Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000351-TA|BGIBMGA000351-PA|IPR000299|Band 4.1,
IPR000798|Ezrin/radixin/moesin ERM, IPR007858|Dpy-30
(1156 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g22795.1 68415.m02704 expressed protein 39 0.022
At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar... 37 0.068
At2g27280.1 68415.m03278 hypothetical protein 36 0.12
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 36 0.16
At3g17160.1 68416.m02189 expressed protein 36 0.21
At3g12200.1 68416.m01521 protein kinase family protein contains ... 36 0.21
At1g30650.1 68414.m03748 WRKY family transcription factor contai... 35 0.36
At1g67890.1 68414.m07752 protein kinase family protein contains ... 34 0.48
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 34 0.63
At3g52890.2 68416.m05829 protein kinase (KIPK) identical to prot... 34 0.63
At3g52890.1 68416.m05828 protein kinase (KIPK) identical to prot... 34 0.63
At2g41960.1 68415.m05191 expressed protein 33 0.84
At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger) fa... 33 1.1
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 33 1.1
At1g10550.1 68414.m01188 xyloglucan:xyloglucosyl transferase, pu... 33 1.1
At2g28360.1 68415.m03447 SIT4 phosphatase-associated family prot... 33 1.5
At4g08550.1 68417.m01406 glutaredoxin-related contains Pfam prof... 32 1.9
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 32 1.9
At2g46980.2 68415.m05869 expressed protein 32 1.9
At2g46980.1 68415.m05868 expressed protein 32 1.9
At2g35670.1 68415.m04375 transcription factor, putative / fertil... 32 1.9
At1g61690.1 68414.m06958 tetratricopeptide repeat (TPR)-containi... 32 1.9
At1g30320.1 68414.m03708 remorin family protein contains Pfam do... 32 1.9
At5g04870.1 68418.m00510 calcium-dependent protein kinase isofor... 32 2.6
At5g01370.1 68418.m00050 expressed protein 32 2.6
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 32 2.6
At3g28770.1 68416.m03591 expressed protein 32 2.6
At3g23270.1 68416.m02933 regulator of chromosome condensation (R... 32 2.6
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 32 2.6
At1g70070.1 68414.m08062 DEAD/DEAH box helicase, putative simila... 32 2.6
At5g61330.1 68418.m07696 rRNA processing protein-related contain... 31 3.4
At5g41020.1 68418.m04986 myb family transcription factor contain... 31 3.4
At4g32610.1 68417.m04643 mitochondrial glycoprotein family prote... 31 3.4
At4g25880.2 68417.m03722 pumilio/Puf RNA-binding domain-containi... 31 3.4
At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containi... 31 3.4
At4g03565.1 68417.m00490 expressed protein 31 3.4
At3g57780.1 68416.m06436 expressed protein 31 3.4
At3g54060.1 68416.m05977 hypothetical protein mucin MUC3, Homo s... 31 3.4
At2g20020.1 68415.m02340 expressed protein 31 3.4
At2g41550.1 68415.m05135 expressed protein 31 4.5
At5g19260.1 68418.m02293 expressed protein various predicted pro... 31 5.9
At3g56150.1 68416.m06241 eukaryotic translation initiation facto... 31 5.9
At2g07260.1 68415.m00833 hypothetical protein 31 5.9
At2g04495.1 68415.m00454 expressed protein 31 5.9
At1g65660.1 68414.m07450 zinc knuckle (CCHC-type) family protein... 31 5.9
At1g61215.1 68414.m06898 DNA-binding bromodomain-containing prot... 31 5.9
At1g29470.1 68414.m03605 dehydration-responsive protein-related ... 31 5.9
At5g53620.2 68418.m06662 expressed protein 30 7.8
At5g53620.1 68418.m06661 expressed protein 30 7.8
At5g39840.1 68418.m04828 ATP-dependent RNA helicase, mitochondri... 30 7.8
At5g36030.1 68418.m04340 Ulp1 protease family protein contains P... 30 7.8
At3g29710.1 68416.m03745 hypothetical protein contains Pfam prof... 30 7.8
At2g38250.1 68415.m04697 DNA-binding protein-related contains si... 30 7.8
At2g17150.1 68415.m01980 RWP-RK domain-containing protein simila... 30 7.8
At2g03140.1 68415.m00267 CAAX amino terminal protease family pro... 30 7.8
At1g77270.1 68414.m08999 expressed protein 30 7.8
At1g48980.1 68414.m05491 hypothetical protein 30 7.8
At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF052... 30 7.8
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 38.7 bits (86), Expect = 0.022
Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Query: 341 SGKTEYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNPSETNDETHN 400
S + E +T ++ + + + + +++ + +S E +++ + K E S + +ET
Sbjct: 558 SKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKE 617
Query: 401 NSAETATISPASDVDALSRKSSAKSQKSNVEPDLLDTQNDT----KLSSVSDHVAEPKDS 456
ET +S ++ ++ +K VE + T DT K +SVSD + +
Sbjct: 618 KETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSD-TEQKQSE 676
Query: 457 FTSINEQSKISRILKGNNGLKLSDLDTKISSE 488
TS E+S + + S DT + E
Sbjct: 677 ETSEKEESNKNGETEVTQEQSDSSSDTNLPQE 708
Score = 33.9 bits (74), Expect = 0.63
Identities = 38/209 (18%), Positives = 83/209 (39%), Gaps = 9/209 (4%)
Query: 343 KTEYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNPSETNDETHNNS 402
K E + ++N + T + E + ++ + E + K+E +ET D ++S
Sbjct: 476 KVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSS 535
Query: 403 AETATISPASDV---DALSRKSSAKSQKSNVEPDLLDTQNDTK---LSSVSDHVAEPKDS 456
E + +A S++ S +++ E + +Q +TK + + P++
Sbjct: 536 QEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEE 595
Query: 457 FTSINEQSKISRILKGN-NGLKLSDLDTKISSE-TTNGNVSGPNSPKVLAEPAVTNQTGS 514
T E KI + + K + +TK E ++N + N+ E N+ +
Sbjct: 596 -TKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEKKT 654
Query: 515 AYVSIVVVEPNQQVANKILPTKQTEKKEE 543
+ + N + +++T +KEE
Sbjct: 655 DEDTSESSKENSVSDTEQKQSEETSEKEE 683
>At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar to
gb|U06698 neuronal kinesin heavy chain from Homo sapiens
and contains a PF|00225 Kinesin motor domain. EST
gb|AA042507 comes from this gene; identical to cDNA
MKRP1 mRNA for kinesin-related protein, GI:16902291,
kinesin-related protein [Arabidopsis thaliana]
GI:16902292
Length = 890
Score = 37.1 bits (82), Expect = 0.068
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 439 NDTKLSSVSDHVAEPKDSFTSINEQSKISRILK--GNNG-LKLSDLDTKISSETTNGNVS 495
+D +S+VS+H+ EP+D +S++E +K R K G G LKL D + T+GN S
Sbjct: 510 DDGAVSTVSEHLKEPRDGNSSLDEMTKDRRKNKTRGMLGWLKLKKSDGVAGTLPTDGNQS 569
Query: 496 -GPNSPKVLAEPAVTNQTGSAYVSIVVVEPNQQVANKI 532
SP ++ T T + + P + VA +
Sbjct: 570 QASGSPSSSSKYTQTKTTRRENAAAIKSIPEKTVAGDL 607
>At2g27280.1 68415.m03278 hypothetical protein
Length = 427
Score = 36.3 bits (80), Expect = 0.12
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 371 RQSHVLREREKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKSNV 430
R++ L+E K + + E+ ET E S E +SP S LS K S K Q +++
Sbjct: 337 REAGRLKELRKVDRLE-ELRKEETRKEKKRKSPEKE-VSPDSGDFGLSSKKSVKPQDASI 394
Query: 431 EPDLLDTQNDTKLSSVSDHVAEPKDSFTSINEQSKISR 468
+ + +TQ T+ D +A K+ F S +++KI +
Sbjct: 395 KEEAKETQKATR----EDAIATAKERFLS-RKKAKIEK 427
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 35.9 bits (79), Expect = 0.16
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 380 EKQNSTKSEVNPSETNDETHNNSAETATISPA--SDVDALSRKSSAKSQKSNVEPDLLDT 437
+KQ TK+E + + +++ N+ E T++ S D L R QK
Sbjct: 294 KKQTDTKTESSDDDDDEKEENSKTEKKTVADKKKSVADFLKRIKKNSPQKGKETTSKNQK 353
Query: 438 QNDTKLSSVSDHVAEPKDSFTSINEQSKIS-RILKGNNGLKLSDLDTKISSETT 490
+ND + +DH + K E SK+ R L+ + G K +++ S ++
Sbjct: 354 KNDGNVKKENDH--QKKSDGNVKKENSKVKPRELRSSTGKKKVEVENNNSKSSS 405
>At3g17160.1 68416.m02189 expressed protein
Length = 165
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 868 DEQDSETGEERNEDDFDEDIDLYSNVLKKLLPDIVVSLEASDDFICEKAMRQPEGDERLD 927
D+ D + ++ +EDD + + DL + L + + ++ +ASD E + + EGDE ++
Sbjct: 62 DDDDDDDDDDEDEDDEEGEEDLGTEYLVRPVGEVEDEDDASDFDPEENGLDEEEGDEEIE 121
Query: 928 EEIV 931
E+ V
Sbjct: 122 EDDV 125
>At3g12200.1 68416.m01521 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 571
Score = 35.5 bits (78), Expect = 0.21
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 351 QNRARRTVQFERRPSQRFARRQSHVLREREKQNS--TKSEVNPSETNDETHNNSA----- 403
+++ARR + +R +R +S V R E T +E S ++ + +
Sbjct: 300 KDKARRNSLPGKFGKERVSREKSEVSRSLENLYPFWTNTETGSSSSSQPASSTNGAEDKL 359
Query: 404 ETATISPASDVDALSRKSSAKSQKSNVEPDLLDTQNDTKLSSVSDHVAEPKDSFTSINEQ 463
ET I P+ D +S +S KS +S ++PD+ +T ++ A PK++ +E+
Sbjct: 360 ETKRIDPSCDTLKISEFTSQKSDESLIDPDIAVYSTETP----AEENALPKETENIFSEE 415
Query: 464 SKI 466
S++
Sbjct: 416 SQL 418
>At1g30650.1 68414.m03748 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 430
Score = 34.7 bits (76), Expect = 0.36
Identities = 28/151 (18%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 321 PVKGPSARQNFFRMGSRFQYSGKTEYQTTQQNRARRTVQFERRPSQRFARRQSHVLRERE 380
P+KG + ++R S S + + + ++ + + + + + +++ +
Sbjct: 229 PIKGSPFPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPIQRNALAGSTR 288
Query: 381 KQNSTKSEVNPSETNDETHNNS---AETATISPASDVDALSRKSSA-KSQK-SNVEPDLL 435
S+ S NPS+ + N+S ++ P+S + SSA K ++ ++E + +
Sbjct: 289 SSTSSSSNPNPSKPSTANVNSSSIGSQNTIYLPSSTTPPPTLSSSAIKDERGDDMELENV 348
Query: 436 DTQNDTKLS----SVSDHVAEPKDSFTSINE 462
D +D +++ + DH +P D F + E
Sbjct: 349 DDDDDNQIAPYRPELHDHQHQPDDFFADLEE 379
>At1g67890.1 68414.m07752 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 765
Score = 34.3 bits (75), Expect = 0.48
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 371 RQSHVLREREKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKSNV 430
+Q NS KSE SE+N +N + + ++ AS + SS+ K ++
Sbjct: 414 QQKEEAHHSNSYNSVKSESLASESNKPANNENMGSVNVNSASSASSCGSTSSSVMNKVDM 473
Query: 431 EPDLLD 436
+ D LD
Sbjct: 474 DSDCLD 479
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 33.9 bits (74), Expect = 0.63
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 362 RRPSQRFARRQSHVLRE---REKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALS 418
RR ++ R++ LR+ REK ++ + S T++E + ++ +S ASD +A +
Sbjct: 255 RRKAELLERKKRKKLRQKEQREKDQKKDAKEDESTTSEEQQYPAEPSSPLSVASDSEAQT 314
Query: 419 RKSSAKSQKSNV-EPDLLDTQN 439
S S++ EP +L+T N
Sbjct: 315 PDSLPIDDSSSLEEPQVLETNN 336
>At3g52890.2 68416.m05829 protein kinase (KIPK) identical to protein
kinase KIPK (KCBP-interacting protein kinase)
[Arabidopsis thaliana] gi|7716430|gb|AAF68383
Length = 934
Score = 33.9 bits (74), Expect = 0.63
Identities = 40/191 (20%), Positives = 79/191 (41%), Gaps = 9/191 (4%)
Query: 387 SEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKSNVEPDLLDTQNDTKLSSV 446
S V+ E + + NS+ + +S +S+ D + K S ++ +++ + + SS
Sbjct: 417 SSVSNKEAHQGSDENSSGSCNVSQSSEADIVIMKQDVSSSNNSGIGAMVEKETENPTSSE 476
Query: 447 S-DHVAEPKDSF------TSINEQSKISRILKGNNGLKLSDLDTKISSETTNGNVSGPNS 499
+ KDS TSI+E+S +SR GN D+ + S
Sbjct: 477 KFEFSLSSKDSLGDYSRSTSISEESNLSRFSCGNKPHMSMDVRWEAIKHIKVQYGSLGLR 536
Query: 500 PKVLAEPAVTNQTGSAYVSIVVVEPNQQVANKILPTKQTEKKEEITPKLHTMSALSPWLD 559
L + G+ Y++ ++ N A K++ + ++++ +P+ + LD
Sbjct: 537 HFNLLKKLGCGDIGTVYLA-ELIGTNCLFAIKVMDNEFLARRKK-SPRAQAEREILKMLD 594
Query: 560 TPDLPFLESDF 570
P LP L + F
Sbjct: 595 HPFLPTLYAQF 605
>At3g52890.1 68416.m05828 protein kinase (KIPK) identical to protein
kinase KIPK (KCBP-interacting protein kinase)
[Arabidopsis thaliana] gi|7716430|gb|AAF68383
Length = 934
Score = 33.9 bits (74), Expect = 0.63
Identities = 40/191 (20%), Positives = 79/191 (41%), Gaps = 9/191 (4%)
Query: 387 SEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKSNVEPDLLDTQNDTKLSSV 446
S V+ E + + NS+ + +S +S+ D + K S ++ +++ + + SS
Sbjct: 417 SSVSNKEAHQGSDENSSGSCNVSQSSEADIVIMKQDVSSSNNSGIGAMVEKETENPTSSE 476
Query: 447 S-DHVAEPKDSF------TSINEQSKISRILKGNNGLKLSDLDTKISSETTNGNVSGPNS 499
+ KDS TSI+E+S +SR GN D+ + S
Sbjct: 477 KFEFSLSSKDSLGDYSRSTSISEESNLSRFSCGNKPHMSMDVRWEAIKHIKVQYGSLGLR 536
Query: 500 PKVLAEPAVTNQTGSAYVSIVVVEPNQQVANKILPTKQTEKKEEITPKLHTMSALSPWLD 559
L + G+ Y++ ++ N A K++ + ++++ +P+ + LD
Sbjct: 537 HFNLLKKLGCGDIGTVYLA-ELIGTNCLFAIKVMDNEFLARRKK-SPRAQAEREILKMLD 594
Query: 560 TPDLPFLESDF 570
P LP L + F
Sbjct: 595 HPFLPTLYAQF 605
>At2g41960.1 68415.m05191 expressed protein
Length = 1215
Score = 33.5 bits (73), Expect = 0.84
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Query: 386 KSEVNPSETNDETHNNSAETATISPASD--VDALSRKSS-AKSQKSNVEPDLLDTQNDTK 442
K EV+ + ND ++ + S +++ +++ S S SQ+S +L+DTQND
Sbjct: 870 KMEVHITLKNDYLYSKDPMMSRSSSSNNGNIESSSMSDSEVASQQSEGRENLVDTQNDMP 929
Query: 443 --LSSVSDHVAEPKDSFTSINEQSKISRILKGNNGLKLSDLDTKISSETTNGNVSGPNSP 500
+ + V E + + IS + N KLS + S+ V G N+
Sbjct: 930 DCHEKMVEKVTEMSMDERDVLKIKNISNLPADNGESKLSGTPFMVPSQNMENMVPGLNTG 989
Query: 501 KVLAEP 506
L++P
Sbjct: 990 SYLSQP 995
>At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger)
family protein contains similarity to RING-H2 zinc
finger protein ATL6 [Arabidopsis thaliana] GI:4928403;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 289
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 427 KSNVEPDLLDTQNDTKLSSVSDHVAEPKDSF-TSINEQSKISRILKGNNGLKLSDLDTKI 485
+ N++P+ + + + + ++ E +D TS + + +SR GNN K+ L K
Sbjct: 157 RRNLDPNAPENIKELIIEVIQENAHENRDQEQTSTSNEVMLSRQSSGNNERKIETLPDKF 216
Query: 486 SSETTNGNVSGPNSPK 501
S T G+ N P+
Sbjct: 217 SRSKTTGHSIVRNKPE 232
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 333 RMGSRFQYSGKTEYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNPS 392
R SR + + + + ++ R Q+ERR ++ RQ +E+EK+ K E+
Sbjct: 457 RERSRKEREQRRKLEDAERAYQTRLRQWERREREKEKERQYEKEKEKEKERKRKKEIRYE 516
Query: 393 ETNDETHNNS 402
E +E ++S
Sbjct: 517 EEEEEDDDDS 526
>At1g10550.1 68414.m01188 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
endoxyloglucan transferase related protein EXGT-A3
GI:2154609 from [Arabidopsis thaliana]
Length = 310
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 580 KIHYDIENDVIAIARKYKSQIRATVIASGITYGGREDVLFYWF 622
K H +I+ +++ +R+ I+ V A+G T GRE+ ++WF
Sbjct: 114 KSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWF 156
>At2g28360.1 68415.m03447 SIT4 phosphatase-associated family protein
contains Pfam profile: PF04499 SIT4
phosphatase-associated protein
Length = 826
Score = 32.7 bits (71), Expect = 1.5
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 388 EVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKSNVEPDLLDTQNDTKLSSVS 447
+VN +ET + ++S++ + + D L+ KS N+ P L T + T ++ S
Sbjct: 641 DVNMNETTNANDSSSSDDELLVEEEEDDDLTEKS------KNISPSNLSTSDSTSINISS 694
Query: 448 DHVAEPKD-SFTSINEQSKISRILKGNNGLKLSDLDTKISSETTNGNVSGPNSPKVLA 504
++ EP D TS + I + + + SSE+++ P+SP V A
Sbjct: 695 ENNDEPSDMQVTSSSLNPFIDVPMLDVKPEPVIPNSSPTSSESSSLGHKSPSSPAVRA 752
>At4g08550.1 68417.m01406 glutaredoxin-related contains Pfam profile
PF04784: Protein of unknown function, DUF547, weak hit
to PF00462: Glutaredoxin
Length = 587
Score = 32.3 bits (70), Expect = 1.9
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 10/128 (7%)
Query: 371 RQSHVLREREKQNSTKSEVNPSETNDETHNNSAE--TATISPASDVDALSRKSSAKSQKS 428
+Q + ER+ EV+P + N E SAE +SP +V+ +K ++K
Sbjct: 6 KQQNTEEERKSAEIIAKEVSPKQQNVEEERKSAEIIAKEVSPKHNVE---KKEEEFTRKP 62
Query: 429 NVEPDLLDTQNDTKLSSVSDHVAEPKDSFTSINEQSKISRILKGNNGLKLSDLDTKISSE 488
VE + + + ++ S+ H E D+ S++E + ++ +++ TK E
Sbjct: 63 VVEIE----EEEEEMESIDIHEEEEGDNNVSLDEIMSVDSSDDDDDSESSAEI-TKACEE 117
Query: 489 TTNGNVSG 496
T SG
Sbjct: 118 TVVDERSG 125
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 32.3 bits (70), Expect = 1.9
Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 1/131 (0%)
Query: 345 EYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNPSETNDETHNNSAE 404
+ Q+ QQ++ + +Q R P Q A + S V PS+ N A+
Sbjct: 327 QQQSQQQHQPQEQLQQLRSPQQPLAHPHQPTRVQGLVNQKVTSPVMPSQPPVAQPGNHAK 386
Query: 405 TATISPASDVDALSRKSSAKSQKSNVEP-DLLDTQNDTKLSSVSDHVAEPKDSFTSINEQ 463
T + D + K S ++P + LD + + LS +++ E +F +
Sbjct: 387 TVSAETEPSDDRILGKRSIHELLQQIDPSEKLDPEVEDILSDIAEDFVESITTFGCSLAK 446
Query: 464 SKISRILKGNN 474
+ S IL+ +
Sbjct: 447 HRKSDILEAKD 457
>At2g46980.2 68415.m05869 expressed protein
Length = 516
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 364 PSQRFARRQSHVLREREKQNSTKSEVN-----PSETNDETHNNSAETATISPASDVDALS 418
P ++ RR++ V++ R+ + K E + S++N + S ET S +SD S
Sbjct: 321 PKKQRGRRKNTVVKCRKAHSRKKDEADWSRKEASKSNTPPRSESTETGKRSSSSDKKGSS 380
Query: 419 RKSSAKSQKSNVEPDLLDTQNDTKLSSVSDHVAEPKDS 456
+S+ +PD+ + D S ++ A P+ S
Sbjct: 381 HDLHPQSKARKQKPDISTREGDFHPSPEAEAAALPEMS 418
>At2g46980.1 68415.m05868 expressed protein
Length = 516
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 364 PSQRFARRQSHVLREREKQNSTKSEVN-----PSETNDETHNNSAETATISPASDVDALS 418
P ++ RR++ V++ R+ + K E + S++N + S ET S +SD S
Sbjct: 321 PKKQRGRRKNTVVKCRKAHSRKKDEADWSRKEASKSNTPPRSESTETGKRSSSSDKKGSS 380
Query: 419 RKSSAKSQKSNVEPDLLDTQNDTKLSSVSDHVAEPKDS 456
+S+ +PD+ + D S ++ A P+ S
Sbjct: 381 HDLHPQSKARKQKPDISTREGDFHPSPEAEAAALPEMS 418
>At2g35670.1 68415.m04375 transcription factor, putative /
fertilization-independent seed 2 protein (FIS2)
identical to GB:AF096095
Length = 632
Score = 32.3 bits (70), Expect = 1.9
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 363 RPSQRFARRQSHVLREREKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALSRKSS 422
R Q +A+R + RE + + SE NDE ++ E ++ ASD+ ++ +
Sbjct: 271 RRKQLYAKR--YKARETQPAIAESSEPKVLHVNDENVSSPPEAHSLEKASDILTTTQPAI 328
Query: 423 AKSQKSNVEPDLLDTQNDTKLSSVSDHVAEPKDSFTSINEQSKISRILKGNNGLKLSDLD 482
A+S + V P + ND +SS + K+ T N + + K + K SD+
Sbjct: 329 AESSEPKV-PHV----NDENVSSTPRAHSSKKNKSTRKNVDN-VPSPPKTRSSKKTSDIL 382
Query: 483 TKISSETTNGNVSGPNSPKV 502
T TT ++ + PKV
Sbjct: 383 T-----TTQPTIAESSEPKV 397
>At1g61690.1 68414.m06958 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 1155
Score = 32.3 bits (70), Expect = 1.9
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 344 TEYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNPSETNDETHNNSA 403
T +T RA R + P R A Q +L ++K + + E +E +E +
Sbjct: 452 TSSETVDTTRAERDTSLKPPPRSRLAI-QKELLAVKKKALTLRREGKFNEAEEELKKGAV 510
Query: 404 ETATISPASDVDALSRKSSAKSQKSNVEPDLLDTQNDTKLSSVSDHVAEP 453
+ + L+ A +K N PD+ +D ++ + + +P
Sbjct: 511 LQNQLDELDNSSKLAATGKATREKGNDLPDISSLDDDGEVDVKDEELNDP 560
>At1g30320.1 68414.m03708 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 509
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 373 SHVLREREKQNSTKSEVNPSETN--DETHNNSAETATISPASDVDALSRKSSAKSQKSNV 430
+++ RE K NS S +PS D++ + + SD D + + + K
Sbjct: 28 NNMKREGSKSNSNSSRTSPSRLQIPDDSEFSKNSLLASNSYSDDDVAATTTDIEVAKLPN 87
Query: 431 EPDLLDTQNDTKLSSVSDHVAEPKDSFTSINEQSKISRILKGN 473
EP L T+ND + S P++ N+Q ++ + KG+
Sbjct: 88 EPVLYPTENDNQGSKDRCEGVVPRE-----NDQPRLQQFRKGD 125
>At5g04870.1 68418.m00510 calcium-dependent protein kinase isoform
AK1 (AK1) identical to calcium-dependent protein kinase,
isoform AK1 (CDPK) [Arabidopsis thaliana]
SWISS-PROT:Q06850; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 610
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 392 SETNDETHNNSAETATI-SPASDVDALSRKSSAKSQKSNVEPDLLDTQNDTKLSSVSDHV 450
S +DE N E T+ P +DV+ R+ +S+ +E L+++ +TK + S+
Sbjct: 49 SRLSDEVQNKPPEQVTMPKPGTDVETKDREIRTESKPETLEEISLESKPETKQETKSETK 108
Query: 451 AEPK 454
E K
Sbjct: 109 PESK 112
>At5g01370.1 68418.m00050 expressed protein
Length = 427
Score = 31.9 bits (69), Expect = 2.6
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 392 SETNDETHNNSAETATISPASDVDALSRKSSAKSQKSNVEPDLLDTQNDTKL-SSVSDHV 450
SE+ E ETAT S S A ++ S+ K ++ D +T+ TKL + +SD
Sbjct: 320 SESASELSTKQVETATKSSCSSSPAKTKTSTKKENNNSTNNDSEETEFITKLMNMLSDLS 379
Query: 451 AEPKDSFTSINEQS 464
E S T ++ S
Sbjct: 380 EEDMKSSTWVSTSS 393
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 31.9 bits (69), Expect = 2.6
Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 4/132 (3%)
Query: 336 SRFQYSGKTEYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNPSETN 395
S+ + SGK E + + + ER+ + + + E EK+ S
Sbjct: 310 SKVKESGKNEKDASSSQDESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKE 369
Query: 396 DETHNNSAETATISPASDVDALSRK----SSAKSQKSNVEPDLLDTQNDTKLSSVSDHVA 451
+E N E ++ +++ K SS++ N E + +++ K ++ S+
Sbjct: 370 EEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKKSSESQRKENTNSEKKI 429
Query: 452 EPKDSFTSINEQ 463
E +S S N Q
Sbjct: 430 EQVESTDSSNTQ 441
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.9 bits (69), Expect = 2.6
Identities = 27/142 (19%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 366 QRFARRQSHVLREREKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKS 425
Q +++S +E +N KS+ +DE+ N A + ++ +K+
Sbjct: 1466 QSGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSDESKN 1525
Query: 426 QKSNVEPDLLDTQNDTKLS--SVSDHVAEPKDSFTSINEQSKISRILKGNNGLKLSDL-- 481
+ D+Q D+ S + DS T +++SK +++ ++ K+ +
Sbjct: 1526 EILMQADSQADSQTDSDESKNEILMQADSQADSQTD-SDESKNEILMQADSQAKIGESLE 1584
Query: 482 DTKISSETTNGNVSGPNSPKVL 503
D K+ + NG+ G + K +
Sbjct: 1585 DNKVKGKEDNGDEVGKENSKTI 1606
>At3g23270.1 68416.m02933 regulator of chromosome condensation (RCC1)
family protein contains Pfam domain PF00415: Regulator of
chromosome condensation (RCC1); similar to zinc finger
protein (GI:15811367) [Arabidopsis thaliana]; similar to
chromosome condensation regulator protein (GI:22770461)
[Cicer arietinum]
Length = 1045
Score = 31.9 bits (69), Expect = 2.6
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 360 FERRPSQRFARRQSHVLREREKQNSTKSEVNP-SETNDETHNNSA--ETATISPASDVDA 416
FE SQ A ++ + E ++ E +T ++ +NS+ ET++ S A +A
Sbjct: 881 FESINSQAEAYLNANKVSETSPLTTSGQEQETYQKTEEQVPSNSSITETSSSSRAPSTEA 940
Query: 417 LSRKSSAKSQKSNVEPDLLDT-QNDTKLSSVSDHVAEPKDSFTSINEQSKISRILKGNNG 475
S + S K K EP + T + D + + V K F Q++ +
Sbjct: 941 SSSRISGKESKEQFEPGVYVTYEVDMNGNKIFRRVRFSKKRFD--EHQAEDWWTKNKDRL 998
Query: 476 LKLSDLDTKISSETTNGNVS-GPNSPKVLAEPAVTNQT 512
LK ++ SS ++N S P +P+ ++P+V Q+
Sbjct: 999 LKCYSSNSSSSSSSSNPTASDSPVAPQPPSDPSVPEQS 1036
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 383 NSTKSEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKSNVEPDLLDTQNDTK 442
N K+E N SET + T +S E + PA D ++++SS + + L+++QN+ K
Sbjct: 171 NEEKAEENASETEESTEKSSKE---VFPAGDQAEITKESSTGDGAWSTQ--LVESQNEKK 225
Query: 443 LSSVS 447
S
Sbjct: 226 AQQSS 230
>At1g70070.1 68414.m08062 DEAD/DEAH box helicase, putative similar
to SP|P35207 Antiviral protein SKI2 {Saccharomyces
cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 1171
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 868 DEQDSETGEERNEDDFDEDIDLYSNV 893
+E+D E EE +EDD DE D Y N+
Sbjct: 64 EEEDDEEEEEEDEDDDDEAADEYDNI 89
>At5g61330.1 68418.m07696 rRNA processing protein-related contains
weak similarity to rRNA processing protein EBP2
(EBNA1-binding protein homolog) (Swiss-Prot:P36049)
[Saccharomyces cerevisiae]
Length = 436
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 864 FEKGDEQDSETGEERNEDDFDEDIDLYSNVLKKL 897
FE G++++SE+G+E N+D+ D ++ +K+L
Sbjct: 91 FEDGNDKESESGDEGNDDNKDAQMEELEKEVKEL 124
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 31.5 bits (68), Expect = 3.4
Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 10/140 (7%)
Query: 377 REREKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKSNVEPDLLD 436
++R K+ SE ++ S ET S A D + RK K K D+++
Sbjct: 97 KKRSKETKADSEAEDDGVEKKSKEKSKETKVDSEAHD--GVKRKK--KKSKKESGGDVIE 152
Query: 437 TQNDTKLSSVSD-HVAEPKDSFTSINEQSKISRILKGNNGLKLSDLDTKISSETTNGNVS 495
+T+ S VSD + K T + + I + +K N K +D+ + +
Sbjct: 153 ---NTESSKVSDKKKGKRKRDDTDLGAEENIDKEVKRKNNKKKPSVDSDVEDINLDSTND 209
Query: 496 G--PNSPKVLAEPAVTNQTG 513
G K +E + T + G
Sbjct: 210 GKKKRKKKKQSEDSETEENG 229
>At4g32610.1 68417.m04643 mitochondrial glycoprotein family protein
/ MAM33 family protein low similarity to SP|P40513
Mitochondrial acidic protein MAM33, mitochondrial
precursor {Saccharomyces cerevisiae}; contains Pfam
profile PF02330: Mitochondrial glycoprotein
Length = 557
Score = 31.5 bits (68), Expect = 3.4
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 361 ERRPSQRFARRQSHVLREREKQNSTKSEVNPSETNDETHNNSAETATISPASDV-DALSR 419
E++ + + S ++++KQ K + ++N + + SAE S + DV + L +
Sbjct: 208 EKKENTTGESKASKKKKKKDKQKELKESQSEVKSNSDAASESAEQEESSSSIDVKERLKK 267
Query: 420 KSSAKSQKSNVEPD 433
+S K +KS+ E D
Sbjct: 268 IASMKKKKSSKEVD 281
>At4g25880.2 68417.m03722 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 852
Score = 31.5 bits (68), Expect = 3.4
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 17/188 (9%)
Query: 325 PSARQNFFRMGSRFQYSGKTEYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNS 384
PS++ + R+ S Y TEYQ NR R R +Q + S + + K S
Sbjct: 72 PSSKHSLNRIPSPPIYY-PTEYQFID-NRVGRF-----RSNQGLNKVNSPIHLSQGKL-S 123
Query: 385 TKSEVNPSETNDETHNNSAETAT------ISPASDVDALSRKSSAKSQKSNVEPDLLDTQ 438
T EV+ E++ + NS T +SP S A R+ S ++ +
Sbjct: 124 THKEVSEDESSQQLSVNSVSDRTDGLDIRLSPGSQSLADFRQDDTSSGQTPQHSRSNSSN 183
Query: 439 NDTKLSSVSDHVAEPKDSFTSINEQSKISRILKGNNGLKLSDLDTKISSETTNGNVSGPN 498
+ + S + +E D + + +R GN K D T I S+ + N+SGP
Sbjct: 184 GEVNTADESGNFSELSDDVVVKDNAASTARASIGNE--KSPDEST-IISKMKSTNISGPG 240
Query: 499 SPKVLAEP 506
+ K EP
Sbjct: 241 TAKYPREP 248
>At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 861
Score = 31.5 bits (68), Expect = 3.4
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 17/188 (9%)
Query: 325 PSARQNFFRMGSRFQYSGKTEYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNS 384
PS++ + R+ S Y TEYQ NR R R +Q + S + + K S
Sbjct: 72 PSSKHSLNRIPSPPIYY-PTEYQFID-NRVGRF-----RSNQGLNKVNSPIHLSQGKL-S 123
Query: 385 TKSEVNPSETNDETHNNSAETAT------ISPASDVDALSRKSSAKSQKSNVEPDLLDTQ 438
T EV+ E++ + NS T +SP S A R+ S ++ +
Sbjct: 124 THKEVSEDESSQQLSVNSVSDRTDGLDIRLSPGSQSLADFRQDDTSSGQTPQHSRSNSSN 183
Query: 439 NDTKLSSVSDHVAEPKDSFTSINEQSKISRILKGNNGLKLSDLDTKISSETTNGNVSGPN 498
+ + S + +E D + + +R GN K D T I S+ + N+SGP
Sbjct: 184 GEVNTADESGNFSELSDDVVVKDNAASTARASIGNE--KSPDEST-IISKMKSTNISGPG 240
Query: 499 SPKVLAEP 506
+ K EP
Sbjct: 241 TAKYPREP 248
>At4g03565.1 68417.m00490 expressed protein
Length = 263
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 865 EKGDEQDSETGEERNEDDFDEDID 888
E+GDE D E+ EE ++DD D + D
Sbjct: 49 EEGDEYDGESNEEEDDDDDDNESD 72
>At3g57780.1 68416.m06436 expressed protein
Length = 670
Score = 31.5 bits (68), Expect = 3.4
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 342 GKTEYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNPSETNDETHNN 401
G+T + Q NR+ + + +++P + ++S E+E+ +TK E N S D+T
Sbjct: 3 GRTTNNSVQSNRSTKNGKRDQKPQKTNGAKRSS---EQERLKATKEESNVSVVVDDT--- 56
Query: 402 SAETATISPASDVDALSRKSSAKSQKSNVEPDLL---DTQNDTKLSSVSDHVAEPK-DSF 457
T + D D SS K++K L + + + + S D +A K DS
Sbjct: 57 ---TTQSKLSDDDDHAVNDSSEKTEKEETINGLACDDEDEEEKEESKELDAIAHEKTDSV 113
Query: 458 TS 459
+S
Sbjct: 114 SS 115
>At3g54060.1 68416.m05977 hypothetical protein mucin MUC3, Homo
sapiens, EMBL:AF007193
Length = 456
Score = 31.5 bits (68), Expect = 3.4
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 368 FARRQSHVLREREKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALS-RKSSAKSQ 426
F Q H +K NS++ EV P+ TN + E TISP + + S +S S
Sbjct: 254 FRTPQKHASSGSDKSNSSQKEVTPTNTNCTI--VTKERFTISPLKQITSYSVERSHLISF 311
Query: 427 KSNVEPDLLDTQNDTKLSSVSDHV 450
S V+ +L K+S+ DHV
Sbjct: 312 SSPVKSNL-------KMSNKRDHV 328
>At2g20020.1 68415.m02340 expressed protein
Length = 701
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 840 DLKKKTTRFLCTR-----LKIYLFANRTIFEKGDEQDSETGEERNEDDFDED 886
DL+ K++ + +R + +F R + E+G+ ++ E G ++ D+F ED
Sbjct: 630 DLEAKSSNVVVSRNASKSSNVVVFGKREVAERGEREEKEEGSKKKMDEFAED 681
>At2g41550.1 68415.m05135 expressed protein
Length = 475
Score = 31.1 bits (67), Expect = 4.5
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 379 REKQNSTKSEVNPSETNDETHNNSA-ETATISPASDVDALSRKSSAKSQKSNVEPDLLDT 437
R+ N ++ P ET H +A + T+ A D D SS+ +S ++ +
Sbjct: 142 RDSSNDDTEDIEP-ETRLMPHETAANDPLTVEVAEDADT----SSSPVLESKID----EA 192
Query: 438 QNDTKLSSVSDHVAEPKDSFTSINEQSKISRILKGNNGLKLSDLDTKISSETTN 491
+ + S V+D V +P S ISR G + L+ L+T+ + TT+
Sbjct: 193 EEHSCSSLVTDQVFDPIKQALENKSSSAISRESIGGSTLRPLHLETREKANTTD 246
>At5g19260.1 68418.m02293 expressed protein various predicted
proteins
Length = 288
Score = 30.7 bits (66), Expect = 5.9
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 386 KSEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKSNVEPDLLDTQNDTKLSS 445
KS + S ++T N + + A SP SD S S S S+ T+ T
Sbjct: 40 KSHLLDSSHAEDTRNRNDDKAAASPVSDSSGWSSLQSLSSGSSS------STKTTTSSEK 93
Query: 446 VSDHVAEPKDSFTSINEQS--KISRILKGNNGLKLSDLDTKISSETTNGNV 494
S + + S ++++QS + L +G ++D+D S + N+
Sbjct: 94 ESSYYVQRPSSCRALSDQSLALCTENLGSESGSDVTDIDELFSLDVQTKNL 144
>At3g56150.1 68416.m06241 eukaryotic translation initiation factor 3
subunit 8 / eIF3 p110 / eIF3c / p105 (TIF3C1) nearly
identical to SP|O49160 Eukaryotic translation initiation
factor 3 subunit 8 (eIF3 p110) (eIF3c) (p105)
{Arabidopsis thaliana}
Length = 900
Score = 30.7 bits (66), Expect = 5.9
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 19/213 (8%)
Query: 370 RRQSHVLREREKQNSTKSEVNPSETNDETHNNSAETATISPASDVD----------ALSR 419
R V E++ ++ + + E D+ ++S + T+ P SDVD LS+
Sbjct: 163 REAPEVEEEKQPEDDDDDDDDDDEVEDDD-DSSIDGPTVDPGSDVDEPTDNLTWEKMLSK 221
Query: 420 KSSAKSQKSNVEPDLL--DTQNDTKLSSVSDHVAEPKDSFTSINEQSKISRILKGNNGLK 477
K + N +P + D N V+ + F +++ + +++I K K
Sbjct: 222 KDKLLEKLMNKDPKEITWDWVNKKFKEIVAARGKKGTARFELVDQLTHLTKIAK-TPAQK 280
Query: 478 LSDLDTKISSE-TTNGNVSGPNSPKVLAEPAVTNQTGSAYVSIVVVEPNQQVANKILPTK 536
L L + IS++ N +SG + P + + V N + I+V N V + + P +
Sbjct: 281 LEILFSVISAQFDVNPGLSG-HMPINVWKKCVLNML--TILDILVKYSNIVVDDTVEPDE 337
Query: 537 -QTEKKEEITPKLHTMSALSPWLDTPDLPFLES 568
+T K + K+ L +L+ D F +S
Sbjct: 338 NETSKPTDYDGKIRVWGNLVAFLERVDTEFFKS 370
>At2g07260.1 68415.m00833 hypothetical protein
Length = 300
Score = 30.7 bits (66), Expect = 5.9
Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 6/179 (3%)
Query: 378 EREKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKSNVEPDLLDT 437
E ++ K E P E N E H+ ET + +A ++K + +P +T
Sbjct: 68 EEMEREEGKEEKVPKEENVEEHDEHDETEDQEAYVILSDDEDNGTAPTEKES-QPQKEET 126
Query: 438 QNDTKLSSVSDH----VAEPKDSFTSINEQSKISRILKGNNGLKLSDLDTKISSETTNGN 493
K +V +H E ++++ +++ + TK+ ET +
Sbjct: 127 TEVPKEENVEEHDEYDETEDQEAYVILSDDEGNGTAPTEKESQPQKEETTKVPKETKKDD 186
Query: 494 VSGPNSPKVLAEPAVTNQTGSAYVSIVVVEPNQQVANKI-LPTKQTEKKEEITPKLHTM 551
+P E +T S + V +Q+V +I L K+ K + I L ++
Sbjct: 187 EDVNQTPLSTQEEEITQGQSSLQTPLTPVMLSQEVMEEIDLKVKKWAKNKLIRDLLSSL 245
>At2g04495.1 68415.m00454 expressed protein
Length = 202
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 663 KKLYILAVEQNISKQREIVKALGRIVGSGMFTCIPPEDAFLIPEIDQRI 711
KK+ L E+++SK+ E + GR+V +F I E+ L+ E+D+ I
Sbjct: 106 KKVVALLEEKSVSKEEEEEEEGGRVV---LFRGIEEEEVSLVVEVDEEI 151
>At1g65660.1 68414.m07450 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 535
Score = 30.7 bits (66), Expect = 5.9
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 532 ILPTKQTEKKEEITPKLHTMSALSPWLDTPDLPFLESDFRKRKPHPNY-KIHYDIENDVI 590
+ P + E +EI P + + +PW + P L+ RK K PNY K YD I
Sbjct: 28 LAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQ-RKWKSDPNYTKSWYD-RGAKI 85
Query: 591 AIARKYK 597
A KY+
Sbjct: 86 FQAEKYR 92
>At1g61215.1 68414.m06898 DNA-binding bromodomain-containing protein
contains Pfam profile PF00439: Bromodomain
Length = 475
Score = 30.7 bits (66), Expect = 5.9
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 343 KTEYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNP--SETNDETHN 400
K +Y+ ++ FE +R A ++ +L+ + S +S++ SE+NDE H
Sbjct: 56 KAKYKDLRKRYVGCKAWFEELKKKRVAELKAALLKSEDSIGSLESKLQSLKSESNDECHQ 115
Query: 401 N---SAETATISPA 411
N S+ T ++ P+
Sbjct: 116 NNYDSSRTLSLEPS 129
>At1g29470.1 68414.m03605 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 30.7 bits (66), Expect = 5.9
Identities = 22/109 (20%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 335 GSRFQYSGKTEYQT-TQQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNPSE 393
G R G+ + ++ + + + + Q E S+ S+ E ++ +E E
Sbjct: 127 GDRKNGDGEKDTESESDETKQKEKTQLEES-SEENKSEDSNGTEENAGESEENTEKKSEE 185
Query: 394 TNDETHNNSAETATISPASDVDALSRKSSAKSQKSNVEPDLLDTQNDTK 442
ET ++ ++ + PA D ++++SS S + + L+++QN+ K
Sbjct: 186 NAGETEESTEKSKDVFPAGDQAEITKESSTGSGAWSTQ--LVESQNEKK 232
>At5g53620.2 68418.m06662 expressed protein
Length = 682
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 369 ARRQSHVLREREKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKS 428
A R L E E+ + ++E E + E H + + K A ++
Sbjct: 122 AARMQEQLHENER-SIREAERKLEEKDRELHAIKLDNEAAWAKEGILREQNKELATFRRE 180
Query: 429 NVEPDLLDTQNDTKLSSVSDHVAEPKDSFTSINEQSKISR 468
+ +QN K+S + +H+ E + + + EQ++I++
Sbjct: 181 RDHSEAERSQNIHKISELQEHIQEKESQLSELQEQNRIAQ 220
>At5g53620.1 68418.m06661 expressed protein
Length = 682
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 369 ARRQSHVLREREKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKSQKS 428
A R L E E+ + ++E E + E H + + K A ++
Sbjct: 122 AARMQEQLHENER-SIREAERKLEEKDRELHAIKLDNEAAWAKEGILREQNKELATFRRE 180
Query: 429 NVEPDLLDTQNDTKLSSVSDHVAEPKDSFTSINEQSKISR 468
+ +QN K+S + +H+ E + + + EQ++I++
Sbjct: 181 RDHSEAERSQNIHKISELQEHIQEKESQLSELQEQNRIAQ 220
>At5g39840.1 68418.m04828 ATP-dependent RNA helicase, mitochondrial,
putative similar to mitochondrial RNA helicase
[Arabidopsis thaliana] GI:5823579; contains Pfam profile
PF00271: Helicase conserved C-terminal domain
Length = 776
Score = 30.3 bits (65), Expect = 7.8
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 847 RFLCTRL-KIYLFANRTIFEKGDEQDSETGEERNEDDFDED--IDLYSNVLKKLLPDIVV 903
RF C + K+ F++ T+ G+ D E DD+DE+ I+ S+V + LL D VV
Sbjct: 65 RFGCFEIGKVRSFSS-TVDNNGENDDIEESVGSESDDYDEEGLINELSDVDEGLLNDSVV 123
Query: 904 SLEASDDFICEKAMRQPEGDERLDEEIVLKRLNEFRAGDMRDITPLNFFDEL 955
A D I +A R ++R + + L R E R ++R + +D L
Sbjct: 124 ---AETDEIGSEAARAL--NDRYHDPVELYR--ELRGSEVRSKLQHSEWDSL 168
>At5g36030.1 68418.m04340 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; simlar to At4g19310, At5g36030
Length = 355
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 312 YHTFFRL-RAPVKGPSARQNFFRMGSRFQYSGKTEYQTTQQNRARRTVQFERRPSQRFAR 370
+HT + + P P+ N + G Y Q N + + R P Q F
Sbjct: 30 FHTSSKADKEPQSSPTHSPNIVGTRNELVPIGLILYLPVQDNNSEHSNSTAREPDQYFEL 89
Query: 371 RQSHVLREREKQNSTKSE 388
S R REK N +++E
Sbjct: 90 SDSSPARNREKPNLSQAE 107
>At3g29710.1 68416.m03745 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 669
Score = 30.3 bits (65), Expect = 7.8
Identities = 22/101 (21%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 869 EQDSETGEERNEDDFDEDIDLYSNVLKKLLPDIVVSLEASDDFICEKAMRQPEGDERLDE 928
++++ET +E + E+ + + L + + S E+ +D EK++ ++ DE
Sbjct: 132 DEETETNKELACANPVEEAERQDDGLTVIEEEEERSSESDEDVNVEKSVEDEGHEDERDE 191
Query: 929 EIVLKRLNEFRAGDMRDITPLNFFDELDIHPL--VVPVKEH 967
++++++ E R D DI ++ + + + PL PV E+
Sbjct: 192 DVIVEKSGEERTID-EDIANVDMEEAMAMQPLGMYFPVSEY 231
>At2g38250.1 68415.m04697 DNA-binding protein-related contains
similarity to DNA-binding protein GI:170271 from
[Nicotiana tabacum]
Length = 289
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 416 ALSRKSSAKSQKSNVEPDLLDTQNDTKLSSVSDHVAEP-KDSFTSINEQSKISRILK 471
A R+ S+ ++ NV +L+D ND K+ + ++A+ K S N + + +L+
Sbjct: 149 ARKREYSSDEEEENVNEELVDVSNDPKILNPKKNIAKKRKGGSNSSNSNNGVREVLE 205
>At2g17150.1 68415.m01980 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 909
Score = 30.3 bits (65), Expect = 7.8
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 340 YSGKTEYQTTQQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNPSETNDETH 399
Y+ E + + +++ +PS A+ + ++ E E S S + S +
Sbjct: 683 YTSFPELNSPNMSSNGPSLKSNEQPSHLNAQTDNGIMAE-ENPRSPSSSCSKSSGSS--- 738
Query: 400 NNSAETATISPASDVDALSRKSSAKSQKSNVEPD 433
NN+ T I A D DA+ +++ +++Q NV +
Sbjct: 739 NNNENTGNILVAEDADAVLKRAHSEAQLHNVNQE 772
>At2g03140.1 68415.m00267 CAAX amino terminal protease family protein
very low similarity to SP|Q40863 Late embryogenesis
abundant protein EMB8 from Picea glauca; contains Pfam
profile PF02517 CAAX amino terminal protease family
protein
Length = 1805
Score = 30.3 bits (65), Expect = 7.8
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 5/148 (3%)
Query: 350 QQNRARRTVQFERRPSQRFARRQSHVLREREKQNSTKSEVNPSETNDETHNNSAETATIS 409
QQ R T + + Q A Q+ V + ++ KS + DE+++ S ET +
Sbjct: 863 QQQRKDETSKSDENAKQS-ATDQNKVTSTDNEGDAGKSSASQPVEKDESNDQSKETKVMQ 921
Query: 410 PASD--VDALSRKSSAKSQKSNVEPDLLDTQNDTKLSSVSDHVAEPKDSFTSINEQSKIS 467
P SD A+ + S L + T++ +V+ ++ + ++E+ K
Sbjct: 922 PVSDQTKPAIQEPNQPNFNVSQAFEALTGMDDSTQV-AVNSVFGVLENMISQLDEEKKEG 980
Query: 468 RILKGNNGLKLSDLDTKISSETTNGNVS 495
+ LK + + K + TN VS
Sbjct: 981 NEVSDEKNLK-DEKNLKDAKNVTNEVVS 1007
>At1g77270.1 68414.m08999 expressed protein
Length = 682
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 378 EREKQNSTKSEVNPSETNDETHNNSAETATISPASDVDALSRKSSAKS--QKSNVEPDLL 435
E ++S K E+ DE + AS DAL++K+ KS K+ + +++
Sbjct: 42 EENAKSSVKMEIKTESNIDEVCGKMMDLCVERNASKDDALAKKNPKKSAVAKTILNKEII 101
Query: 436 DTQNDTKLSSV 446
+ ++DT V
Sbjct: 102 EIESDTDTDEV 112
>At1g48980.1 68414.m05491 hypothetical protein
Length = 264
Score = 30.3 bits (65), Expect = 7.8
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 411 ASDVDALSRKSSAKSQKSNVEPDLLDTQNDTKLSSVSDHVAEPKDSFTSINEQSKISR 468
AS V+ LS++ +SQ+ V D + +LS DH +++F S E K+SR
Sbjct: 15 ASKVNLLSKR--IRSQEQEVAVDFSHMTLEDELSEEEDHKDSSREAFGSSLENHKLSR 70
>At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF05285:
SDA1 domain; similar to mystery 45A
(GI:16797816){Drosophila melanogaster}
Length = 804
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 857 LFANRTIFEKGDEQDSETGEERNEDDFDEDIDLYSNVLKKLLP-DIVVSLEASDDFICEK 915
+F+N E E D+E+G + ++DD ++ + +V ++L+P D +A +D
Sbjct: 510 VFSNVPNVELLQESDNESGSDGDQDDDGVELPIGDDVEQELIPGDCGSEDKAEEDSNDGD 569
Query: 916 AMRQPEGDERLDEEI 930
M E D +D I
Sbjct: 570 DMNNTEDDSDIDTSI 584
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.134 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,910,033
Number of Sequences: 28952
Number of extensions: 1037693
Number of successful extensions: 3922
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 3862
Number of HSP's gapped (non-prelim): 106
length of query: 1156
length of database: 12,070,560
effective HSP length: 89
effective length of query: 1067
effective length of database: 9,493,832
effective search space: 10129918744
effective search space used: 10129918744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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