA  +  G+ YL  +  VHRD+  +N L++ +   K+ DFG      + +          
Sbjct: 740 IALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC----ITEVMMLGSIVGT 795

Query: 534 PVRWMPLESILYNKYTLESDVWAYGVCLWEIFSFALQ-PY-FGMTHEEVVRFLKDENVLA 591
           PV   P   +L   Y    DV+A+G+  W + +  ++ PY F   H + + +   +  L 
Sbjct: 796 PVHMAP--ELLSGHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKALM 853

Query: 592 C----PDNTPRC---VYDLMKQCWNHNPSDRPNFRVIYQTLDNIQLILERGRT 637
                P+  P      + LM+QCW+  PS RP    I   L++IQ   +R ++
Sbjct: 854 IVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAKRSKS 906


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 49.6 bits (113), Expect = 8e-08
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 9/159 (5%)

Query: 474 IARQIASGMLYLSDRKFVHRDLATRNCLINDDMVVKIADFGLSHKIYLQDYYKGDEHDAI 533
           I + I   + +  +   VH D+  +N L++ +   K+ DFG S  + +    + D+    
Sbjct: 160 ILKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSS--VLIGAPNEIDKFYGT 217

Query: 534 PVRWMPLESILYNKYTLESDVWAYGVCLWEIFSFALQPYFGMTHEEVVRFLKDENVLACP 593
           P    P E I  N+ T  +D+++ G+  W++  F   P+ G+ H   + +L  +      
Sbjct: 218 PGYTAP-EVIKQNRPTPAADIYSLGIVAWQML-FRKLPFAGL-HSHTIIYLSAKGHRPID 274

Query: 594 DNTP---RCVY-DLMKQCWNHNPSDRPNFRVIYQTLDNI 628
           DN     +  Y  L KQ W+ N ++RP    +   +D +
Sbjct: 275 DNIDDEFKGTYKTLYKQMWSQNITERPTTNEVITKIDTL 313



 Score = 26.6 bits (56), Expect = 0.62
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 95  LCYEDCMAVKMQFCYNDWIVIEDQKERGVFFESRGHFRLPE 135
           +C    +   +QFC+N  IV  D K + +     G  +L +
Sbjct: 158 ICILKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTD 198


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 49.2 bits (112), Expect = 1e-07
 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 5/137 (3%)

Query: 484 YLSDRKFVHRDLATRNCLINDDMVVKIADFGLSHKIYLQDYYKGDEHDAIPVRWMPLESI 543
           YL  R  ++RDL   N L++    VK+ DFG + ++   D+ +          ++  E I
Sbjct: 481 YLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRL---DHGRKTWTFCGTPEYVAPEVI 537

Query: 544 LYNKYTLESDVWAYGVCLWEIFSFALQPYFGMTHEEVVR-FLKDENVLACPDNTPRCVYD 602
           L   + + +D W+ GV ++E+ +    P+ G    +     LK  + +  P +  R    
Sbjct: 538 LNKGHDISADYWSLGVLMFELLT-GTPPFTGGDPMKTYNIILKGIDAIEFPRSITRNATA 596

Query: 603 LMKQCWNHNPSDRPNFR 619
           L+K+    NP++R  ++
Sbjct: 597 LIKKLCRDNPAERLGYQ 613


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 41.1 bits (92), Expect = 3e-05
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 475 ARQIASGMLYLSDRKFVHRDLATRNCLINDDMVVKIADFGL 515
           A +IA G+ +L  R  V+RDL   N L++ D  +KIADFG+
Sbjct: 91  ASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGM 131


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 263 MENYFTPTFVLLLSIGGLGCVLA 285
           M ++F P  V+L   G + CV+A
Sbjct: 204 MGSFFLPMLVMLYVYGRISCVIA 226


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.139    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,773
Number of Sequences: 429
Number of extensions: 8915
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 10
length of query: 638
length of database: 140,377
effective HSP length: 62
effective length of query: 576
effective length of database: 113,779
effective search space: 65536704
effective search space used: 65536704
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)