GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000350-TA|BGIBMGA000350-PA|undefined
         (142 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.79 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   1.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   1.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   2.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   2.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   2.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 7/18 (38%), Positives = 13/18 (72%)

Query: 102 MLTNIALDYFHYIELMFC 119
           +L  + + YF+Y+ L+FC
Sbjct: 252 LLLLVCIYYFYYMHLLFC 269


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)

Query: 70  WPLGSIFL--WAILRSSVGQRPVIGTIIGV-TTGAML 103
           W +    L  WA++   + Q   + TI+G  T G M+
Sbjct: 219 WSMSGTMLVPWALMEQPLAQTKKLATIVGCGTDGTMI 255


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)

Query: 70  WPLGSIFL--WAILRSSVGQRPVIGTIIGV-TTGAML 103
           W +    L  WA++   + Q   + TI+G  T G M+
Sbjct: 219 WSMSGTMLVPWALMEQPLAQTKKLATIVGCGTDGTMI 255


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)

Query: 70  WPLGSIFL--WAILRSSVGQRPVIGTIIGVTT 99
           W +    L  WA++   + Q   + TI+G  T
Sbjct: 219 WSMSGTMLVPWALMEQPLAQTKKLATIVGCGT 250


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)

Query: 70  WPLGSIFL--WAILRSSVGQRPVIGTIIGVTT 99
           W +    L  WA++   + Q   + TI+G  T
Sbjct: 219 WSMSGTMLVPWALMEQPLAQTKKLATIVGCGT 250


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)

Query: 70  WPLGSIFL--WAILRSSVGQRPVIGTIIGVTT 99
           W +    L  WA++   + Q   + TI+G  T
Sbjct: 219 WSMSGTMLVPWALMEQPLAQTKKLATIVGCGT 250


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.141    0.461 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,876
Number of Sequences: 317
Number of extensions: 1373
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 142
length of database: 114,650
effective HSP length: 51
effective length of query: 91
effective length of database: 98,483
effective search space:  8961953
effective search space used:  8961953
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.2 bits)
S2: 39 (19.8 bits)