GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000353-TA|BGIBMGA000353-PA|IPR000757|Glycoside
hydrolase, family 16, IPR008985|Concanavalin A-like lectin/glucanase
         (375 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   7.4  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query: 234 RRNSAGYDTNFHRYQLEW 251
           RR S   D N HR Q+ W
Sbjct: 88  RRQSRSMDLNAHREQMSW 105


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 315 TNGFFPDGVKNPIPKPWWN 333
           T GF     +N + K WWN
Sbjct: 351 TRGFLQPVCQNEMNKWWWN 369


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.139    0.474 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,318
Number of Sequences: 429
Number of extensions: 5860
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 375
length of database: 140,377
effective HSP length: 59
effective length of query: 316
effective length of database: 115,066
effective search space: 36360856
effective search space used: 36360856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)