Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000352-TA|BGIBMGA000352-PA|IPR001873|Na+ channel,
amiloride-sensitive
(453 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3 d... 34 0.17
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 33 0.52
At2g20760.1 68415.m02440 expressed protein 33 0.52
At5g51300.2 68418.m06360 splicing factor-related contains simila... 32 0.90
At5g51300.1 68418.m06359 splicing factor-related contains simila... 32 0.90
At1g76930.2 68414.m08956 proline-rich extensin-like family prote... 31 1.6
At1g76930.1 68414.m08955 proline-rich extensin-like family prote... 31 1.6
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 31 2.1
At1g26150.1 68414.m03192 protein kinase family protein similar t... 31 2.1
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 2.8
At3g54590.1 68416.m06040 proline-rich extensin-like family prote... 29 4.8
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 29 4.8
At2g43150.1 68415.m05358 proline-rich extensin-like family prote... 29 4.8
At2g13540.1 68415.m01493 mRNA cap-binding protein (ABH1) identic... 29 4.8
At1g61080.1 68414.m06877 proline-rich family protein 29 6.4
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 8.4
At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associa... 29 8.4
At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associa... 29 8.4
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 8.4
At3g03160.1 68416.m00312 expressed protein 29 8.4
>At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3
domain-containing protein similar to SP|Q9P6R9 Cell
cycle control protein cwf22 {Schizosaccharomyces pombe};
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 900
Score = 34.3 bits (75), Expect = 0.17
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 28 VDDELLQEYIESVWGSDPPERAAEMLQWLATLSYSSIAEHAAEYLAE-PGLVGENENNVP 86
+ D +QE +ES++ D P+ + + ++ I E+ EYL P L+ + + V
Sbjct: 798 LQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPSLIMQRQKQVA 857
Query: 87 E 87
E
Sbjct: 858 E 858
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 32.7 bits (71), Expect = 0.52
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPILVR-AKDSMPPQYSPPPGYTTYLP 453
PKPP P + +PP P +V+P K PP PPP T Y P
Sbjct: 82 PKPPTVKPPPPPYVKPPPPPTVKPPPPPYVKPPPPPTVKPPPPPTPYTP 130
>At2g20760.1 68415.m02440 expressed protein
Length = 338
Score = 32.7 bits (71), Expect = 0.52
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 390 RDADQLRRERAERLAQPKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYSPPP 446
R+ + ++R ++ KP N+ P +P G +R I ++ K + PP PPP
Sbjct: 194 REVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFLKLKTNPPPHMMPPP 250
>At5g51300.2 68418.m06360 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 31.9 bits (69), Expect = 0.90
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYSPPPGYTTYLP 453
P P S P+ PP PGS P+ + QY PPP + T P
Sbjct: 604 PWGPPVPSYSPYALPPPPPGSYHPVHGQHMPPYGMQYPPPPPHVTQAP 651
>At5g51300.1 68418.m06359 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 31.9 bits (69), Expect = 0.90
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYSPPPGYTTYLP 453
P P S P+ PP PGS P+ + QY PPP + T P
Sbjct: 604 PWGPPVPSYSPYALPPPPPGSYHPVHGQHMPPYGMQYPPPPPHVTQAP 651
>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 256
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPP--QYSPPPGYTT 450
P P + S P +K PP P K PP YSPPP YTT
Sbjct: 119 PPPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPPPSYTT 165
>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 293
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPP--QYSPPPGYTT 450
P P + S P +K PP P K PP YSPPP YTT
Sbjct: 119 PPPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPPPSYTT 165
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 405 QPKPPHNLSLIPWWKEPPIPG--SVRPILVRAKDSMPPQYSPPPGYTTYLP 453
QP P++ S + + + PP P S P PP YSPPP Y P
Sbjct: 477 QPNDPYDQSPVKFRRSPPPPPVHSPPPPSPIHSPPPPPVYSPPPPPPVYSP 527
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/50 (36%), Positives = 20/50 (40%)
Query: 404 AQPKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYSPPPGYTTYLP 453
+ P P LS P PP P P S PP+ SPPP T P
Sbjct: 60 SSPPPETPLSSPPPEPSPPSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAP 109
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 404 AQPKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSM----PPQYSPPPGYTTYLP 453
+ P PPH S P PP P P+ + PP +SPPP Y P
Sbjct: 565 SSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSP 618
>At3g54590.1 68416.m06040 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 743
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPI-LVRAKDSMPPQYSPPP 446
P P ++ S ++K PP P P V K PP YSP P
Sbjct: 698 PPPYYSPSPKVYYKSPPPPSYYSPSPKVEYKSPPPPSYSPSP 739
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 403 LAQPKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYSPPPGYTTYLP 453
+ +P PP ++L P PP P P V + PP +SPPP Y P
Sbjct: 400 VVKPSPPI-VALPP----PPPPSPPLPPPVYSPPPSPPVFSPPPSPPVYSP 445
>At2g43150.1 68415.m05358 proline-rich extensin-like family protein
similar to CRANTZ hydroxyproline-rich glycoprotein
[Manihot esculenta] gi|7211797|gb|AAF40442; similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 212
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 404 AQPKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYSPPPGYTTYLP 453
+ P PP+ +K PP P P K PP SPPP Y + P
Sbjct: 34 SSPPPPYE------YKSPPPPVKSPPPPYEYKSPPPPVKSPPPPYYYHSP 77
>At2g13540.1 68415.m01493 mRNA cap-binding protein (ABH1) identical
to mRNA cap binding protein [Arabidopsis thaliana]
GI:15192738; contains Pfam profile PF02854: MIF4G
domain; identical to cDNA nuclear cap-binding protein
CBP80 GI:8515770
Length = 848
Score = 29.5 bits (63), Expect = 4.8
Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
Query: 48 RAAEMLQWLATLSYSSIAEHAAEYLAEPGLVGENENNVPEPARDSKEAVFKVVRHCETLF 107
RA + L L + S E L +P V ++ A D K + V
Sbjct: 725 RALSETEVLLLLLFQSFLGVLKERLPDPTKVRSVQDLKSIGAEDDKPSAMDVDSENGNPK 784
Query: 108 YDCVWKGDSEECCDLLIPVFTEMGFCYAFNSRHAEKIWPWQSQAQQEQFIEAFIH 162
C G+ E+ C + +G+ AF ++A +IWP + + E F +H
Sbjct: 785 KSCE-VGEREQWC------LSTLGYLTAFTRQYASEIWPHMEKLESEVFSGEDVH 832
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYSPPPGYTT 450
P PP + L + PP P + +P+ K S PP PPP TT
Sbjct: 479 PLPPAVMPLKHFAPPPPTPPAFKPL----KGSAPPPPPPPPLPTT 519
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYSPPP 446
P P H+ P + PP P V PP YSPPP
Sbjct: 544 PPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPP 584
>At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYS-----PPPG 447
P PP P + PP P +RP + PPQY PPPG
Sbjct: 167 PPPPFGGQGPPMGRGPPPPYGMRPPPQQFSGPPPPQYGQRPMIPPPG 213
>At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYS-----PPPG 447
P PP P + PP P +RP + PPQY PPPG
Sbjct: 167 PPPPFGGQGPPMGRGPPPPYGMRPPPQQFSGPPPPQYGQRPMIPPPG 213
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 406 PKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYSPPP 446
P P +S P P +P P+ S PP SPPP
Sbjct: 145 PSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPPP 185
>At3g03160.1 68416.m00312 expressed protein
Length = 130
Score = 28.7 bits (61), Expect = 8.4
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 53 LQWLATLSYSSIAEHA-AEYLAEPGLVGENENNVPEPARDSKEAVFKVVRHCETLFYDCV 111
L+W+ L Y++ AE L PGL G + V R+ + +V C L D
Sbjct: 3 LEWVV-LGYAAAAEAIMVVLLTMPGLDGLRKGLVAV-TRNLLKPFLSIVPFCLFLLMDIY 60
Query: 112 WKGDSEECCD 121
WK ++ CD
Sbjct: 61 WKYETMPSCD 70
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.134 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,137,616
Number of Sequences: 28952
Number of extensions: 465793
Number of successful extensions: 1272
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1192
Number of HSP's gapped (non-prelim): 97
length of query: 453
length of database: 12,070,560
effective HSP length: 83
effective length of query: 370
effective length of database: 9,667,544
effective search space: 3576991280
effective search space used: 3576991280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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